Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22801 Beta vulgaris HOM05D001807 ORTHO05D090263 4.8e-114 414.5 202 100.0
EL10Ac9g22819 Beta vulgaris HOM05D001807 ORTHO05D002044 6.5e-10 68.6 118 41.5
AUR62015118 Chenopodium quinoa HOM05D001807 ORTHO05D002044 8.4e-10 68.2 98 46.9
AL3G21790 Arabidopsis lyrata HOM05D001807 ORTHO05D002044 1.1e-09 67.8 103 44.7
AT3G10420 Arabidopsis thaliana HOM05D001807 ORTHO05D002044 1.1e-09 67.8 103 44.7
Carub.0003s0961 Capsella rubella HOM05D001807 ORTHO05D002044 1.9e-09 67.0 103 44.7
Aa31LG3G3030 Aethionema arabicum HOM05D001807 ORTHO05D002044 2.5e-09 66.6 103 43.7
Nn6g35251 Nelumbo nucifera HOM05D001807 ORTHO05D002044 2.5e-09 66.6 103 45.6
BcaB04g21212 Brassica carinata HOM05D001807 ORTHO05D002044 5.5e-09 65.5 103 42.7
CARHR084910 Cardamine hirsuta HOM05D001807 ORTHO05D002044 5.5e-09 65.5 103 42.7
AUR62017581 Chenopodium quinoa HOM05D001807 ORTHO05D002044 5.5e-09 65.5 98 45.9
Gohir.A10G201300 Gossypium hirsutum HOM05D001807 ORTHO05D002044 5.5e-09 65.5 103 43.7
Gorai.011G235200 Gossypium raimondii HOM05D001807 ORTHO05D002044 5.5e-09 65.5 103 43.7
Ah.01g001860 Amaranthus hybridus HOM05D001807 ORTHO05D002044 7.1e-09 65.1 103 43.7
Thhalv10020197m.g Eutrema salsugineum HOM05D001807 ORTHO05D002044 7.1e-09 65.1 103 43.7
Lj5g0007344 Lotus japonicus HOM05D001807 ORTHO05D002044 7.1e-09 65.1 103 42.7
BcaC05g29469 Brassica carinata HOM05D001807 ORTHO05D002044 9.3e-09 64.7 98 44.9
A05p38740 Brassica napus HOM05D001807 ORTHO05D002044 9.3e-09 64.7 103 42.7
C05p57750 Brassica napus HOM05D001807 ORTHO05D002044 9.3e-09 64.7 103 42.7
BolC5t34432H Brassica oleracea HOM05D001807 ORTHO05D002044 9.3e-09 64.7 103 42.7
BraA05t22665Z Brassica rapa HOM05D001807 ORTHO05D002044 9.3e-09 64.7 103 42.7
Hund24219 Selenicereus undatus HOM05D001807 ORTHO05D002044 9.3e-09 64.7 102 39.2
CSS0012751 Camellia sinensis var. sinensis HOM05D001807 ORTHO05D002044 1.2e-08 64.3 103 41.7
CSS0026586 Camellia sinensis var. sinensis HOM05D001807 ORTHO05D002044 1.2e-08 64.3 103 41.7
ClCG08G007800 Citrullus lanatus HOM05D001807 ORTHO05D002044 1.2e-08 64.3 103 41.7
CsaV3_2G020890 Cucumis sativus L. HOM05D001807 ORTHO05D002044 1.2e-08 64.3 103 41.7
Lsat_1_v5_gn_9_69640 Lactuca sativa HOM05D001807 ORTHO05D002044 1.2e-08 64.3 140 37.1
Phvul.007G025200 Phaseolus vulgaris HOM05D001807 ORTHO05D002044 1.2e-08 64.3 118 39.0
VMungo0720G1646 Vigna mungo HOM05D001807 ORTHO05D002044 1.2e-08 64.3 118 39.0
Duzib106G0034 Durio zibethinus HOM05D001807 ORTHO05D002044 1.6e-08 63.9 103 41.7
