Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 4.4e-258 894.0 431 100.0
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 7.7e-162 574.3 378 72.8
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 3.3e-160 568.9 380 72.1
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 7.2e-160 567.8 389 71.2
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 6.8e-158 561.2 380 71.3
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 4.4e-157 558.5 383 72.8
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 9.8e-157 557.4 385 70.6
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 3.1e-155 552.4 381 71.9
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 9.2e-155 550.8 385 69.4
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 9.2e-155 550.8 397 67.8
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 3.5e-154 548.9 381 69.6
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 5.9e-154 548.1 381 70.9
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 7.8e-154 547.7 383 72.1
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 1.3e-153 547.0 396 67.9
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 1.7e-153 546.6 399 66.9
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 1.5e-152 543.5 381 70.6
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 2.5e-152 542.7 381 69.0
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 4.3e-152 542.0 395 67.6
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 7.3e-152 541.2 381 70.3
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 2.1e-151 539.7 382 69.6
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 2.8e-151 539.3 424 63.2
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 4.0e-150 535.4 397 66.0
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 5.2e-150 535.0 378 69.8
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 8.9e-150 534.3 381 70.1
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 5.8e-149 531.6 380 69.5
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 1.3e-148 530.4 395 68.1
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 1.7e-148 530.0 382 69.1
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 3.7e-148 528.9 377 67.6
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 6.4e-148 528.1 379 68.6
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 8.3e-148 527.7 378 70.1
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 1.1e-147 527.3 377 70.3
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 1.4e-147 526.9 382 68.6
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 1.4e-147 526.9 382 68.8
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 1.9e-147 526.6 395 67.8
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 4.1e-147 525.4 382 68.8
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 7.0e-147 524.6 390 66.7
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 1.6e-146 523.5 386 66.8
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 1.3e-145 520.4 381 67.2
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 6.6e-145 518.1 378 68.3
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 4.3e-144 515.4 379 67.8
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 4.3e-144 515.4 382 67.5
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 4.3e-144 515.4 381 68.0
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 4.3e-144 515.4 385 67.0
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 1.2e-143 513.8 388 65.2
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 4.7e-143 511.9 381 66.4
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 4.7e-143 511.9 386 65.0
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 6.2e-143 511.5 381 66.4
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 2.3e-142 509.6 378 68.0
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 1.5e-141 506.9 382 66.5
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 2.0e-141 506.5 389 67.4
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 2.0e-141 506.5 384 65.4
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 3.2e-139 499.2 380 64.5
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 4.6e-138 495.4 387 66.1
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 7.8e-138 494.6 390 64.1
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 1.0e-137 494.2 387 64.9
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 1.7e-137 493.4 392 63.0
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 3.0e-137 492.7 363 66.9
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 3.6e-135 485.7 400 61.5
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 1.8e-134 483.4 390 61.3
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 5.2e-134 481.9 367 65.9
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.2e-133 480.7 388 63.4
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 2.6e-133 479.6 396 62.1
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 7.5e-133 478.0 384 63.3
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 9.9e-133 477.6 390 62.3
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 7.1e-131 471.5 372 63.4
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 1.2e-130 470.7 422 58.3
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 9.5e-128 461.1 360 65.8
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 2.1e-127 459.9 387 60.7
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 2.8e-127 459.5 357 65.3
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 3.1e-126 456.1 340 66.8
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 2.0e-125 453.4 390 59.7
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 3.4e-125 452.6 390 58.5
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 7.6e-125 451.4 379 61.5
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.2e-124 449.9 354 63.8
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 7.8e-122 441.4 321 69.5
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 8.7e-121 438.0 336 65.2
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 9.9e-117 424.5 300 67.3
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 4.6e-114 415.6 314 65.3
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 2.5e-112 409.8 316 64.6
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 5.4e-107 392.1 449 49.4
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 6.2e-103 378.6 388 52.3
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.5e-101 374.0 381 52.5
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 1.0e-100 371.3 318 58.5
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 1.3e-100 370.9 463 45.4
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 1.7e-100 370.5 344 55.2
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 1.7e-100 370.5 296 63.2
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 2.1e-95 353.6 378 53.7
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 2.4e-94 350.1 287 61.0
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.1e-86 324.7 540 38.9
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 6.7e-81 305.4 375 48.3
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 1.4e-78 297.7 289 55.4
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.2e-77 294.7 263 57.4
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 1.0e-76 291.6 283 56.2
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 2.5e-75 287.0 169 81.7
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 6.1e-74 282.3 246 58.5
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 5.1e-73 279.3 160 83.8
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.4e-70 271.2 292 50.0
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 7.0e-70 268.9 433 38.8
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 5.9e-69 265.8 391 42.2
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.7e-66 256.9 341 47.5
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 1.1e-64 251.5 270 50.0
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 2.6e-64 250.4 150 78.7
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 5.7e-64 249.2 258 54.3
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 2.3e-57 227.3 222 53.2
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 1.9e-51 207.6 406 38.2
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 2.6e-48 197.2 200 51.0
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.8e-42 177.2 111 75.7
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 3.0e-41 173.7 186 53.8
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 2.9e-39 167.2 439 31.0
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 8.0e-34 149.1 313 33.2
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 5.8e-32 142.9 82 80.5
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.3e-31 141.7 139 53.2
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 1.4e-30 138.3 174 43.1
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 4.1e-30 136.7 84 77.4
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.0e-28 132.1 80 78.8
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 4.0e-25 120.2 80 70.0
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.5e-24 118.2 80 68.8
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 1.3e-20 105.1 69 76.8
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.8e-17 94.7 66 68.2
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.2e-16 92.0 64 71.9
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 2.9e-15 87.4 120 37.5
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 8.4e-15 85.9 67 64.2
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.2e-14 84.0 51 74.5
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 4.1e-14 83.6 49 77.6
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.1e-13 81.3 55 65.5
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 6.2e-10 69.7 57 59.6
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.5e-08 65.1 41 65.9
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 3.4e-08 63.9 89 40.4
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 6.4e-07 59.7 28 89.3
MD08G1143600 Malus domestica HOM05D005914 ORTHO05D007361 3.2e-06 57.4 63 46.0


User provided reference genes

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