Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g22111 Beta vulgaris HOM05D003777 ORTHO05D004690 0.0e+00 1149.8 674 100.0
AUR62017151 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.9e-295 1018.8 675 86.2
AUR62035656 Chenopodium quinoa HOM05D003777 ORTHO05D004690 2.6e-289 998.4 675 85.2
Ah.10g034950 Amaranthus hybridus HOM05D003777 ORTHO05D004690 3.5e-270 934.9 675 80.0
Hund25014 Selenicereus undatus HOM05D003777 ORTHO05D004690 9.0e-250 867.1 658 72.9
CiPaw.05G173500 Carya illinoinensis HOM05D003777 ORTHO05D004690 2.5e-223 779.2 628 69.3
GSVIVG01010320001 Vitis vinifera HOM05D003777 ORTHO05D004690 1.5e-220 770.0 639 70.0
QL03p055332 Quercus lobata HOM05D003777 ORTHO05D004690 2.6e-220 769.2 611 69.6
TAR374G1267 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.7e-219 766.5 641 65.7
TAR374G0928 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.8e-219 765.8 641 65.7
CANSAT01G1767 Cannabis sativa HOM05D003777 ORTHO05D004690 2.4e-218 762.7 636 66.8
Nitab4.5_0000492g0120 Nicotiana tabacum HOM05D003777 ORTHO05D004690 9.1e-218 760.8 683 62.8
vmacro01091 Vaccinium macrocarpon HOM05D003777 ORTHO05D004690 1.2e-217 760.4 666 66.7
CSS0004768 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 1.6e-217 760.0 614 67.8
Actinidia08096 Actinidia chinensis HOM05D003777 ORTHO05D004690 4.5e-217 758.4 656 68.3
Cpa.g.sc86.2 Carica papaya HOM05D003777 ORTHO05D004690 1.3e-216 756.9 659 68.6
Nitab4.5_0002026g0090 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.7e-216 756.5 683 63.0
Solyc11g062270.2 Solanum lycopersicum HOM05D003777 ORTHO05D004690 3.8e-216 755.4 671 64.1
Dinv18168 Davidia involucrata HOM05D003777 ORTHO05D004690 5.0e-216 755.0 686 63.1
Sabra06G0166800 Salix brachista HOM05D003777 ORTHO05D004690 5.0e-216 755.0 630 67.3
Hma1.2p1_0079F.1_g041650 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 1.5e-215 753.4 679 66.6
Manes.13G014300 Manihot esculenta HOM05D003777 ORTHO05D004690 1.5e-215 753.4 630 69.7
Cfa009302 Carpinus fangiana HOM05D003777 ORTHO05D004690 3.2e-215 752.3 631 69.6
Sopen11g024250 Solanum pennellii HOM05D003777 ORTHO05D004690 9.4e-215 750.7 671 64.1
TWI36G1566 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 2.1e-214 749.6 627 65.1
TPR.G17105 Trifolium pratense HOM05D003777 ORTHO05D004690 8.0e-214 747.7 675 67.7
Glyma.08G101100 Glycine max HOM05D003777 ORTHO05D004690 1.8e-213 746.5 628 69.6
Potri.006G216400 Populus trichocarpa HOM05D003777 ORTHO05D004690 3.0e-213 745.7 676 63.9
TWI75G0300 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 4.0e-213 745.3 629 65.3
Gohir.D05G312600 Gossypium hirsutum HOM05D003777 ORTHO05D004690 5.2e-213 745.0 677 66.0
Medtr8g079990 Medicago truncatula HOM05D003777 ORTHO05D004690 5.2e-213 745.0 629 66.9
Ca_18071_v3 Cicer arietinum L. HOM05D003777 ORTHO05D004690 8.8e-213 744.2 675 64.9
Phvul.002G176900 Phaseolus vulgaris HOM05D003777 ORTHO05D004690 1.2e-212 743.8 675 64.3
Manes.12G016400 Manihot esculenta HOM05D003777 ORTHO05D004690 1.5e-212 743.4 630 65.9
Dinv11003 Davidia involucrata HOM05D003777 ORTHO05D004690 2.0e-212 743.0 676 64.9
Oeu015952.1 Olea europaea HOM05D003777 ORTHO05D004690 2.0e-212 743.0 676 63.2
