Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 0.0e+00 2105.1 1066 100.0
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 0.0e+00 1581.2 1040 76.1
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 0.0e+00 1563.5 1040 75.3
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 0.0e+00 1557.3 1040 74.9
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 0.0e+00 1553.5 1041 76.0
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 0.0e+00 1552.3 1040 74.7
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 0.0e+00 1551.2 1042 75.7
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 0.0e+00 1548.5 1040 74.5
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 0.0e+00 1542.7 1042 75.0
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 0.0e+00 1539.2 1040 74.6
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 0.0e+00 1536.2 1040 73.9
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 0.0e+00 1531.2 1040 73.9
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 0.0e+00 1531.2 1042 73.5
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 0.0e+00 1524.6 1040 73.6
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 0.0e+00 1523.1 1042 73.1
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 0.0e+00 1522.3 1043 73.5
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 0.0e+00 1517.7 1040 73.1
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 0.0e+00 1517.7 1042 73.6
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 0.0e+00 1511.1 1041 72.3
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 0.0e+00 1509.2 1040 72.9
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 0.0e+00 1508.0 1040 72.9
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 0.0e+00 1498.8 1105 70.0
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 0.0e+00 1495.7 1040 71.6
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 0.0e+00 1495.3 1040 72.2
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 0.0e+00 1493.0 1041 72.2
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 0.0e+00 1481.8 1040 71.8
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 0.0e+00 1475.7 1045 71.8
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 0.0e+00 1474.1 1044 71.7
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 0.0e+00 1470.3 1048 70.8
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 0.0e+00 1469.9 1043 71.0
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 0.0e+00 1467.6 1059 70.6
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 0.0e+00 1467.6 1059 70.6
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 0.0e+00 1464.5 1040 70.9
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 0.0e+00 1464.1 1125 66.7
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 0.0e+00 1462.6 1041 69.6
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 0.0e+00 1462.2 1040 71.2
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 0.0e+00 1461.0 1040 70.7
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 0.0e+00 1460.3 1041 71.3
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 0.0e+00 1460.3 1041 70.6
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 0.0e+00 1459.9 1047 71.7
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 0.0e+00 1458.0 1044 71.3
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 0.0e+00 1454.9 1040 69.5
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 0.0e+00 1454.5 1040 70.7
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 0.0e+00 1453.7 1043 69.5
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 0.0e+00 1451.0 1043 70.1
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 0.0e+00 1449.5 1040 68.8
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 0.0e+00 1449.1 1037 70.7
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 0.0e+00 1444.9 1040 69.4
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 0.0e+00 1443.7 1047 70.1
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 0.0e+00 1442.9 1041 70.3
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 0.0e+00 1442.6 1047 70.1
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 0.0e+00 1441.8 961 75.7
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 0.0e+00 1440.2 1131 66.4
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 0.0e+00 1438.3 1040 68.9
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 0.0e+00 1437.9 1041 70.3
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 0.0e+00 1428.3 1041 68.7
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 0.0e+00 1427.9 1041 69.5
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 0.0e+00 1427.9 1041 68.8
