Gene: Lsat_1_v5_gn_3_121920

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_3_121920
  • Transcript Identifier Lsat_1_v5_gn_3_121920.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_3 : 204239308-204244360 : positive

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_3_121920.v5
  • pacid 38916923

Descriptions

  • Description PF01695 - IstB-like ATP binding protein (IstB_IS21)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031936
ISO
PLAZA Integrative Orthologynegative regulation of chromatin silencing AT1G05910
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G05910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G05910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001487 Bromodomain
IPR036427 Bromodomain-like superfamily
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
IPR003959 ATPase, AAA-type, core
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
12.5.2.6.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.BRAT1-BRP1 anti-silencing regulator complex.component BRAT1