Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00273 Eucalyptus grandis HOM05D000070 ORTHO05D005931 1.7e-114 416.0 211 100.0
PGR083G1687 Punica granatum HOM05D000070 ORTHO05D005931 2.4e-63 246.1 213 62.9
Cfa015158 Carpinus fangiana HOM05D000070 ORTHO05D005931 4.9e-61 238.4 213 62.9
CiPaw.01G100800 Carya illinoinensis HOM05D000070 ORTHO05D005931 1.2e-59 233.8 215 60.5
Potri.017G030900 Populus trichocarpa HOM05D000070 ORTHO05D005931 1.1e-57 227.3 213 59.6
Potri.017G031400 Populus trichocarpa HOM05D000070 ORTHO05D005931 5.6e-57 224.9 212 58.5
TWI15G0144 Tripterygium wilfordii HOM05D000070 ORTHO05D005931 9.6e-57 224.2 215 58.1
Manes.04G042700 Manihot esculenta HOM05D000070 ORTHO05D005931 1.1e-55 220.7 210 58.1
Potri.007G127900 Populus trichocarpa HOM05D000070 ORTHO05D005931 1.1e-55 220.7 212 58.0
CSS0028544 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D005931 1.4e-55 220.3 209 56.9
Sabra07G0104200 Salix brachista HOM05D000070 ORTHO05D005931 1.4e-55 220.3 212 58.5
Dinv36378 Davidia involucrata HOM05D000070 ORTHO05D005931 1.8e-55 219.9 210 57.6
Thecc.04G186200 Theobroma cacao HOM05D000070 ORTHO05D005931 4.0e-55 218.8 211 60.7
QL10p048553 Quercus lobata HOM05D000070 ORTHO05D005931 3.4e-54 215.7 211 58.3
Actinidia35972 Actinidia chinensis HOM05D000070 ORTHO05D005931 4.5e-54 215.3 212 57.1
CANSAT54G0506 Cannabis sativa HOM05D000070 ORTHO05D005931 2.2e-53 213.0 211 59.2
Actinidia34607 Actinidia chinensis HOM05D000070 ORTHO05D005931 1.9e-52 209.9 212 55.2
Sabra17G0020000 Salix brachista HOM05D000070 ORTHO05D005931 4.2e-52 208.8 213 54.5
Ciclev10018558m.g Citrus clementina HOM05D000070 ORTHO05D005931 5.5e-52 208.4 213 56.8
Haze_01497 Corylus avellana HOM05D000067 ORTHO05D005931 7.1e-52 208.0 224 54.5
GSVIVG01010750001 Vitis vinifera HOM05D000070 ORTHO05D005931 9.3e-52 207.6 215 55.8
MD04G1007800 Malus domestica HOM05D000070 ORTHO05D005931 4.6e-51 205.3 212 55.2
COL.COLO4_20908 Corchorus olitorius HOM05D000070 ORTHO05D005931 6.0e-51 204.9 229 55.0
Rhsim09G0028300 Rhododendron simsii HOM05D000070 ORTHO05D005931 6.0e-51 204.9 212 53.8
Gohir.D02G016900 Gossypium hirsutum HOM05D000070 ORTHO05D005931 7.9e-51 204.5 210 55.2
Lalb_Chr01g0003191 Lupinus albus HOM05D000070 ORTHO05D005931 1.3e-50 203.8 209 54.1
Gohir.A02G015301 Gossypium hirsutum HOM05D000070 ORTHO05D005931 1.8e-50 203.4 210 54.8
vmacro22679 Vaccinium macrocarpon HOM05D000070 ORTHO05D005931 1.8e-50 203.4 209 53.1
Cc10_g15760 Coffea canephora HOM05D000070 ORTHO05D005931 3.9e-50 202.2 209 53.6
Duzib151G0220 Durio zibethinus HOM05D000070 ORTHO05D005931 3.3e-49 199.1 211 55.9
Glyma.12G052800 Glycine max HOM05D000070 ORTHO05D005931 3.3e-49 199.1 209 54.5
