Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C02488 Eucalyptus grandis HOM05D003979 ORTHO05D005530 1.2e-183 646.4 324 100.0
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 3.7e-132 475.3 339 76.7
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 6.9e-131 471.1 339 75.8
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 1.5e-130 469.9 339 74.6
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 2.0e-130 469.5 344 75.0
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 3.4e-130 468.8 340 73.8
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 1.3e-129 466.8 340 74.4
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 1.7e-129 466.5 340 73.5
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 2.2e-129 466.1 339 75.2
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 2.9e-129 465.7 340 74.1
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 2.9e-129 465.7 340 74.1
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 3.8e-129 465.3 340 75.0
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 5.0e-129 464.9 340 73.2
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 5.0e-129 464.9 340 74.7
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 6.5e-129 464.5 340 72.9
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 6.5e-129 464.5 339 74.0
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 8.5e-129 464.2 339 74.0
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 8.5e-129 464.2 340 73.5
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 1.1e-128 463.8 340 72.6
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 1.4e-128 463.4 339 74.0
GSVIVG01029073001 Vitis vinifera HOM05D003979 ORTHO05D005530 1.4e-128 463.4 339 74.0
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 1.9e-128 463.0 340 73.2
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 2.5e-128 462.6 340 73.8
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 2.5e-128 462.6 340 72.4
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 5.5e-128 461.5 340 72.9
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 9.4e-128 460.7 340 72.9
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 1.2e-127 460.3 340 72.6
Gohir.A10G121600 Gossypium hirsutum HOM05D003979 ORTHO05D005530 1.2e-127 460.3 339 74.0
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.2e-127 460.3 340 72.6
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 1.6e-127 459.9 348 70.7
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 1.6e-127 459.9 340 74.1
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 1.6e-127 459.9 340 73.5
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 2.1e-127 459.5 340 73.5
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 2.1e-127 459.5 340 72.4
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 2.1e-127 459.5 340 72.6
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 2.7e-127 459.1 340 73.5
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 2.7e-127 459.1 340 73.8
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 4.7e-127 458.4 339 73.7
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 4.7e-127 458.4 339 73.2
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 4.7e-127 458.4 339 74.3
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 4.7e-127 458.4 339 73.5
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 6.1e-127 458.0 340 72.1
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 1.0e-126 457.2 339 73.7
CDE04G1626 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 1.4e-126 456.8 339 73.2
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 1.4e-126 456.8 339 73.2
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 1.4e-126 456.8 340 74.4
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 3.0e-126 455.7 339 72.6
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 3.0e-126 455.7 339 73.5
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 3.0e-126 455.7 339 73.5
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 3.9e-126 455.3 340 73.5
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 5.1e-126 454.9 339 73.5
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 8.8e-126 454.1 335 72.2
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 1.1e-125 453.8 338 72.5
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 1.1e-125 453.8 339 72.3
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 2.0e-125 453.0 340 72.6
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 2.0e-125 453.0 338 72.8
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 2.6e-125 452.6 339 72.9
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 4.4e-125 451.8 339 72.0
HPP92_025762 Vanilla planifolia HOM05D003979 ORTHO05D005530 5.7e-125 451.4 339 72.0
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 7.4e-125 451.1 340 72.4
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 7.4e-125 451.1 339 72.0
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 7.4e-125 451.1 340 72.6
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 9.7e-125 450.7 373 67.0
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 9.7e-125 450.7 339 72.3
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 9.7e-125 450.7 339 73.2
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 9.7e-125 450.7 339 72.3
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 1.3e-124 450.3 339 72.0
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 1.7e-124 449.9 340 72.1
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 1.7e-124 449.9 339 72.6
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 1.7e-124 449.9 339 72.3
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 2.2e-124 449.5 339 72.0
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 3.7e-124 448.7 339 71.7
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 4.8e-124 448.4 339 72.0
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 4.8e-124 448.4 339 72.0
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 4.8e-124 448.4 339 72.3
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 6.3e-124 448.0 339 72.3
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 8.2e-124 447.6 338 72.5
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 8.2e-124 447.6 339 72.0
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 1.1e-123 447.2 340 72.4
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 1.1e-123 447.2 339 71.7
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 2.4e-123 446.0 340 71.8
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 2.4e-123 446.0 340 71.8