Sed0013593 Sechium edule HOM05D001807 ORTHO05D002044 1.6e-08 63.9 103 41.7
Hund04590 Selenicereus undatus HOM05D001807 ORTHO05D002044 1.6e-08 63.9 102 42.2
Sc06g0002060 Simmondsia chinensis HOM05D001807 ORTHO05D002044 1.6e-08 63.9 118 39.8
Thecc.10G086300 Theobroma cacao HOM05D001807 ORTHO05D002044 1.6e-08 63.9 103 42.7
EL10Ac9g22792 Beta vulgaris HOM05D001807 ORTHO05D002044 2.1e-08 63.5 38 78.9
Ciclev10030851m.g Citrus clementina HOM05D001807 ORTHO05D002044 2.1e-08 63.5 102 44.1
Gohir.D10G209100 Gossypium hirsutum HOM05D001807 ORTHO05D002044 2.1e-08 63.5 103 42.7
Ca_11193_v3 Cicer arietinum L. HOM05D001807 ORTHO05D002044 2.7e-08 63.2 118 37.3
PGR044G2472 Punica granatum HOM05D001807 ORTHO05D002044 2.7e-08 63.2 118 39.0
Dinv36384 Davidia involucrata HOM05D001807 ORTHO05D002044 3.5e-08 62.8 103 41.7
Sp3g08700 Schrenkiella parvula HOM05D001807 ORTHO05D002044 3.5e-08 62.8 98 43.9
THA.LOC104823203 Tarenaya hassleriana HOM05D001807 ORTHO05D002044 3.5e-08 62.8 102 44.1
CiPaw.01G267600 Carya illinoinensis HOM05D001807 ORTHO05D002044 4.6e-08 62.4 103 40.8
COL.COLO4_36550 Corchorus olitorius HOM05D001807 ORTHO05D002044 4.6e-08 62.4 103 40.8
MBI01_g31370_MAGBIO Magnolia biondii HOM05D001807 ORTHO05D002044 4.6e-08 62.4 103 42.7
TAR636G3645 Trochodendron aralioides HOM05D001807 ORTHO05D002044 4.6e-08 62.4 98 41.8
Glyma.20G113300 Glycine max HOM05D001807 ORTHO05D002044 6.1e-08 62.0 118 38.1
Atru.chr12.872 Acer truncatum HOM05D001807 ORTHO05D002044 7.9e-08 61.6 103 41.7
Cpa.g.sc53.144 Carica papaya HOM05D001807 ORTHO05D002044 7.9e-08 61.6 103 41.7
PSO339G3966 Papaver somniferum HOM05D001807 ORTHO05D002044 7.9e-08 61.6 103 42.7
Eucgr.J01045 Eucalyptus grandis HOM05D001807 ORTHO05D002044 1.0e-07 61.2 98 44.9
Potri.010G228600 Populus trichocarpa HOM05D001807 ORTHO05D002044 1.0e-07 61.2 103 39.8
Cfa001802 Carpinus fangiana HOM05D001807 ORTHO05D002044 1.3e-07 60.8 118 37.3
Haze_16749 Corylus avellana HOM05D001807 ORTHO05D002044 1.3e-07 60.8 118 37.3
MELO3C019832.2 Cucumis melo HOM05D001807 ORTHO05D002044 1.3e-07 60.8 101 41.6
Glyma.10G276400 Glycine max HOM05D001807 ORTHO05D002044 1.3e-07 60.8 118 38.1
TWI38G1273 Tripterygium wilfordii HOM05D001807 ORTHO05D002044 1.3e-07 60.8 102 42.2
GSVIVG01016194001 Vitis vinifera HOM05D001807 ORTHO05D002044 1.3e-07 60.8 118 39.0
Actinidia34799 Actinidia chinensis HOM05D001807 ORTHO05D002044 1.8e-07 60.5 98 41.8
CDE02G4584 Ceratophyllum demersum HOM05D001807 ORTHO05D002044 1.8e-07 60.5 98 40.8
