Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 1.8e-190 669.1 336 100.0
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.5e-141 506.5 336 74.1
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 9.4e-139 497.3 336 74.7
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 2.1e-138 496.1 336 72.6
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 8.2e-135 484.2 335 69.9
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 1.1e-134 483.8 337 70.9
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 3.1e-134 482.3 331 71.6
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 9.1e-134 480.7 338 71.3
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.5e-133 479.9 335 70.1
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.3e-132 476.9 335 69.9
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 2.9e-132 475.7 332 71.1
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 6.5e-132 474.6 336 69.6
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 1.1e-131 473.8 335 69.6
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.1e-131 473.8 336 69.0
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.4e-131 473.4 336 70.5
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.9e-131 473.0 335 69.3
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 4.2e-131 471.9 336 69.3
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 7.2e-131 471.1 336 68.2
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 2.1e-130 469.5 335 69.3
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 2.7e-130 469.2 336 69.3
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 3.6e-130 468.8 336 69.6
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 4.7e-130 468.4 329 70.8
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 2.3e-129 466.1 330 69.7
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 3.0e-129 465.7 337 69.7
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 8.8e-129 464.2 336 68.5
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 3.3e-128 462.2 359 64.9
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 7.4e-128 461.1 331 68.6
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 7.4e-128 461.1 336 67.6
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 9.7e-128 460.7 336 67.9
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.1e-126 457.2 377 61.3
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.4e-126 456.8 332 70.2
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 1.4e-126 456.8 336 67.0
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 3.5e-125 452.2 336 68.5
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 1.0e-124 450.7 331 68.0
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 1.3e-124 450.3 337 66.8
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.7e-124 449.9 337 65.9
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 1.7e-124 449.9 336 67.9
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 2.9e-124 449.1 338 68.0
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 5.0e-124 448.4 333 66.7
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.1e-123 447.2 337 66.5
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 1.5e-123 446.8 333 69.1
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 1.5e-123 446.8 331 68.3
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 4.2e-123 445.3 336 67.6
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 2.7e-122 442.6 330 66.4
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 8.0e-122 441.0 337 65.3
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.4e-121 440.3 344 65.1
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.4e-121 440.3 337 65.0
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 2.3e-121 439.5 337 65.0
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 2.0e-120 436.4 337 65.9
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 3.3e-120 435.6 334 66.5
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 3.3e-120 435.6 336 65.2
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 1.7e-119 433.3 336 63.7
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 2.2e-119 433.0 335 66.0
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 1.1e-118 430.6 334 65.3
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 9.1e-118 427.6 339 62.2
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 3.5e-117 425.6 338 64.5
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 3.5e-117 425.6 338 64.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 1.0e-116 424.1 331 64.4
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 2.9e-116 422.5 332 64.5
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 1.5e-115 420.2 332 64.5
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 5.5e-115 418.3 336 62.5
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 2.1e-114 416.4 323 67.2
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 2.7e-114 416.0 332 65.7
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 2.2e-111 406.4 332 61.7
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.4e-110 403.7 331 60.1
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 2.0e-109 399.8 330 59.1
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 6.6e-108 394.8 334 60.8
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 1.1e-107 394.0 347 57.6
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.5e-107 393.7 339 59.3
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 4.2e-107 392.1 333 62.5
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 5.5e-107 391.7 336 59.5
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 5.5e-107 391.7 336 59.5
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 7.2e-107 391.3 333 62.5
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 7.2e-107 391.3 292 66.4
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 9.5e-107 391.0 336 58.9
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 1.2e-106 390.6 330 60.0
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.7e-106 388.7 342 59.4
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 1.4e-105 387.1 330 60.0
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.8e-105 386.7 330 59.7
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 4.4e-104 382.1 334 58.4
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 6.3e-103 378.3 336 57.7
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 2.0e-101 373.2 336 58.6
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 4.5e-101 372.1 336 54.2
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 3.9e-100 369.0 328 57.6
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 2.5e-99 366.3 332 57.8
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 6.8e-97 358.2 355 53.5
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 8.9e-97 357.8 331 56.2
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 7.5e-96 354.8 336 55.1
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 9.8e-96 354.4 330 54.2
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.3e-95 354.0 319 57.7
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 4.1e-94 349.0 336 55.7
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 7.0e-94 348.2 304 61.8
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 5.0e-92 342.0 331 53.2
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 2.5e-91 339.7 336 53.3
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 3.4e-88 329.3 245 70.6
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 2.2e-79 300.1 245 60.4
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 3.7e-79 299.3 335 50.1
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.1e-75 287.7 282 53.2
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.4e-73 280.0 360 43.6
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 2.9e-71 273.1 341 46.6
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.1e-61 240.4 312 43.6
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 3.0e-60 236.5 463 34.1
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 2.8e-58 229.9 349 40.4
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 6.2e-58 228.8 167 67.7
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 3.4e-56 223.0 335 40.6
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 4.6e-53 212.6 190 56.8
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 1.4e-49 201.1 150 66.0
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.4e-46 191.0 171 60.2
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 3.0e-36 156.8 160 51.2
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 6.7e-36 155.6 184 49.5
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.6e-34 151.0 170 44.7
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 4.8e-34 149.4 148 48.6
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 3.4e-32 143.3 151 51.0
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 1.8e-28 131.0 151 46.4
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 3.9e-28 129.8 81 70.4
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 1.8e-20 104.4 133 48.9
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 9.7e-19 98.6 132 39.4
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 5.3e-17 92.8 72 65.3
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 1.2e-16 91.7 63 63.5
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.5e-16 90.1 75 60.0
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 2.9e-15 87.0 57 63.2
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 4.1e-09 66.6 58 56.9
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 1.6e-08 64.7 43 72.1
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 3.8e-07 60.1 81 43.2
SHI28985 Sapria himalayana HOM05D000023 ORTHO05D000014 7.2e-06 55.8 53 56.6


User provided reference genes

Program Settings