Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00067 Eucalyptus grandis HOM05D006964 ORTHO05D008861 9.7e-74 280.0 138 100.0
Eucgr.A00951 Eucalyptus grandis HOM05D006964 ORTHO05D008861 4.7e-52 208.0 146 75.3
Atru.chr8.1035 Acer truncatum HOM05D006964 ORTHO05D008861 1.4e-51 206.5 146 74.0
Ciclev10011398m.g Citrus clementina HOM05D006964 ORTHO05D008861 3.0e-51 205.3 146 73.3
TPR.G35899 Trifolium pratense HOM05D006964 ORTHO05D008861 3.0e-51 205.3 146 73.3
Ca_06492_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 6.7e-51 204.1 146 72.6
CsaV3_4G007230 Cucumis sativus L. HOM05D006964 ORTHO05D008861 1.1e-50 203.4 146 72.6
ClCG07G011010 Citrullus lanatus HOM05D006964 ORTHO05D008861 1.5e-50 203.0 146 73.3
LjContig00081g0000792 Lotus japonicus HOM05D006964 ORTHO05D008861 1.5e-50 203.0 146 73.3
Medtr5g098850 Medicago truncatula HOM05D006964 ORTHO05D008861 1.5e-50 203.0 146 71.9
Sed0000140 Sechium edule HOM05D006964 ORTHO05D008861 1.5e-50 203.0 146 72.6
Potri.011G023800 Populus trichocarpa HOM05D006964 ORTHO05D008861 2.0e-50 202.6 146 71.9
COL.COLO4_20003 Corchorus olitorius HOM05D006964 ORTHO05D008861 9.7e-50 200.3 147 73.5
Sabra11G0014800 Salix brachista HOM05D006964 ORTHO05D008861 1.3e-49 199.9 146 70.5
Glyma.14G003100 Glycine max HOM05D006964 ORTHO05D008861 1.7e-49 199.5 146 71.2
Lalb_Chr10g0101591 Lupinus albus HOM05D006964 ORTHO05D008861 2.8e-49 198.7 146 69.9
arahy.Tifrunner.gnm1.ann1.EIVX2Z Arachis hypogaea HOM05D006964 ORTHO05D008861 3.7e-49 198.4 146 70.5
Gohir.A08G050700 Gossypium hirsutum HOM05D006964 ORTHO05D008861 3.7e-49 198.4 147 72.1
Gohir.D08G060500 Gossypium hirsutum HOM05D006964 ORTHO05D008861 3.7e-49 198.4 147 72.1
arahy.Tifrunner.gnm1.ann1.3RSR9Y Arachis hypogaea HOM05D006964 ORTHO05D008861 6.3e-49 197.6 146 70.5
QL04p064712 Quercus lobata HOM05D006964 ORTHO05D008861 8.2e-49 197.2 146 71.2
QL04p064780 Quercus lobata HOM05D006964 ORTHO05D008861 1.1e-48 196.8 146 70.5
Gorai.004G062600 Gossypium raimondii HOM05D006964 ORTHO05D008861 2.4e-48 195.7 147 71.4
Psat2g001680 Pisum sativum HOM05D006964 ORTHO05D008861 3.1e-48 195.3 146 69.9
Phvul.008G290000 Phaseolus vulgaris HOM05D006964 ORTHO05D008861 5.3e-48 194.5 146 67.8
Thecc.01G176000 Theobroma cacao HOM05D006964 ORTHO05D008861 7.0e-48 194.1 147 70.7
CAN.G843.21 Capsicum annuum HOM05D006964 ORTHO05D008861 1.2e-47 193.4 146 67.8
Manes.16G000700 Manihot esculenta HOM05D006964 ORTHO05D008861 1.6e-47 193.0 146 68.5
Cpa.g.sc332.3 Carica papaya HOM05D006964 ORTHO05D008861 2.0e-47 192.6 146 69.9
PGR031G2089 Punica granatum HOM05D006964 ORTHO05D008861 2.0e-47 192.6 146 68.5
AL1G40630 Arabidopsis lyrata HOM05D006964 ORTHO05D008861 2.9e-46 188.7 146 67.1
PGSC0003DMG400014180 Solanum tuberosum HOM05D006964 ORTHO05D008861 2.9e-46 188.7 146 66.4
Nn7g38387 Nelumbo nucifera HOM05D006964 ORTHO05D008861 1.1e-45 186.8 146 68.5
Cfa016256 Carpinus fangiana HOM05D006964 ORTHO05D008861 1.5e-45 186.4 148 68.2
Haze_00006 Corylus avellana HOM05D006964 ORTHO05D008861 1.5e-45 186.4 148 68.2
Nitab4.5_0000663g0200 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.5e-45 186.4 147 66.7
