Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g21025 Beta vulgaris HOM05D005041 ORTHO05D006003 5.3e-231 803.9 382 100.0
Ah.01g004760 Amaranthus hybridus HOM05D005041 ORTHO05D006003 6.1e-211 737.3 382 90.6
Atru.chr6.3564 Acer truncatum HOM05D005041 ORTHO05D006003 1.4e-183 646.4 383 78.1
Eucgr.K01189 Eucalyptus grandis HOM05D005041 ORTHO05D006003 2.7e-182 642.1 383 78.3
COL.COLO4_33676 Corchorus olitorius HOM05D005041 ORTHO05D006003 6.0e-182 641.0 382 78.3
GSVIVG01020787001 Vitis vinifera HOM05D005041 ORTHO05D006003 8.6e-181 637.1 383 78.1
Thecc.01G157600 Theobroma cacao HOM05D005041 ORTHO05D006003 2.5e-180 635.6 383 78.1
Ciclev10015615m.g Citrus clementina HOM05D005041 ORTHO05D006003 2.1e-179 632.5 381 76.6
Dinv26517 Davidia involucrata HOM05D005041 ORTHO05D006003 6.2e-179 630.9 380 77.1
Gorai.011G123100 Gossypium raimondii HOM05D005041 ORTHO05D006003 1.8e-178 629.4 384 77.6
PGR142G0148 Punica granatum HOM05D005041 ORTHO05D006003 4.0e-178 628.2 376 76.9
Gohir.A10G154500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 6.8e-178 627.5 384 77.1
DCAR_013571 Daucus carota HOM05D005041 ORTHO05D006003 8.9e-178 627.1 383 75.7
Gohir.D10G111500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 8.9e-178 627.1 384 77.3
CSS0038733 Camellia sinensis var. sinensis HOM05D005041 ORTHO05D006003 4.4e-177 624.8 383 75.5
Actinidia11183 Actinidia chinensis HOM05D005041 ORTHO05D006003 1.7e-176 622.9 383 74.9
Nn3g21016 Nelumbo nucifera HOM05D005041 ORTHO05D006003 2.4e-175 619.0 383 76.2
Cc05_g09060 Coffea canephora HOM05D005041 ORTHO05D006003 7.1e-175 617.5 384 76.0
Sed0005186 Sechium edule HOM05D005041 ORTHO05D006003 1.2e-174 616.7 383 74.9
Hma1.2p1_0178F.1_g078240 Hydrangea macrophylla HOM05D005041 ORTHO05D006003 1.6e-174 616.3 380 76.3
TWI63G0392 Tripterygium wilfordii HOM05D005041 ORTHO05D006003 1.6e-174 616.3 381 74.8
MELO3C031066.2 Cucumis melo HOM05D005041 ORTHO05D006003 3.5e-174 615.1 383 74.4
CsaV3_6G037940 Cucumis sativus L. HOM05D005041 ORTHO05D006003 1.0e-173 613.6 385 74.3
C03p20380 Brassica napus HOM05D005041 ORTHO05D006003 3.0e-173 612.1 372 75.8
BolC3t14416H Brassica oleracea HOM05D005041 ORTHO05D006003 3.0e-173 612.1 372 75.8
MSTRG.15060 Avicennia marina HOM05D005041 ORTHO05D006003 8.6e-173 610.5 382 74.1
Carub.0004s1211 Capsella rubella HOM05D005041 ORTHO05D006003 8.6e-173 610.5 374 77.5
BcaB01g04071 Brassica carinata HOM05D005041 ORTHO05D006003 1.9e-172 609.4 372 75.8
Sp4g13380 Schrenkiella parvula HOM05D005041 ORTHO05D006003 2.5e-172 609.0 372 75.8
A03p17270 Brassica napus HOM05D005041 ORTHO05D006003 4.3e-172 608.2 372 75.8
BraA03t11001Z Brassica rapa HOM05D005041 ORTHO05D006003 4.3e-172 608.2 372 75.8
Peaxi162Scf00828g00019 Petunia axillaris HOM05D005041 ORTHO05D006003 4.3e-172 608.2 383 74.2
AL283U10030 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 1.2e-171 606.7 374 77.0
AL4G25850 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 1.2e-171 606.7 374 77.0
