Gene: Thecc.04G186200

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.04G186200
  • Transcript Identifier Thecc.04G186200.2
  • Gene Type Coding gene
  • Location Chromosome_4 : 27819624-27828902 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.04G186200.v2.1
  • pacid 42020779
  • ancestorIdentifier Thecc1EG020130.CGDv1.1
  • ancestorIdentifier Thecc1EG020130t2.CGDv1.1

Descriptions

  • Description Cell division cycle protein 48-related / CDC48-related
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031936
ISO
PLAZA Integrative Orthologynegative regulation of chromatin silencing AT1G05910
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G05910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G05910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001487 Bromodomain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR036427 Bromodomain-like superfamily
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
Mapman id Description
12.5.2.6.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.BRAT1-BRP1 anti-silencing regulator complex.component BRAT1