PSO170G4787 Papaver somniferum HOM05D003777 ORTHO05D004690 2.0e-212 743.0 675 62.2
Sp5g22670 Schrenkiella parvula HOM05D003777 ORTHO05D004690 4.4e-212 741.9 675 62.4
Glyma.05G144700 Glycine max HOM05D003777 ORTHO05D004690 9.8e-212 740.7 628 65.3
THA.LOC104825526 Tarenaya hassleriana HOM05D003777 ORTHO05D004690 1.3e-211 740.3 676 63.0
Eucgr.B03455 Eucalyptus grandis HOM05D003777 ORTHO05D004690 1.4e-210 736.9 683 66.5
A07p34190 Brassica napus HOM05D003777 ORTHO05D004690 1.8e-210 736.5 677 65.7
Gohir.A05G311500 Gossypium hirsutum HOM05D003777 ORTHO05D004690 1.8e-210 736.5 677 65.7
Psat7g080080 Pisum sativum HOM05D003777 ORTHO05D004690 3.1e-210 735.7 686 62.2
MD13G1110100 Malus domestica HOM05D003777 ORTHO05D004690 7.0e-210 734.6 684 64.6
Aa31LG4G12090 Aethionema arabicum HOM05D003777 ORTHO05D004690 1.2e-209 733.8 660 63.0
MSTRG.12471 Avicennia marina HOM05D003777 ORTHO05D004690 1.2e-209 733.8 623 64.4
Gorai.009G334100 Gossypium raimondii HOM05D003777 ORTHO05D004690 2.7e-209 732.6 678 65.3
PSO063G1619 Papaver somniferum HOM05D003777 ORTHO05D004690 4.5e-209 731.9 631 63.7
Thecc.02G272700 Theobroma cacao HOM05D003777 ORTHO05D004690 5.9e-209 731.5 676 61.4
MELO3C011898.2 Cucumis melo HOM05D003777 ORTHO05D004690 7.7e-209 731.1 639 66.8
CsaV3_5G030580 Cucumis sativus L. HOM05D003777 ORTHO05D004690 1.0e-208 730.7 676 64.5
arahy.Tifrunner.gnm1.ann1.9WV3XJ Arachis hypogaea HOM05D003777 ORTHO05D004690 2.9e-208 729.2 667 65.2
BcaB03g15177 Brassica carinata HOM05D003777 ORTHO05D004690 2.9e-208 729.2 677 61.7
Lsat_1_v5_gn_2_96961 Lactuca sativa HOM05D003777 ORTHO05D004690 3.8e-208 728.8 679 61.7
PGR102G0273 Punica granatum HOM05D003777 ORTHO05D004690 3.8e-208 728.8 674 66.0
arahy.Tifrunner.gnm1.ann1.238UV6 Arachis hypogaea HOM05D003777 ORTHO05D004690 5.0e-208 728.4 675 64.7
DCAR_021624 Daucus carota HOM05D003777 ORTHO05D004690 6.5e-208 728.0 639 62.1
Duzib268G0959 Durio zibethinus HOM05D003777 ORTHO05D004690 8.6e-208 727.6 676 64.2
MD16G1110000 Malus domestica HOM05D003777 ORTHO05D004690 1.1e-207 727.2 677 65.1
BcaC08g46176 Brassica carinata HOM05D003777 ORTHO05D004690 1.5e-207 726.9 677 62.0
C06p42580 Brassica napus HOM05D003777 ORTHO05D004690 1.5e-207 726.9 677 62.0
BolC6t39181H Brassica oleracea HOM05D003777 ORTHO05D004690 1.5e-207 726.9 677 62.0
Duzib248G0478 Durio zibethinus HOM05D003777 ORTHO05D004690 4.2e-207 725.3 678 64.9
SGA_v2.0_scaffold247G44863 Striga asiatica HOM05D003777 ORTHO05D004690 5.5e-207 724.9 704 59.8
Rhsim12G0035800 Rhododendron simsii HOM05D003777 ORTHO05D004690 6.1e-206 721.5 762 60.1
arahy.Tifrunner.gnm1.ann1.SED4J7 Arachis hypogaea HOM05D003777 ORTHO05D004690 1.4e-205 720.3 711 59.5
Lalb_Chr07g0187251 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-205 719.5 675 67.1
Thhalv10018246m.g Eutrema salsugineum HOM05D003777 ORTHO05D004690 3.0e-205 719.2 677 61.4
Lj4g0007172 Lotus japonicus HOM05D003777 ORTHO05D004690 8.9e-205 717.6 675 63.3
AL2G26380 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 1.2e-204 717.2 674 61.0
FvH4_4g24580 Fragaria vesca HOM05D003777 ORTHO05D004690 1.2e-204 717.2 682 64.7