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 0.0e+00 1427.9 1040 68.8
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 0.0e+00 1427.9 1041 70.7
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 0.0e+00 1427.9 1040 68.8
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 0.0e+00 1426.0 1041 70.8
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 0.0e+00 1425.6 1041 69.3
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 0.0e+00 1419.8 1040 69.2
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 0.0e+00 1416.7 1040 68.4
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 0.0e+00 1413.3 1041 68.2
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 0.0e+00 1412.9 1043 69.2
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 0.0e+00 1407.1 1040 68.8
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 0.0e+00 1406.7 1042 67.9
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 0.0e+00 1405.6 1040 68.4
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 0.0e+00 1401.7 1040 67.9
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 0.0e+00 1400.2 1041 67.6
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 0.0e+00 1395.6 1081 66.0
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 0.0e+00 1393.3 1040 68.3
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 0.0e+00 1389.4 1047 68.4
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 0.0e+00 1387.1 1119 65.4
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 0.0e+00 1380.9 1041 67.1
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 0.0e+00 1377.5 1048 66.9
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 0.0e+00 1369.4 1044 66.6
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 0.0e+00 1369.4 1053 65.6
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 0.0e+00 1368.2 1052 66.9
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 0.0e+00 1367.8 962 71.6
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 0.0e+00 1366.3 1249 58.0
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 0.0e+00 1360.1 1050 67.5
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 0.0e+00 1354.3 1041 67.6
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 0.0e+00 1310.4 934 71.3
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 0.0e+00 1256.1 1046 61.8
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 0.0e+00 1252.3 846 74.5
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 0.0e+00 1237.2 856 73.4
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 0.0e+00 1200.7 853 71.2
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 0.0e+00 1193.3 801 74.8
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 0.0e+00 1096.3 791 69.8
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 2.5e-310 1068.9 1064 53.9
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 1.0e-308 1063.5 961 59.5
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 1.6e-296 1023.1 1048 52.4
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 2.0e-291 1006.1 774 67.4
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 3.7e-282 975.3 1057 50.9
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 3.5e-264 915.6 765 62.0
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 3.4e-259 899.0 634 71.8
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 4.3e-238 828.9 519 77.5
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 4.8e-237 825.5 936 52.4
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 1.5e-235 820.5 663 63.8
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 1.3e-234 817.4 518 74.9
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 1.8e-212 743.8 450 77.1
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 9.1e-212 741.5 450 76.7
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 5.9e-211 738.8 453 76.8
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 1.6e-208 730.7 458 74.5
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 1.0e-202 711.4 480 70.0
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 1.3e-202 711.1 450 73.3
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 1.1e-201 708.0 455 72.7
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 2.5e-201 706.8 459 72.3
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 1.0e-199 701.4 450 74.2
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.0e-194 684.9 684 54.7
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 3.6e-192 676.4 453 70.6
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 2.4e-188 663.7 450 70.4
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 2.9e-186 656.8 485 64.9