Cc02_g10800 Coffea canephora HOM05D001807 ORTHO05D002044 1.8e-07 60.5 102 42.2
FAN01G1128 Fragaria x ananassa HOM05D001807 ORTHO05D002044 1.8e-07 60.5 118 38.1
FAN03G3235 Fragaria x ananassa HOM05D001807 ORTHO05D002044 1.8e-07 60.5 118 38.1
QL08p053655 Quercus lobata HOM05D001807 ORTHO05D002044 1.8e-07 60.5 118 38.1
RcHm_v2.0_Chr1g0362311 Rosa chinensis HOM05D001807 ORTHO05D002044 1.8e-07 60.5 118 38.1
Sabra10G0177300 Salix brachista HOM05D001807 ORTHO05D002044 1.8e-07 60.5 103 39.8
TAR633G0552 Trochodendron aralioides HOM05D001807 ORTHO05D002044 1.8e-07 60.5 103 40.8
Actinidia38877 Actinidia chinensis HOM05D001807 ORTHO05D002044 2.3e-07 60.1 98 41.8
Manes.07G094300 Manihot esculenta HOM05D001807 ORTHO05D002044 2.3e-07 60.1 118 38.1
Rhsim09G0146900 Rhododendron simsii HOM05D001807 ORTHO05D002044 2.3e-07 60.1 103 39.8
DCAR_019064 Daucus carota HOM05D001807 ORTHO05D002044 3.0e-07 59.7 103 40.8
ECA232G3154 Erigeron canadensis HOM05D001807 ORTHO05D002044 3.0e-07 59.7 103 39.8
HanXRQChr13g0404501 Helianthus annuus HOM05D001807 ORTHO05D002044 3.0e-07 59.7 103 40.8
vmacro10246 Vaccinium macrocarpon HOM05D001807 ORTHO05D002044 3.0e-07 59.7 98 41.8
Atru.chr12.873 Acer truncatum HOM05D001807 ORTHO05D002044 3.9e-07 59.3 118 39.0
ATR0665G476 Amborella trichopoda HOM05D001807 ORTHO05D002044 3.9e-07 59.3 119 37.8
Aqoxy1G01126 Aquilegia oxysepala HOM05D001807 ORTHO05D002044 3.9e-07 59.3 103 38.8
Prupe.2G206900 Prunus persica HOM05D001807 ORTHO05D002044 3.9e-07 59.3 118 37.3
HPP92_010176 Vanilla planifolia HOM05D001807 ORTHO05D002044 3.9e-07 59.3 98 41.8
arahy.Tifrunner.gnm1.ann1.7Y3RHD Arachis hypogaea HOM05D001807 ORTHO05D002044 5.1e-07 58.9 118 35.6
CANSAT56G2515 Cannabis sativa HOM05D001807 ORTHO05D002044 5.1e-07 58.9 103 40.8
FvH4_7g18530 Fragaria vesca HOM05D001807 ORTHO05D002044 5.1e-07 58.9 118 37.3
FAN06G1750 Fragaria x ananassa HOM05D001807 ORTHO05D002044 5.1e-07 58.9 118 37.3
FAN06G2865 Fragaria x ananassa HOM05D001807 ORTHO05D002044 5.1e-07 58.9 118 37.3
FAN10G3933 Fragaria x ananassa HOM05D001807 ORTHO05D002044 5.1e-07 58.9 118 37.3
CBR_g23317 Chara braunii HOM05D001807 ORTHO05D002044 6.7e-07 58.5 103 37.9
QL03p058546 Quercus lobata HOM05D001807 ORTHO05D002044 6.7e-07 58.5 118 36.4
PGSC0003DMG400031081 Solanum tuberosum HOM05D001807 ORTHO05D002044 6.7e-07 58.5 103 40.8
SMO116G0013 Selaginella moellendorffii HOM05D001807 ORTHO05D002044 8.7e-07 58.2 97 37.1
CAN.G321.50 Capsicum annuum HOM05D001807 ORTHO05D002044 1.1e-06 57.8 102 41.2