RcHm_v2.0_Chr4g0431561 Rosa chinensis HOM05D003777 ORTHO05D004690 1.2e-204 717.2 681 65.1
RcHm_v2.0_Chr4g0431581 Rosa chinensis HOM05D003777 ORTHO05D004690 1.2e-204 717.2 681 65.1
VMungo0251G0828 Vigna mungo HOM05D003777 ORTHO05D004690 1.5e-204 716.8 719 63.1
ClCG05G026250 Citrullus lanatus HOM05D003777 ORTHO05D004690 2.6e-204 716.1 674 64.2
FAN12G3799 Fragaria x ananassa HOM05D003777 ORTHO05D004690 5.7e-204 714.9 682 64.5
Atru.chr11.2223 Acer truncatum HOM05D003777 ORTHO05D004690 9.8e-204 714.1 677 63.7
Peaxi162Scf00029g02527 Petunia axillaris HOM05D003777 ORTHO05D004690 9.8e-204 714.1 682 60.6
CAN.G487.1 Capsicum annuum HOM05D003777 ORTHO05D004690 1.3e-203 713.8 673 61.4
FAN07G0030 Fragaria x ananassa HOM05D003777 ORTHO05D004690 4.9e-203 711.8 674 64.1
Aqoxy5G03557 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.4e-202 710.3 686 60.5
Sed0005823 Sechium edule HOM05D003777 ORTHO05D004690 1.4e-202 710.3 632 61.9
AT1G67680 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 2.4e-202 709.5 686 59.8
A07p32470 Brassica napus HOM05D003777 ORTHO05D004690 2.4e-202 709.5 677 60.3
HanXRQChr04g0126141 Helianthus annuus HOM05D003777 ORTHO05D004690 3.1e-202 709.1 637 64.1
ECA233G1683 Erigeron canadensis HOM05D003777 ORTHO05D004690 7.0e-202 708.0 632 63.0
DCAR_021625 Daucus carota HOM05D003777 ORTHO05D004690 5.9e-201 704.9 646 61.1
FAN17G2971 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.7e-200 703.4 663 64.7
FAN22G1648 Fragaria x ananassa HOM05D003777 ORTHO05D004690 3.8e-200 702.2 682 63.6
arahy.Tifrunner.gnm1.ann1.35MH8V Arachis hypogaea HOM05D003777 ORTHO05D004690 3.3e-199 699.1 691 59.8
Migut.D00587 Erythranthe guttata HOM05D003777 ORTHO05D004690 2.8e-198 696.0 605 64.0
Carub.0002s1406 Capsella rubella HOM05D003777 ORTHO05D004690 3.6e-198 695.7 679 59.2
CARHR060270 Cardamine hirsuta HOM05D003777 ORTHO05D004690 1.5e-196 690.3 626 62.1
MBI11_g31858_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 5.8e-196 688.3 685 63.8
Ciclev10030955m.g Citrus clementina HOM05D003777 ORTHO05D004690 2.2e-195 686.4 629 65.8
HPP92_012793 Vanilla planifolia HOM05D003777 ORTHO05D004690 3.3e-191 672.5 678 60.5
CDE07G0923 Ceratophyllum demersum HOM05D003777 ORTHO05D004690 7.3e-191 671.4 676 59.2
Sc04g0009890 Simmondsia chinensis HOM05D003777 ORTHO05D004690 2.8e-190 669.5 513 77.8
Actinidia30683 Actinidia chinensis HOM05D003777 ORTHO05D004690 3.4e-188 662.5 664 59.5
AT1G67650 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 4.1e-186 655.6 685 55.8
BraA07t31048Z Brassica rapa HOM05D003777 ORTHO05D004690 1.2e-185 654.1 558 65.9
TPR.G27143 Trifolium pratense HOM05D003777 ORTHO05D004690 2.5e-183 646.4 552 63.6
CSS0018349 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 2.3e-181 639.8 509 67.0
Prupe.1G234800 Prunus persica HOM05D003777 ORTHO05D004690 2.0e-180 636.7 579 63.7
Nitab4.5_0002757g0020 Nicotiana tabacum HOM05D003777 ORTHO05D004690 7.5e-180 634.8 663 57.0
unitig_744.g24046 Utricularia gibba HOM05D003777 ORTHO05D004690 7.5e-180 634.8 691 55.1
Os01g0889000 Oryza sativa ssp. japonica HOM05D003777 ORTHO05D004690 8.3e-179 631.3 634 56.5
COL.COLO4_23602 Corchorus olitorius HOM05D003777 ORTHO05D004690 1.2e-174 617.5 639 55.7