Gorai.005G020700 Gossypium raimondii HOM05D000070 ORTHO05D005931 5.7e-49 198.4 210 53.8
Glyma.11G128300 Glycine max HOM05D000070 ORTHO05D005931 7.4e-49 198.0 209 53.6
TAR362G0755 Trochodendron aralioides HOM05D000070 ORTHO05D005931 1.3e-48 197.2 214 53.7
TPR.G34234 Trifolium pratense HOM05D000070 ORTHO05D005931 2.8e-48 196.1 215 53.0
CAN.G475.45 Capsicum annuum HOM05D000070 ORTHO05D005931 3.7e-48 195.7 210 51.4
Lj3g0013218 Lotus japonicus HOM05D000070 ORTHO05D005931 3.7e-48 195.7 211 52.6
arahy.Tifrunner.gnm1.ann1.B2FMMM Arachis hypogaea HOM05D000070 ORTHO05D005931 4.8e-48 195.3 209 52.2
arahy.Tifrunner.gnm1.ann1.4K4GN8 Arachis hypogaea HOM05D000070 ORTHO05D005931 8.2e-48 194.5 209 52.2
VMungo1127G1655 Vigna mungo HOM05D000070 ORTHO05D005931 8.2e-48 194.5 209 52.2
Gorai.009G351300 Gossypium raimondii HOM05D000070 ORTHO05D005931 1.4e-47 193.7 211 54.5
Ca_20782_v3 Cicer arietinum L. HOM05D000070 ORTHO05D005931 2.4e-47 193.0 211 53.1
Cpa.g.sc9.267 Carica papaya HOM05D000070 ORTHO05D005931 5.3e-47 191.8 217 50.2
Solyc04g076180.4 Solanum lycopersicum HOM05D000070 ORTHO05D005931 5.3e-47 191.8 211 52.6
Gohir.A05G327300 Gossypium hirsutum HOM05D000070 ORTHO05D005931 6.9e-47 191.4 212 56.6
MELO3C011649.2 Cucumis melo HOM05D000070 ORTHO05D005931 9.0e-47 191.0 211 50.2
Sopen04g030020 Solanum pennellii HOM05D000070 ORTHO05D005931 9.0e-47 191.0 211 52.1
Medtr4g067100 Medicago truncatula HOM05D000070 ORTHO05D005931 2.0e-46 189.9 211 54.0
Psat7g213760 Pisum sativum HOM05D000070 ORTHO05D005931 2.0e-46 189.9 211 53.1
MSTRG.22453 Avicennia marina HOM05D000070 ORTHO05D005931 3.4e-46 189.1 209 49.3
Peaxi162Scf00281g00017 Petunia axillaris HOM05D000070 ORTHO05D005931 4.5e-46 188.7 210 52.9
ECA240G1160 Erigeron canadensis HOM05D000070 ORTHO05D005931 1.0e-45 187.6 208 51.4
Gohir.D05G327400 Gossypium hirsutum HOM05D000070 ORTHO05D005931 1.7e-45 186.8 211 53.6
HanXRQChr03g0091981 Helianthus annuus HOM05D000070 ORTHO05D005931 2.2e-45 186.4 210 50.0
RcHm_v2.0_Chr4g0406861 Rosa chinensis HOM05D000070 ORTHO05D005931 2.2e-45 186.4 213 51.2
FAN07G1072 Fragaria x ananassa HOM05D000961 ORTHO05D005931 2.9e-45 186.0 213 50.7
Sed0022342 Sechium edule HOM05D000070 ORTHO05D005931 8.4e-45 184.5 218 47.7
AL1G15870 Arabidopsis lyrata HOM05D000070 ORTHO05D005931 1.9e-44 183.3 214 49.5
Nitab4.5_0000131g0440 Nicotiana tabacum HOM05D000070 ORTHO05D005931 1.9e-44 183.3 209 52.6
AT1G05910 Arabidopsis thaliana HOM05D000070 ORTHO05D005931 2.5e-44 183.0 219 50.2
Carub.0001s0528 Capsella rubella HOM05D000070 ORTHO05D005931 2.5e-44 183.0 215 49.8
Sc25g0003000 Simmondsia chinensis HOM05D000070 ORTHO05D005931 3.2e-44 182.6 212 50.0