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 2.8e-173 613.6 458 66.2
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 1.0e-167 595.1 468 62.8
PSO135G0878 Papaver somniferum HOM05D004198 ORTHO05D000955 1.4e-167 594.7 449 67.0
DCAR_011904 Daucus carota HOM05D004198 ORTHO05D006470 2.9e-157 560.5 412 67.5
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 1.0e-154 552.0 366 72.7
PGSC0003DMG402015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 9.5e-153 545.4 423 66.7
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 6.8e-151 539.3 366 70.2
Lj4C923T7 Lonicera japonica HOM05D004198 ORTHO05D006470 3.9e-146 523.5 384 69.5
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 1.5e-134 485.0 1119 31.5
vmacro12815 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 3.0e-130 470.7 596 47.1
A03p61840 Brassica napus HOM05D004198 ORTHO05D006470 7.1e-124 449.5 267 80.5
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 6.2e-120 436.4 242 87.2
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 4.2e-116 423.7 271 76.8
DCAR_000446 Daucus carota HOM05D004198 ORTHO05D006470 5.5e-116 423.3 286 73.4
Potri.006G134450 Populus trichocarpa HOM05D004198 ORTHO05D006470 5.1e-106 390.2 266 76.7
FAN26G1461 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.4e-103 381.3 213 86.9
Sopen07g006480 Solanum pennellii HOM05D004198 ORTHO05D006470 6.9e-103 379.8 243 78.2
SEGI_06318 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 1.4e-100 372.1 238 76.1
CAN.G86.10 Capsicum annuum HOM05D004198 ORTHO05D006470 2.1e-99 368.2 315 60.3
PSO724G0241 Papaver somniferum HOM05D004198 ORTHO05D006470 3.1e-71 274.6 156 84.0
Zm00001eb257190 Zea mays HOM05D004198 ORTHO05D030652 2.3e-61 241.9 286 47.9
Cc00_g13780 Coffea canephora HOM05D004198 ORTHO05D015220 1.2e-57 229.6 194 60.3
PGSC0003DMG400002302 Solanum tuberosum HOM05D004198 ORTHO05D015220 1.7e-53 215.7 190 60.0
ATR0721G130 Amborella trichopoda HOM05D004198 ORTHO05D006470 1.7e-45 189.1 122 73.0
Lj4A923T26 Lonicera japonica HOM05D004198 ORTHO05D006470 2.5e-44 185.3 169 64.5
SEGI_37264 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 2.5e-44 185.3 157 60.5
RcHm_v2.0_Chr2g0169881 Rosa chinensis HOM05D004198 ORTHO05D006470 2.1e-43 182.2 156 62.8
RcHm_v2.0_Chr2g0121231 Rosa chinensis HOM05D004198 ORTHO05D006470 1.5e-41 176.0 177 55.9
Zm00001eb048050 Zea mays HOM05D004198 ORTHO05D030652 3.9e-29 134.8 137 52.6
Zm00001eb129620 Zea mays HOM05D004198 ORTHO05D030652 6.6e-29 134.0 137 54.0
SEGI_05824 Sequoiadendron giganteum HOM05D004198 ORTHO05D043385 1.1e-28 133.3 83 71.1
Prupe.6G271300 Prunus persica HOM05D004198 ORTHO05D015220 4.3e-28 131.3 94 71.3
RcHm_v2.0_Chr2g0121241 Rosa chinensis HOM05D004198 ORTHO05D347069 9.5e-28 130.2 96 64.6
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 2.6e-25 122.1 85 65.9
RcHm_v2.0_Chr2g0169891 Rosa chinensis HOM05D004198 ORTHO05D340468 2.6e-25 122.1 96 61.5
CDE05G0275 Ceratophyllum demersum HOM05D004198 ORTHO05D015220 8.4e-24 117.1 91 65.9
Prupe.6G271400 Prunus persica HOM05D004198 ORTHO05D015220 1.3e-21 109.8 81 69.1
MD02G1105200 Malus domestica HOM05D004198 ORTHO05D006470 1.7e-21 109.4 55 89.1
Solyc07g017675.1 Solanum lycopersicum HOM05D004198 ORTHO05D015220 1.3e-19 103.2 97 59.8
Sopen07g006500 Solanum pennellii HOM05D004198 ORTHO05D015220 1.1e-18 100.1 77 67.5
CANSAT25G3628 Cannabis sativa HOM05D004198 ORTHO05D043385 1.2e-17 96.7 59 67.8
CAN.G86.11 Capsicum annuum HOM05D004198 ORTHO05D114955 4.9e-16 91.3 62 75.8
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 4.6e-14 84.7 74 59.5
Zm00001eb129630 Zea mays HOM05D004198 ORTHO05D015220 1.3e-13 83.2 53 77.4
EL10Ac4g10130 Beta vulgaris HOM05D001013 ORTHO05D004597 3.9e-13 81.6 57 61.4
EL10Ac4g10158 Beta vulgaris HOM05D001013 ORTHO05D016001 1.3e-11 76.6 56 57.1
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 1.8e-10 72.8 74 52.7
RcHm_v2.0_Chr5g0070481 Rosa chinensis HOM05D004198 ORTHO05D347121 6.9e-10 70.9 74 55.4
TPR.G28245 Trifolium pratense HOM05D001159 ORTHO05D001712 9.9e-09 67.0 41 73.2
Zm00001eb048040 Zea mays HOM05D004198 ORTHO05D015220 9.9e-09 67.0 44 72.7
EL10Ac8g19732 Beta vulgaris HOM05D004198 ORTHO05D006470 2.2e-08 65.9 48 70.8
Actinidia33514 Actinidia chinensis HOM05D004198 ORTHO05D015220 1.9e-07 62.8 64 56.2
Solyc07g017670.3 Solanum lycopersicum HOM05D004198 ORTHO05D030652 2.1e-06 59.3 44 54.5
MBI12_g24383_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 6.0e-06 57.8 36 72.2
CDE05G2763 Ceratophyllum demersum HOM05D004198 ORTHO05D130465 7.9e-06 57.4 82 39.0


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