ATR0824G106 Amborella trichopoda HOM05D003777 ORTHO05D004690 8.4e-171 604.7 687 54.7
Nitab4.5_0001925g0190 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.7e-168 597.0 609 56.0
BcaB03g15368 Brassica carinata HOM05D003777 ORTHO05D004690 7.3e-167 591.7 675 53.5
Sed0021346 Sechium edule HOM05D003777 ORTHO05D004690 1.2e-164 584.3 559 65.1
AL2G26340 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 3.2e-162 576.2 687 52.4
PGSC0003DMG400032494 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.9e-159 567.0 481 63.8
Lj2C633G4 Lonicera japonica HOM05D003777 ORTHO05D004690 9.6e-159 564.7 522 64.6
Carub.0002s1402 Capsella rubella HOM05D003777 ORTHO05D004690 1.3e-152 544.3 546 59.9
Lalb_Chr12g0206451 Lupinus albus HOM05D003777 ORTHO05D004690 1.0e-139 501.5 466 68.7
BolC2t08468H Brassica oleracea HOM05D003777 ORTHO05D004690 1.7e-139 500.7 640 49.4
Mapoly0007s0138 Marchantia polymorpha HOM05D003777 ORTHO05D004690 2.2e-139 500.4 629 45.5
Lalb_Chr12g0206431 Lupinus albus HOM05D003777 ORTHO05D004690 1.3e-136 491.1 459 68.4
SEGI_14731 Sequoiadendron giganteum HOM05D003777 ORTHO05D004690 3.7e-134 483.0 553 51.4
Zm00001eb145240 Zea mays HOM05D003777 ORTHO05D004690 1.4e-130 471.1 506 54.9
C06p38540 Brassica napus HOM05D003777 ORTHO05D004690 7.2e-130 468.8 451 57.2
Pp3c19_7700 Physcomitrium patens HOM05D003777 ORTHO05D004690 1.1e-127 461.5 694 40.9
CSS0034811 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 2.8e-126 456.8 411 64.0
SHI17928 Sapria himalayana HOM05D003777 ORTHO05D004690 7.9e-121 438.7 677 45.1
AUR62017138 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.0e-120 438.3 357 76.2
BolC6t38947H Brassica oleracea HOM05D003777 ORTHO05D004690 5.2e-112 409.5 383 57.7
CBR_g26341 Chara braunii HOM05D003777 ORTHO05D004690 5.7e-111 406.0 651 41.3
SMO356G0370 Selaginella moellendorffii HOM05D003777 ORTHO05D004690 1.8e-109 401.0 641 41.2
Lalb_Chr12g0206401 Lupinus albus HOM05D003777 ORTHO05D004690 2.4e-109 400.6 332 71.1
C02p23330 Brassica napus HOM05D003777 ORTHO05D004690 2.0e-100 370.9 422 51.4
TAR622G1358 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.3e-91 340.9 340 61.8
MCO13G157 Micromonas commoda HOM05D003777 ORTHO05D004690 2.3e-64 251.1 701 33.4
CSS0039153 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 2.6e-63 247.7 197 65.5
BraA07t30871Z Brassica rapa HOM05D003777 ORTHO05D004690 9.9e-63 245.7 208 60.1
ECA238G3243 Erigeron canadensis HOM05D003777 ORTHO05D004690 3.9e-59 233.8 224 57.1
Cre03.g182500 Chlamydomonas reinhardtii HOM05D003777 ORTHO05D004690 3.3e-58 230.7 709 30.7
Oeu007469.1 Olea europaea HOM05D003777 ORTHO05D004690 6.2e-57 226.5 314 48.1
Hma1.2p1_0075F.1_g039220 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 9.9e-55 219.2 260 51.9
TAR622G0547 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.1e-52 211.5 168 64.9
Nn4g21997 Nelumbo nucifera HOM05D003777 ORTHO05D004690 6.0e-52 209.9 189 65.6
PRCOL_00006597 Prasinoderma coloniale HOM05D003777 ORTHO05D004690 4.8e-49 200.3 610 30.7
Psat3g102200 Pisum sativum HOM05D003777 ORTHO05D004690 3.4e-47 194.1 151 68.9
