Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 3.8e-257 891.0 434 100.0
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.8e-236 820.8 448 91.7
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 5.2e-190 667.9 449 73.1
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 2.2e-188 662.5 441 73.5
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 4.1e-187 658.3 445 72.1
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 7.0e-187 657.5 441 72.6
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 3.5e-186 655.2 444 72.1
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 3.5e-186 655.2 448 71.7
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 1.7e-185 652.9 458 69.7
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 2.9e-185 652.1 448 69.6
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 1.5e-184 649.8 454 70.7
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.9e-184 649.4 450 69.6
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 5.5e-184 647.9 444 70.3
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 1.6e-183 646.4 450 68.9
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 3.6e-183 645.2 448 70.8
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 4.7e-183 644.8 446 70.2
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.7e-183 644.8 446 69.3
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 6.1e-183 644.4 448 69.4
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 6.1e-183 644.4 445 70.6
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 8.0e-183 644.0 455 69.0
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.0e-182 643.7 446 70.2
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 1.4e-182 643.3 452 68.6
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 3.0e-182 642.1 446 69.7
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.0e-182 641.7 444 69.1
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 6.8e-182 641.0 445 70.3
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.2e-181 640.2 451 68.1
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 1.5e-181 639.8 450 69.1
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 2.0e-181 639.4 444 68.7
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 2.6e-181 639.0 451 70.3
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 4.4e-181 638.3 451 70.3
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 5.7e-181 637.9 449 69.3
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 1.3e-180 636.7 449 68.2
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 1.7e-180 636.3 450 68.7
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 3.7e-180 635.2 444 69.4
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 1.4e-179 633.3 444 69.8
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 1.8e-179 632.9 451 67.8
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 1.8e-179 632.9 448 68.5
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.8e-179 632.9 451 67.6
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 4.1e-179 631.7 451 67.8
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 7.0e-179 630.9 449 68.8
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 9.2e-179 630.6 445 68.3
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.2e-178 630.2 451 67.8
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 2.7e-178 629.0 449 67.7
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 3.5e-178 628.6 434 70.5
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 3.5e-178 628.6 456 68.9
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 3.5e-178 628.6 450 67.6
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 5.9e-178 627.9 440 69.5
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 5.9e-178 627.9 445 69.0
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 5.9e-178 627.9 454 67.4
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 1.0e-177 627.1 450 66.9
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.0e-177 627.1 449 68.4
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 5.0e-177 624.8 449 67.5
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 8.6e-177 624.0 437 69.3
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.5e-176 622.5 445 69.2
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 7.3e-176 620.9 440 69.3
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 9.5e-176 620.5 444 69.8
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 9.5e-176 620.5 456 67.5
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 1.2e-175 620.2 444 69.6
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 1.6e-175 619.8 450 66.4
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 1.6e-175 619.8 441 68.5
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 2.1e-175 619.4 446 67.9
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.8e-174 616.3 444 69.1
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.8e-174 616.3 445 67.9
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 3.1e-174 615.5 468 65.8
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 4.0e-174 615.1 441 68.7
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 4.0e-174 615.1 445 66.3
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 6.8e-174 614.4 440 68.2
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 3.4e-173 612.1 441 68.3
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 4.4e-173 611.7 439 68.6
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 4.4e-173 611.7 483 63.1
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 7.5e-173 610.9 443 66.8
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 3.7e-172 608.6 449 66.1
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 6.4e-172 607.8 438 68.5
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 1.1e-171 607.1 435 67.8
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 2.4e-171 605.9 441 66.7
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 2.4e-171 605.9 449 65.3
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 5.4e-171 604.7 442 65.6
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 9.2e-171 604.0 440 67.0
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 1.0e-169 600.5 446 65.5
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 1.7e-169 599.7 439 67.9
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 5.0e-169 598.2 442 66.1
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 8.6e-169 597.4 446 65.5
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 8.6e-169 597.4 441 67.1
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 4.7e-167 591.7 448 65.0
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 2.0e-165 586.3 442 63.6
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 9.8e-165 583.9 444 65.8
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 2.2e-164 582.8 444 65.5
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 6.4e-164 581.3 430 66.3
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 1.9e-163 579.7 448 63.2
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.5e-160 570.1 443 62.5
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.7e-159 565.1 463 63.3
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 1.4e-158 563.5 438 63.0
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 2.0e-149 533.1 439 60.6
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 5.1e-145 518.5 436 60.6
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 6.2e-143 511.5 443 60.5
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 2.2e-140 503.1 336 73.2
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 8.4e-140 501.1 353 69.4
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 5.1e-129 465.3 443 55.5
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 2.4e-126 456.4 439 54.2
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 3.4e-125 452.6 435 53.8
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 5.7e-120 435.3 415 54.0
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.4e-115 420.6 448 51.6
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 1.0e-113 414.5 498 45.6
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 5.7e-112 408.7 454 48.2
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 2.2e-111 406.8 499 45.5
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 3.1e-110 402.9 313 61.3
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.0e-104 383.6 427 51.8
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 2.0e-104 383.6 453 46.1
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 7.4e-96 355.1 453 44.6
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 2.2e-84 317.0 459 41.2
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 3.6e-82 309.7 218 72.0
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 1.8e-78 297.4 448 38.8
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 3.1e-78 296.6 462 39.2
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 5.2e-73 279.3 563 34.8
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 1.9e-54 217.6 153 71.9
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 4.6e-45 186.4 169 57.4
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 6.0e-37 159.5 146 61.0
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 1.7e-36 157.9 102 75.5
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.7e-34 149.8 100 67.0
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.4e-33 148.3 100 67.0
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 1.4e-33 148.3 166 54.8
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 2.7e-29 134.0 96 63.5
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 5.3e-25 119.8 100 65.0
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 5.6e-19 99.8 63 68.3
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 5.8e-16 89.7 86 55.8
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 6.4e-15 86.3 62 64.5
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 2.3e-12 77.8 59 64.4


User provided reference genes

Program Settings