SGA_v2.0_scaffold118G32488 Striga asiatica HOM05D000070 ORTHO05D005931 3.2e-44 182.6 209 48.8
CsaV3_6G003880 Cucumis sativus L. HOM05D000070 ORTHO05D005931 7.1e-44 181.4 211 48.3
BraA10t42726Z Brassica rapa HOM05D000070 ORTHO05D005931 4.6e-43 178.7 217 47.5
QL01p052795 Quercus lobata HOM05D000070 ORTHO05D005931 4.6e-43 178.7 217 52.1
Nitab4.5_0003300g0060 Nicotiana tabacum HOM05D000070 ORTHO05D005931 7.9e-43 177.9 211 50.7
EL10Ac3g05926 Beta vulgaris HOM05D000070 ORTHO05D005931 1.3e-42 177.2 211 49.8
Phvul.011G054900 Phaseolus vulgaris HOM05D000070 ORTHO05D005931 1.8e-42 176.8 209 50.2
AUR62015394 Chenopodium quinoa HOM05D000070 ORTHO05D005931 2.3e-42 176.4 213 49.8
A10p04610 Brassica napus HOM05D000070 ORTHO05D005931 3.9e-42 175.6 214 46.3
QL01p053894 Quercus lobata HOM05D000070 ORTHO05D005931 3.9e-42 175.6 229 49.3
BcaC05g24320 Brassica carinata HOM05D000070 ORTHO05D005931 6.7e-42 174.9 219 45.7
Nn1g09748 Nelumbo nucifera HOM05D000070 ORTHO05D005931 6.7e-42 174.9 231 48.5
CARHR005470 Cardamine hirsuta HOM05D000070 ORTHO05D005931 1.1e-41 174.1 214 46.3
Thhalv10006586m.g Eutrema salsugineum HOM05D000070 ORTHO05D005931 1.1e-41 174.1 219 48.9
THA.LOC104826206 Tarenaya hassleriana HOM05D000070 ORTHO05D005931 1.1e-41 174.1 214 47.7
Lj6C54T5 Lonicera japonica HOM05D000070 ORTHO05D005931 1.9e-41 173.3 231 47.6
BraA09t42057Z Brassica rapa HOM05D000070 ORTHO05D005931 2.5e-41 172.9 222 45.9
C05p04270 Brassica napus HOM05D000070 ORTHO05D005931 4.3e-41 172.2 221 46.2
BolC5t29202H Brassica oleracea HOM05D000070 ORTHO05D005931 4.3e-41 172.2 221 46.2
Hund12010 Selenicereus undatus HOM05D000070 ORTHO05D005931 9.7e-41 171.0 217 48.8
BolC8t52681H Brassica oleracea HOM05D000070 ORTHO05D005931 2.8e-40 169.5 216 45.4
Sed0006140 Sechium edule HOM05D000070 ORTHO05D005931 4.8e-40 168.7 215 48.4
Aa31LG1G8340 Aethionema arabicum HOM05D000070 ORTHO05D005931 6.3e-40 168.3 215 45.1
A09p67240 Brassica napus HOM05D000070 ORTHO05D005931 8.2e-40 167.9 216 45.8
SalBow7G2668 Salvia bowleyana HOM05D000070 ORTHO05D005931 1.8e-39 166.8 209 47.4
C08p51530 Brassica napus HOM05D000070 ORTHO05D005931 2.4e-39 166.4 216 44.9
FAN12G3303 Fragaria x ananassa HOM05D003140 ORTHO05D005931 2.4e-39 166.4 189 49.2
BcaC07g42100 Brassica carinata HOM05D000070 ORTHO05D005931 3.1e-39 166.0 223 43.9
Sp1g04750 Schrenkiella parvula HOM05D000070 ORTHO05D005931 4.1e-39 165.6 221 46.2
Migut.C01257 Erythranthe guttata HOM05D000070 ORTHO05D005931 6.9e-39 164.9 216 43.1
MSTRG.1524 Avicennia marina HOM05D000070 ORTHO05D005931 3.4e-38 162.5 183 48.6
arahy.Tifrunner.gnm1.ann1.5J8MXK Arachis hypogaea HOM05D000070 ORTHO05D016631 4.5e-38 162.2 208 44.2
Aqoxy2G04141 Aquilegia oxysepala HOM05D000070 ORTHO05D005931 2.2e-37 159.8 208 46.6