Nitab4.5_0002450g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.5e-45 186.4 147 67.3
AT1G24290 Arabidopsis thaliana HOM05D006964 ORTHO05D008861 1.9e-45 186.0 146 67.1
Cc11_g00270 Coffea canephora HOM05D006964 ORTHO05D008861 1.9e-45 186.0 145 67.6
FvH4_5g33930 Fragaria vesca HOM05D006964 ORTHO05D008861 1.9e-45 186.0 144 64.6
FAN08G0714 Fragaria x ananassa HOM05D006964 ORTHO05D008861 1.9e-45 186.0 144 64.6
FAN18G1087 Fragaria x ananassa HOM05D006964 ORTHO05D008861 2.5e-45 185.7 144 63.9
SHI28197 Sapria himalayana HOM05D006964 ORTHO05D008861 2.5e-45 185.7 146 67.1
Carub.0001s2577 Capsella rubella HOM05D006964 ORTHO05D008861 3.2e-45 185.3 146 65.8
Peaxi162Scf00314g00515 Petunia axillaris HOM05D006964 ORTHO05D008861 3.2e-45 185.3 147 66.7
RcHm_v2.0_Chr7g0233321 Rosa chinensis HOM05D006964 ORTHO05D008861 4.2e-45 184.9 146 65.1
SalBow7G2824 Salvia bowleyana HOM05D006964 ORTHO05D008861 4.2e-45 184.9 146 65.8
CiPaw.05G264600 Carya illinoinensis HOM05D006964 ORTHO05D008861 5.5e-45 184.5 144 64.6
Sopen03g037220 Solanum pennellii HOM05D006964 ORTHO05D008861 5.5e-45 184.5 146 65.1
THA.LOC104827506 Tarenaya hassleriana HOM05D006964 ORTHO05D008861 5.5e-45 184.5 148 65.5
TAR464G0001 Trochodendron aralioides HOM05D006964 ORTHO05D008861 7.2e-45 184.1 148 66.9
HanXRQChr11g0342451 Helianthus annuus HOM05D006964 ORTHO05D008861 9.4e-45 183.7 144 65.3
A07p12030 Brassica napus HOM05D006964 ORTHO05D008861 1.2e-44 183.3 146 66.4
BraA07t28989Z Brassica rapa HOM05D006964 ORTHO05D008861 1.2e-44 183.3 146 66.4
Nitab4.5_0000660g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.2e-44 183.3 147 65.3
Nitab4.5_0004302g0010 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.6e-44 183.0 147 66.0
Sc07g0001890 Simmondsia chinensis HOM05D006964 ORTHO05D008861 2.1e-44 182.6 144 64.6
GSVIVG01015905001 Vitis vinifera HOM05D006964 ORTHO05D008861 2.1e-44 182.6 145 66.2
Actinidia35156 Actinidia chinensis HOM05D006964 ORTHO05D008861 2.7e-44 182.2 145 65.5
MBI18_g18636_MAGBIO Magnolia biondii HOM05D006964 ORTHO05D008861 2.7e-44 182.2 146 65.1
CARHR026810 Cardamine hirsuta HOM05D006964 ORTHO05D008861 4.7e-44 181.4 146 63.7
Lsat_1_v5_gn_1_40040 Lactuca sativa HOM05D006964 ORTHO05D008861 4.7e-44 181.4 146 63.7
Solyc03g118320.1 Solanum lycopersicum HOM05D006964 ORTHO05D008861 8.0e-44 180.6 146 64.4
BcaC06g35275 Brassica carinata HOM05D006964 ORTHO05D008861 1.0e-43 180.3 146 65.8
BolC7t42303H Brassica oleracea HOM05D006964 ORTHO05D008861 1.0e-43 180.3 146 65.8
MD03G1299000 Malus domestica HOM05D006964 ORTHO05D008861 1.0e-43 180.3 148 64.2
ECA234G0414 Erigeron canadensis HOM05D006964 ORTHO05D008861 1.4e-43 179.9 146 64.4
CDE02G0076 Ceratophyllum demersum HOM05D006964 ORTHO05D008861 1.8e-43 179.5 144 63.2
Aa31LG7G9960 Aethionema arabicum HOM05D006964 ORTHO05D008861 3.0e-43 178.7 146 63.0
C07p17970 Brassica napus HOM05D006964 ORTHO05D008861 4.0e-43 178.3 146 65.1
Oeu061991.1 Olea europaea HOM05D006964 ORTHO05D008861 4.0e-43 178.3 147 62.6
Sp1g23470 Schrenkiella parvula HOM05D006964 ORTHO05D008861 4.0e-43 178.3 146 65.1
