Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 8.9e-265 916.4 463 100.0
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 5.9e-176 621.3 473 68.9
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.4e-171 605.1 462 66.0
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 5.7e-171 604.7 451 68.7
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 5.9e-168 594.7 460 66.3
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 1.0e-167 594.0 463 65.4
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.0e-167 594.0 470 66.6
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 3.9e-167 592.0 462 66.5
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 5.0e-167 591.7 463 65.4
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 6.6e-167 591.3 462 64.5
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 9.5e-166 587.4 462 63.9
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.1e-165 586.3 463 65.0
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 1.0e-164 583.9 464 65.7
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 5.2e-164 581.6 462 65.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 8.9e-164 580.9 465 65.6
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 8.9e-164 580.9 467 64.7
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.5e-163 580.1 464 65.5
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 2.6e-163 579.3 461 65.5
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 4.4e-163 578.6 463 64.8
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 9.8e-163 577.4 464 65.1
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.9e-162 575.9 474 64.1
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 3.2e-161 572.4 470 64.0
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 7.8e-160 567.8 460 63.0
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 3.9e-159 565.5 474 64.1
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 7.3e-158 561.2 460 63.5
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 7.3e-158 561.2 465 61.7
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.2e-157 560.5 464 62.3
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.6e-157 560.1 439 66.1
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 8.1e-157 557.8 471 62.2
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 6.8e-156 554.7 452 63.1
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 8.9e-156 554.3 475 62.7
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 8.9e-156 554.3 450 63.6
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 3.7e-154 548.9 564 54.3
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 8.3e-154 547.7 458 61.6
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 8.3e-154 547.7 465 61.5
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 8.3e-154 547.7 467 60.6
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.9e-153 546.6 463 61.1
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 3.2e-153 545.8 467 61.2
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.1e-152 543.1 465 61.3
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 3.9e-151 538.9 461 61.2
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 5.1e-151 538.5 474 61.0
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 6.6e-151 538.1 477 59.5
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 4.3e-150 535.4 400 68.2
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 9.5e-150 534.3 461 61.6
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 9.5e-150 534.3 465 60.9
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.1e-149 533.1 462 61.0
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.8e-149 532.7 458 60.7
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.8e-149 532.7 463 61.3
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 8.1e-149 531.2 468 59.4
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.1e-148 530.8 457 60.4
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 2.3e-148 529.6 477 58.5
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.1e-148 529.3 464 61.0
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 4.0e-148 528.9 477 58.7
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 4.0e-148 528.9 502 57.4
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.2e-147 527.3 480 57.9
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 2.0e-147 526.6 478 58.8
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 2.6e-147 526.2 463 59.8
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 4.4e-147 525.4 468 59.4
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 2.2e-146 523.1 463 59.6
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 2.2e-146 523.1 463 59.8
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 2.2e-146 523.1 462 59.7
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.2e-146 523.1 519 55.9
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 3.7e-146 522.3 464 59.7
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 8.4e-146 521.2 479 57.6
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.4e-145 520.4 463 59.4
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.9e-145 520.0 490 57.3
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.4e-145 519.6 469 58.4
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 8.6e-143 511.1 435 61.1
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.1e-142 510.8 464 59.1
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 8.9e-140 501.1 455 56.9
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 8.9e-140 501.1 465 58.3
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.0e-139 500.0 478 56.7
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 9.9e-139 497.7 457 57.8
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.3e-138 497.3 470 57.2
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.3e-138 497.3 407 62.4
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.2e-138 496.5 482 54.8
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 8.4e-138 494.6 464 56.7
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.2e-136 490.7 364 68.1
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.6e-136 490.3 452 58.4
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.9e-134 483.4 390 65.9
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.5e-134 483.0 339 71.7
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.6e-133 480.3 470 54.9
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 6.2e-133 478.4 477 54.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.6e-131 473.0 443 56.7
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 1.1e-129 467.6 464 54.3
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.4e-129 466.5 472 53.4
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.0e-127 461.1 482 52.5
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.1e-126 457.6 456 53.9
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 1.9e-126 456.8 472 53.4
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 9.6e-126 454.5 378 60.6
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 7.6e-123 444.9 363 63.9
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 4.6e-120 435.6 447 55.0
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 6.5e-114 415.2 465 51.0
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.1e-110 404.4 322 64.6
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 9.3e-105 384.8 466 49.6
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 2.7e-104 383.3 459 47.9
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 4.3e-102 375.9 461 46.6
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.4e-100 370.9 351 56.7
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.4e-100 370.9 351 56.7
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.0e-95 354.8 487 43.7
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.3e-95 353.6 291 63.9
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 2.6e-94 350.1 368 53.3
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.9e-90 336.7 260 65.8
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 4.7e-88 329.3 235 69.4
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.9e-82 310.1 440 45.7
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 8.5e-82 308.5 234 66.2
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 2.6e-78 297.0 349 45.6
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 3.2e-73 280.0 462 36.4
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 3.6e-72 276.6 458 40.4
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 4.7e-64 249.6 348 42.2
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.8e-63 247.7 376 43.1
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.2e-61 240.7 225 56.9
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 4.7e-56 223.0 293 43.7
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.5e-54 218.0 179 62.6
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.9e-50 203.4 224 50.0
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.1e-49 201.8 175 60.0
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.5e-46 191.4 161 63.4
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.5e-46 191.4 161 63.4
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 9.2e-44 182.2 427 32.8
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 7.8e-43 179.1 166 57.8
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.3e-37 161.8 148 56.1
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 8.3e-37 159.1 146 55.5
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 5.1e-34 149.8 180 48.9
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 4.7e-32 143.3 118 63.6
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 4.0e-31 140.2 118 62.7
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 2.3e-26 124.4 490 26.1
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.6e-16 90.5 69 65.2
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 6.9e-15 86.3 105 46.7
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-12 78.6 105 43.8
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-11 75.1 52 71.2
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.7e-11 74.3 52 71.2
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.3e-10 72.0 98 44.9


User provided reference genes

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