PSO675G8631 Papaver somniferum HOM05D005041 ORTHO05D006003 2.8e-171 605.5 376 73.9
Solyc05g006470.4 Solanum lycopersicum HOM05D005041 ORTHO05D006003 2.8e-171 605.5 384 74.0
BcaC02g11169 Brassica carinata HOM05D005041 ORTHO05D006003 6.2e-171 604.4 372 75.8
C04p19760 Brassica napus HOM05D005041 ORTHO05D006003 6.2e-171 604.4 372 75.8
BolC4t23509H Brassica oleracea HOM05D005041 ORTHO05D006003 6.2e-171 604.4 372 75.8
PSO541G3312 Papaver somniferum HOM05D005041 ORTHO05D006003 1.1e-170 603.6 376 73.9
Manes.02G087100 Manihot esculenta HOM05D005041 ORTHO05D006003 3.1e-170 602.1 383 72.3
A05p14760 Brassica napus HOM05D005041 ORTHO05D006003 5.2e-170 601.3 372 75.5
HanXRQChr16g0518211 Helianthus annuus HOM05D005041 ORTHO05D006003 6.8e-170 600.9 385 73.2
BcaB02g10347 Brassica carinata HOM05D005041 ORTHO05D006003 8.9e-170 600.5 372 75.3
SGA_v2.0_scaffold8G04656 Striga asiatica HOM05D005041 ORTHO05D006003 1.2e-169 600.1 383 73.1
AT2G30910 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 1.5e-169 599.7 373 75.9
Migut.D00514 Erythranthe guttata HOM05D005041 ORTHO05D006003 2.0e-169 599.4 383 73.9
ECA234G0116 Erigeron canadensis HOM05D005041 ORTHO05D006003 1.7e-168 596.3 383 71.0
MD09G1156800 Malus domestica HOM05D005041 ORTHO05D006003 1.7e-168 596.3 392 72.4
Nitab4.5_0004310g0020 Nicotiana tabacum HOM05D005041 ORTHO05D006003 2.9e-168 595.5 422 68.5
Aqoxy1G01950 Aquilegia oxysepala HOM05D005041 ORTHO05D006003 3.8e-168 595.1 372 75.0
SGA_v2.0_scaffold1G00710 Striga asiatica HOM05D005041 ORTHO05D006003 3.8e-168 595.1 383 73.9
Hund00824 Selenicereus undatus HOM05D005041 ORTHO05D006003 8.4e-168 594.0 380 74.5
Lalb_Chr20g0114161 Lupinus albus HOM05D005041 ORTHO05D006003 5.4e-167 591.3 372 73.7
BraA05t20405Z Brassica rapa HOM05D005041 ORTHO05D006003 7.1e-167 590.9 374 74.3
Os02g0817200 Oryza sativa ssp. japonica HOM05D005041 ORTHO05D006003 7.1e-167 590.9 375 71.5
Lsat_1_v5_gn_4_52360 Lactuca sativa HOM05D005041 ORTHO05D006003 1.2e-166 590.1 387 71.8
ClCG09G022250 Citrullus lanatus HOM05D005041 ORTHO05D006003 3.0e-165 585.5 390 71.5
Manes.01G129200 Manihot esculenta HOM05D005041 ORTHO05D006003 2.5e-164 582.4 382 70.9
AT2G31300 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 3.3e-164 582.0 364 75.8
Zm00001eb258930 Zea mays HOM05D005041 ORTHO05D006003 1.3e-163 580.1 375 69.3
MBI06_g08528_MAGBIO Magnolia biondii HOM05D005041 ORTHO05D006003 6.2e-163 577.8 382 71.5
Aa31LG5G6010 Aethionema arabicum HOM05D005041 ORTHO05D006003 4.9e-160 568.2 404 68.1
A04p23600 Brassica napus HOM05D005041 ORTHO05D006003 2.4e-159 565.8 385 70.6
Sed0006581 Sechium edule HOM05D005041 ORTHO05D006003 2.4e-159 565.8 345 75.4
CDE10G0970 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 9.3e-159 563.9 372 71.2
vmacro12428 Vaccinium macrocarpon HOM05D005041 ORTHO05D006003 5.1e-157 558.1 388 70.6
unitig_37.g12857 Utricularia gibba HOM05D005041 ORTHO05D006003 8.7e-157 557.4 372 69.1
FAN14G1924 Fragaria x ananassa HOM05D000054 ORTHO05D006003 1.1e-154 550.4 360 72.2