HPP92_009007 Vanilla planifolia HOM05D000070 ORTHO05D005931 4.2e-36 155.6 212 42.5
Lsat_1_v5_gn_3_121920 Lactuca sativa HOM05D000070 ORTHO05D005931 7.2e-36 154.8 222 44.1
Ah.13g072900 Amaranthus hybridus HOM05D000070 ORTHO05D005931 1.2e-35 154.1 217 44.2
arahy.Tifrunner.gnm1.ann1.KNUI9Y Arachis hypogaea HOM05D000070 ORTHO05D005931 3.6e-35 152.5 183 47.0
QL01p053252 Quercus lobata HOM05D000070 ORTHO05D005931 1.1e-33 147.5 220 46.4
PSO210G2057 Papaver somniferum HOM05D000070 ORTHO05D005931 5.7e-33 145.2 263 40.3
PSO832G4402 Papaver somniferum HOM05D000070 ORTHO05D005931 5.7e-33 145.2 263 39.9
RcHm_v2.0_Chr6g0270811 Rosa chinensis HOM05D000070 ORTHO05D005931 4.8e-32 142.1 162 51.2
unitig_0.g2133 Utricularia gibba HOM05D000070 ORTHO05D005931 4.8e-32 142.1 214 39.7
Os09g0515100 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D005931 1.1e-31 141.0 222 39.6
CDE04G2237 Ceratophyllum demersum HOM05D000070 ORTHO05D005931 1.5e-30 137.1 203 41.4
HPP92_008996 Vanilla planifolia HOM05D000070 ORTHO05D005931 1.5e-30 137.1 186 42.5
Zm00001eb318390 Zea mays HOM05D000070 ORTHO05D005931 1.1e-28 131.0 221 39.4
Gorai.005G020400 Gossypium raimondii HOM05D000070 ORTHO05D005931 1.2e-27 127.5 158 49.4
FAN17G2943 Fragaria x ananassa HOM05D003140 ORTHO05D005931 1.0e-26 124.4 156 47.4
Atru.chr3.1506 Acer truncatum HOM05D000070 ORTHO05D005931 2.3e-26 123.2 79 73.4
ATR0743G258 Amborella trichopoda HOM05D000070 ORTHO05D005931 5.1e-26 122.1 226 35.4
arahy.Tifrunner.gnm1.ann1.BWA67Y Arachis hypogaea HOM05D001957 ORTHO05D005931 1.5e-25 120.6 185 38.4
arahy.Tifrunner.gnm1.ann1.D659VP Arachis hypogaea HOM05D000070 ORTHO05D005931 1.4e-23 114.0 85 62.4
FvH4_4g10720 Fragaria vesca HOM05D000070 ORTHO05D005931 1.8e-23 113.6 76 71.1
CDE07G0988 Ceratophyllum demersum HOM05D000070 ORTHO05D005931 2.4e-23 113.2 135 49.6
AUR62002296 Chenopodium quinoa HOM05D000070 ORTHO05D005931 1.2e-22 110.9 118 54.2
MBI11_g13788_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D005931 7.7e-22 108.2 89 57.3
QL01p053543 Quercus lobata HOM05D000070 ORTHO05D005931 3.0e-18 96.3 83 66.3
DCAR_031357 Daucus carota HOM05D000070 ORTHO05D005931 3.7e-16 89.4 69 63.8
arahy.Tifrunner.gnm1.ann1.H147SP Arachis hypogaea HOM05D000070 ORTHO05D016631 3.8e-13 79.3 54 68.5
Lsat_1_v5_gn_6_91280 Lactuca sativa HOM05D000070 ORTHO05D005931 2.5e-12 76.6 65 60.0
Mapoly0028s0109 Marchantia polymorpha HOM05D000070 ORTHO05D005931 4.7e-11 72.4 251 27.9
Dinv01498 Davidia involucrata HOM05D000070 ORTHO05D184184 8.0e-11 71.6 111 42.3
FAN23G0821 Fragaria x ananassa HOM05D000070 ORTHO05D005931 4.5e-06 55.8 74 39.2


User provided reference genes

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