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 3.1e-123 445.7 339 71.4
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 3.1e-123 445.7 339 71.4
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 5.3e-123 444.9 339 71.4
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 7.0e-123 444.5 367 67.0
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 9.1e-123 444.1 339 72.0
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 9.1e-123 444.1 339 71.4
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 9.1e-123 444.1 339 71.7
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 1.2e-122 443.7 326 72.1
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 1.2e-122 443.7 349 69.3
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 1.5e-122 443.4 339 71.1
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 2.0e-122 443.0 340 71.2
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 2.0e-122 443.0 339 71.1
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 4.5e-122 441.8 339 71.4
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 7.7e-122 441.0 340 70.9
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 7.7e-122 441.0 340 70.6
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 7.7e-122 441.0 340 70.6
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 1.0e-121 440.7 340 70.9
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 1.0e-121 440.7 340 70.9
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 1.7e-121 439.9 339 70.2
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 2.2e-121 439.5 340 70.3
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 2.2e-121 439.5 340 70.3
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 2.2e-121 439.5 340 70.3
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 2.9e-121 439.1 340 70.3
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 5.0e-121 438.3 339 71.7
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 5.0e-121 438.3 340 70.3
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 5.0e-121 438.3 340 70.3
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 5.0e-121 438.3 340 70.0
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 1.1e-120 437.2 340 69.7
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 3.6e-119 432.2 315 75.2
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 6.1e-119 431.4 354 67.2
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 5.2e-118 428.3 407 62.2
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 2.0e-117 426.4 372 64.5
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 2.0e-117 426.4 372 64.5
SEGI_04002 Sequoiadendron giganteum HOM05D003979 ORTHO05D005530 3.3e-117 425.6 339 68.1
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 4.4e-117 425.2 339 67.6
HPP92_025731 Vanilla planifolia HOM05D003979 ORTHO05D005530 4.4e-117 425.2 338 69.8
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 8.2e-116 421.0 355 65.9
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 8.2e-116 421.0 339 66.1
SGA_v2.0_scaffold31G12595 Striga asiatica HOM05D003979 ORTHO05D005530 2.4e-115 419.5 341 66.9
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 4.5e-114 415.2 344 68.0
HPP92_025735 Vanilla planifolia HOM05D003979 ORTHO05D005530 7.7e-114 414.5 338 68.6
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 1.3e-113 413.7 339 65.5
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 6.5e-113 411.4 335 67.2
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 1.9e-112 409.8 339 64.6
unitig_899.g15534 Utricularia gibba HOM05D003979 ORTHO05D005530 6.1e-111 404.8 331 67.1
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 1.8e-107 393.3 356 62.9
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 3.5e-106 389.0 314 69.4
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 1.7e-105 386.7 340 60.9
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 2.1e-103 379.8 339 59.3
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 4.0e-102 375.6 339 63.4
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 6.3e-100 368.2 339 58.7
Atru.chr4.1774 Acer truncatum HOM05D003979 ORTHO05D005530 1.4e-99 367.1 321 63.9
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 6.6e-97 358.2 296 67.2
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 3.6e-95 352.4 248 74.6
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 2.0e-85 320.1 270 65.6
Cfa024863 Carpinus fangiana HOM05D003979 ORTHO05D005530 3.2e-83 312.8 341 50.7
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 6.0e-82 308.5 236 72.0
Manes.03G150102 Manihot esculenta HOM05D003979 ORTHO05D005530 2.1e-74 283.5 240 62.1
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.3e-73 280.8 345 48.1
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 5.6e-72 275.4 245 66.5
Eucgr.H02826 Eucalyptus grandis HOM05D003979 ORTHO05D005530 1.2e-71 274.2 171 85.4
TPR.G30672 Trifolium pratense HOM05D003979 ORTHO05D005530 7.1e-67 258.5 218 66.5
Eucgr.H02825 Eucalyptus grandis HOM05D003979 ORTHO05D015566 3.5e-50 203.0 122 88.5
Eucgr.C02482 Eucalyptus grandis HOM05D003979 ORTHO05D015566 9.6e-40 168.3 87 95.4
Cfa020039 Carpinus fangiana HOM05D003979 ORTHO05D015566 1.1e-38 164.9 95 84.2
Duzib268G0265 Durio zibethinus HOM05D003979 ORTHO05D015566 3.5e-34 149.8 94 72.3
QL06p023466 Quercus lobata HOM05D003979 ORTHO05D015566 4.6e-34 149.4 88 79.5
PGSC0003DMG400028636 Solanum tuberosum HOM05D003979 ORTHO05D015566 5.7e-32 142.5 88 73.9
Lsat_1_v5_gn_4_162440 Lactuca sativa HOM05D003979 ORTHO05D015566 1.4e-30 137.9 108 71.3
Oeu022341.1 Olea europaea HOM05D003979 ORTHO05D049433 1.2e-29 134.8 157 53.5
Cfa023448 Carpinus fangiana HOM05D003979 ORTHO05D123299 1.3e-25 121.3 346 28.6
THA.LOC104809102 Tarenaya hassleriana HOM05D003979 ORTHO05D049433 5.1e-25 119.4 72 86.1
Oeu006718.2 Olea europaea HOM05D003979 ORTHO05D005530 5.3e-22 109.4 74 78.4
Lsat_1_v5_gn_5_133441 Lactuca sativa HOM05D003979 ORTHO05D015566 1.0e-20 105.1 102 59.8
CAN.G12.21 Capsicum annuum HOM05D003979 ORTHO05D015566 8.8e-17 92.0 52 82.7
TPR.G35859 Trifolium pratense HOM05D003979 ORTHO05D015566 3.2e-11 73.6 57 71.9
CAN.G12.20 Capsicum annuum HOM05D003979 ORTHO05D015566 2.1e-10 70.9 43 67.4
TAR362G1054 Trochodendron aralioides HOM05D000447 ORTHO05D000315 1.4e-09 68.2 42 73.8
SMO361G0618 Selaginella moellendorffii HOM05D003979 ORTHO05D015566 3.1e-06 57.0 171 29.8
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 4.1e-06 56.6 32 90.6


User provided reference genes

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