vmacro11021 Vaccinium macrocarpon HOM05D006964 ORTHO05D008861 4.0e-43 178.3 147 64.6
BcaB03g13997 Brassica carinata HOM05D006964 ORTHO05D008861 5.2e-43 177.9 146 64.4
Thhalv10009719m.g Eutrema salsugineum HOM05D006964 ORTHO05D008861 5.2e-43 177.9 146 65.1
SGA_v2.0_scaffold73G24408 Striga asiatica HOM05D006964 ORTHO05D008861 5.2e-43 177.9 147 63.3
Dinv35124 Davidia involucrata HOM05D006964 ORTHO05D008861 8.8e-43 177.2 145 63.4
Hma1.2p1_0391F.1_g142860 Hydrangea macrophylla HOM05D006964 ORTHO05D008861 1.5e-42 176.4 148 62.8
unitig_699.g19570 Utricularia gibba HOM05D006964 ORTHO05D008861 2.6e-42 175.6 145 60.7
Lj1C622G7 Lonicera japonica HOM05D006964 ORTHO05D008861 5.7e-42 174.5 145 63.4
EL10Ac6g15329 Beta vulgaris HOM05D006964 ORTHO05D008861 9.8e-42 173.7 146 61.0
Lj1A623T74 Lonicera japonica HOM05D006964 ORTHO05D008861 9.8e-42 173.7 145 63.4
PSO677G0001 Papaver somniferum HOM05D006964 ORTHO05D008861 9.8e-42 173.7 146 62.3
Rhsim02G0171800 Rhododendron simsii HOM05D006964 ORTHO05D008861 9.8e-42 173.7 147 64.6
Aqoxy7G03560 Aquilegia oxysepala HOM05D006964 ORTHO05D008861 1.7e-41 172.9 146 63.0
AUR62017863 Chenopodium quinoa HOM05D006964 ORTHO05D008861 2.8e-41 172.2 146 61.0
Ah.02g121270 Amaranthus hybridus HOM05D006964 ORTHO05D008861 4.8e-41 171.4 146 61.0
AUR62003549 Chenopodium quinoa HOM05D006964 ORTHO05D008861 1.8e-40 169.5 146 59.6
ATR0763G192 Amborella trichopoda HOM05D006964 ORTHO05D008861 2.4e-40 169.1 147 59.9
SEGI_30607 Sequoiadendron giganteum HOM05D006964 ORTHO05D008861 1.5e-37 159.8 145 57.9
SMO116G0181 Selaginella moellendorffii HOM05D006964 ORTHO05D008861 1.2e-36 156.8 147 59.2
HPP92_016414 Vanilla planifolia HOM05D006964 ORTHO05D008861 1.2e-36 156.8 129 62.8
Mapoly0100s0005 Marchantia polymorpha HOM05D006964 ORTHO05D008861 1.0e-35 153.7 147 59.9
Pp3c24_11680 Physcomitrium patens HOM05D006964 ORTHO05D008861 1.2e-31 140.2 144 56.2
Pp3c23_21270 Physcomitrium patens HOM05D006964 ORTHO05D008861 1.2e-26 123.6 144 49.3
DCAR_005902 Daucus carota HOM05D006964 ORTHO05D008861 3.4e-26 122.1 144 47.9
Cfa024934 Carpinus fangiana HOM05D006964 ORTHO05D008861 1.2e-20 103.6 146 41.8
HPP92_016337 Vanilla planifolia HOM05D006964 ORTHO05D008861 4.4e-18 95.1 55 81.8
Ca_28576_v3 Cicer arietinum L. HOM05D006964 ORTHO05D008861 1.3e-17 93.6 147 38.8
Haze_26752 Corylus avellana HOM05D006964 ORTHO05D008861 2.2e-17 92.8 146 39.7
Nitab4.5_0000843g0040 Nicotiana tabacum HOM05D006964 ORTHO05D008861 1.9e-16 89.7 55 78.2
Nn1g06845 Nelumbo nucifera HOM05D006964 ORTHO05D008861 4.1e-16 88.6 91 54.9
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 1.6e-15 86.7 117 42.7
PGSC0003DMG400021041 Solanum tuberosum HOM05D006964 ORTHO05D008861 3.0e-14 82.4 80 60.0
SEGI_03426 Sequoiadendron giganteum HOM05D006964 ORTHO05D008861 1.6e-12 76.6 90 50.0
Actinidia18866 Actinidia chinensis HOM05D006964 ORTHO05D008861 1.8e-11 73.2 71 53.5
MD11G1318300 Malus domestica HOM05D006964 ORTHO05D008861 4.0e-11 72.0 52 59.6
Pp3c7_25960 Physcomitrium patens HOM05D006964 ORTHO05D008861 8.6e-06 54.3 71 43.7


User provided reference genes

Program Settings