FAN10G1388 Fragaria x ananassa HOM05D001807 ORTHO05D002044 1.1e-06 57.8 118 36.4
MD01G1101700 Malus domestica HOM05D001807 ORTHO05D002044 1.1e-06 57.8 118 38.1
MD07G1168300 Malus domestica HOM05D001807 ORTHO05D002044 1.1e-06 57.8 118 36.4
Peaxi162Scf00145g00812 Petunia axillaris HOM05D001807 ORTHO05D002044 1.1e-06 57.8 102 41.2
Solyc11g008250.2 Solanum lycopersicum HOM05D001807 ORTHO05D002044 1.1e-06 57.8 102 41.2
Sopen11g004060 Solanum pennellii HOM05D001807 ORTHO05D002044 1.1e-06 57.8 102 41.2
Os07g0187400 Oryza sativa ssp. japonica HOM05D001807 ORTHO05D002044 1.5e-06 57.4 103 39.8
C09p61620 Brassica napus HOM05D001807 ORTHO05D002044 1.9e-06 57.0 98 40.8
BolC9t59000H Brassica oleracea HOM05D001807 ORTHO05D002044 1.9e-06 57.0 98 40.8
AagrBONN_evm.TU.Sc2ySwM_228.5732 Anthoceros agrestis HOM05D001807 ORTHO05D002044 2.5e-06 56.6 102 36.3
Pp3c14_10860 Physcomitrium patens HOM05D001807 ORTHO05D002044 2.5e-06 56.6 101 38.6
SEGI_17700 Sequoiadendron giganteum HOM05D001807 ORTHO05D002044 2.5e-06 56.6 102 38.2
CDE05G0400 Ceratophyllum demersum HOM05D001807 ORTHO05D002044 3.3e-06 56.2 122 36.1
Lalb_Chr06g0166191 Lupinus albus HOM05D001807 ORTHO05D002044 3.3e-06 56.2 118 37.3
Mapoly0010s0157 Marchantia polymorpha HOM05D001807 ORTHO05D002044 3.3e-06 56.2 102 36.3
Psat6g229720 Pisum sativum HOM05D001807 ORTHO05D002044 3.3e-06 56.2 103 38.8
Migut.F01708 Erythranthe guttata HOM05D001807 ORTHO05D002044 4.3e-06 55.8 118 35.6
MSTRG.393 Avicennia marina HOM05D001807 ORTHO05D002044 5.7e-06 55.5 102 39.2
MBI07_g17043_MAGBIO Magnolia biondii HOM05D001807 ORTHO05D002044 5.7e-06 55.5 103 39.8
Medtr1g111400 Medicago truncatula HOM05D001807 ORTHO05D002044 5.7e-06 55.5 98 40.8
Nitab4.5_0001450g0010 Nicotiana tabacum HOM05D001807 ORTHO05D002044 5.7e-06 55.5 117 36.8
Oeu013851.1 Olea europaea HOM05D001807 ORTHO05D002044 5.7e-06 55.5 102 38.2
Hund24224 Selenicereus undatus HOM05D001807 ORTHO05D002044 5.7e-06 55.5 98 38.8
Lj3C938G2 Lonicera japonica HOM05D001807 ORTHO05D002044 7.4e-06 55.1 110 39.1
EL10Ac9g22803 Beta vulgaris HOM05D001807 ORTHO05D021571 9.7e-06 54.7 34 76.5
ECA236G0336 Erigeron canadensis HOM05D001807 ORTHO05D002044 9.7e-06 54.7 97 41.2
TPR.G26285 Trifolium pratense HOM05D001807 ORTHO05D002044 9.7e-06 54.7 102 40.2
unitig_899.g15042 Utricularia gibba HOM05D001807 ORTHO05D002044 9.7e-06 54.7 118 33.1
Zm00001eb116580 Zea mays HOM05D001807 ORTHO05D002044 9.7e-06 54.7 117 33.3


User provided reference genes

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