PGSC0003DMG400024128 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.3e-46 192.2 185 58.4
Psat5g044680 Pisum sativum HOM05D003777 ORTHO05D004690 1.7e-46 191.8 151 68.9
Solyc10g044443.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 1.7e-46 191.8 177 58.8
Sopen01g018830 Solanum pennellii HOM05D003777 ORTHO05D004690 6.4e-46 189.9 177 59.3
PGSC0003DMG400024126 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.4e-45 188.7 158 68.4
PGSC0003DMG400017991 Solanum tuberosum HOM05D003777 ORTHO05D004690 3.5e-44 184.1 147 67.3
Aqoxy6G02118 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 8.4e-38 162.9 128 68.0
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 1.8e-35 155.2 119 68.9
Aqoxy6G02120 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 6.2e-33 146.7 136 64.7
CAN.G1295.1 Capsicum annuum HOM05D003777 ORTHO05D004690 3.1e-32 144.4 148 58.1
Sopen01g018820 Solanum pennellii HOM05D003777 ORTHO05D004690 4.2e-29 134.0 146 54.8
Psat3g103880 Pisum sativum HOM05D003777 ORTHO05D004690 5.1e-27 127.1 185 44.3
Lalb_Chr12g0206411 Lupinus albus HOM05D003777 ORTHO05D004690 1.1e-24 119.4 92 70.7
Lalb_Chr12g0206441 Lupinus albus HOM05D003777 ORTHO05D004690 1.1e-24 119.4 92 70.7
Lalb_Chr12g0206461 Lupinus albus HOM05D003777 ORTHO05D004690 1.1e-24 119.4 92 70.7
Lalb_Chr12g0206421 Lupinus albus HOM05D003777 ORTHO05D004690 9.0e-24 116.3 111 56.8
CAN.G1310.4 Capsicum annuum HOM05D003777 ORTHO05D004690 1.5e-23 115.5 92 68.5
TAR622G0255 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.7e-22 112.1 96 63.5
MBI11_g11081_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 2.2e-22 111.7 97 58.8
MBI11_g45427_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 1.4e-21 109.0 94 59.6
Aqoxy6G02119 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.9e-21 108.6 96 61.5
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 3.2e-21 107.8 94 58.5
C06p38550 Brassica napus HOM05D003777 ORTHO05D004690 8.2e-17 93.2 108 55.6
SHI17930 Sapria himalayana HOM05D003777 ORTHO05D012379 1.2e-15 89.4 93 50.5
BcaC03g14865 Brassica carinata HOM05D003777 ORTHO05D004690 7.7e-15 86.7 81 63.0
PGSC0003DMG400024133 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.0e-14 86.3 58 77.6
BcaC03g14858 Brassica carinata HOM05D003777 ORTHO05D004690 5.5e-13 80.5 79 55.7
SEGI_18986 Sequoiadendron giganteum HOM05D003777 ORTHO05D000001 9.4e-13 79.7 82 48.8
Solyc01g047580.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 1.6e-12 79.0 119 43.7
Nitab4.5_0004629g0100 Nicotiana tabacum HOM05D003777 ORTHO05D004690 4.6e-12 77.4 67 50.7
Psat4g130680 Pisum sativum HOM05D003777 ORTHO05D037365 6.1e-12 77.0 81 45.7
Psat2g135600 Pisum sativum HOM05D003438 ORTHO05D004235 1.7e-09 68.9 81 44.4
TAR625G1055 Trochodendron aralioides HOM05D003777 ORTHO05D012379 9.1e-08 63.2 47 61.7
Nitab4.5_0004750g0060 Nicotiana tabacum HOM05D003777 ORTHO05D012379 1.5e-07 62.4 49 55.1
MBI11_g46771_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D012379 2.6e-07 61.6 50 60.0
Hma1.2p1_0214F.1_g090690 Hydrangea macrophylla HOM05D003777 ORTHO05D012379 1.3e-06 59.3 47 57.4


User provided reference genes

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