TPR.G13543 Trifolium pratense HOM05D005041 ORTHO05D006003 1.8e-154 549.7 390 68.7
Dinv06276 Davidia involucrata HOM05D005041 ORTHO05D006003 3.4e-153 545.4 331 77.9
TAR626G0242 Trochodendron aralioides HOM05D005041 ORTHO05D006003 9.9e-153 543.9 383 68.1
Cfa022568 Carpinus fangiana HOM05D005041 ORTHO05D006003 6.4e-152 541.2 383 67.9
CiPaw.04G135200 Carya illinoinensis HOM05D005041 ORTHO05D006003 1.1e-151 540.4 383 67.6
Glyma.10G216300 Glycine max HOM05D005041 ORTHO05D006003 7.1e-151 537.7 335 74.0
Thhalv10017625m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 1.2e-150 537.0 320 79.1
CDE10G1309 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 2.7e-150 535.8 372 68.8
FAN02G2360 Fragaria x ananassa HOM05D000054 ORTHO05D006003 1.3e-149 533.5 387 66.9
HPP92_025809 Vanilla planifolia HOM05D005041 ORTHO05D006003 1.3e-149 533.5 378 66.4
BcaB06g28392 Brassica carinata HOM05D005041 ORTHO05D006003 1.1e-148 530.4 339 74.3
C04p60050 Brassica napus HOM05D005041 ORTHO05D006003 1.9e-148 529.6 358 72.1
THA.LOC104826236 Tarenaya hassleriana HOM05D005041 ORTHO05D006003 2.5e-148 529.3 372 66.7
Haze_13460 Corylus avellana HOM05D005041 ORTHO05D006003 9.6e-148 527.3 391 65.5
Lju124A34T49 Lonicera japonica HOM05D005041 ORTHO05D006003 2.1e-147 526.2 281 85.1
VMungo0540G2345 Vigna mungo HOM05D005041 ORTHO05D006003 4.8e-147 525.0 339 72.0
BolC4t27508H Brassica oleracea HOM05D005041 ORTHO05D006003 1.8e-146 523.1 368 69.8
Prupe.3G170000 Prunus persica HOM05D005041 ORTHO05D006003 4.0e-146 521.9 383 66.1
Potri.014G141700 Populus trichocarpa HOM05D005041 ORTHO05D006003 7.6e-145 517.7 383 66.1
BraA04t17886Z Brassica rapa HOM05D005041 ORTHO05D006003 1.3e-144 516.9 365 70.4
MD17G1143300 Malus domestica HOM05D005041 ORTHO05D006003 2.5e-143 512.7 383 64.8
RcHm_v2.0_Chr2g0150441 Rosa chinensis HOM05D005041 ORTHO05D006003 2.5e-143 512.7 383 64.0
Sc12g0003800 Simmondsia chinensis HOM05D005041 ORTHO05D006003 2.5e-143 512.7 383 66.3
FAN09G1464 Fragaria x ananassa HOM05D000054 ORTHO05D006003 9.3e-143 510.8 372 64.8
QL08p043305 Quercus lobata HOM05D005041 ORTHO05D006003 3.9e-141 505.4 382 63.9
Nitab4.5_0002312g0010 Nicotiana tabacum HOM05D005041 ORTHO05D006003 1.6e-139 500.0 383 64.0
Lj2A374G38 Lonicera japonica HOM05D005041 ORTHO05D006003 1.2e-137 493.8 361 67.9
CANSAT11G1484 Cannabis sativa HOM05D005041 ORTHO05D006003 4.5e-137 491.9 384 62.8
Medtr3g049070 Medicago truncatula HOM05D005041 ORTHO05D006003 2.5e-135 486.1 372 62.9
Glyma.18G103800 Glycine max HOM05D005041 ORTHO05D006003 2.1e-134 483.0 372 61.8
Lj6g0019726 Lotus japonicus HOM05D005041 ORTHO05D006003 2.1e-134 483.0 372 62.6
Glyma.08G311700 Glycine max HOM05D005041 ORTHO05D006003 4.6e-134 481.9 372 61.8
Phvul.005G127400 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 1.0e-133 480.7 372 61.6
Ca_14633_v3 Cicer arietinum L. HOM05D005041 ORTHO05D006003 1.8e-133 479.9 372 62.1
SMO364G0091 Selaginella moellendorffii HOM05D005041 ORTHO05D006003 1.8e-133 479.9 378 57.7
Cpa.g.sc50.61 Carica papaya HOM05D005041 ORTHO05D006003 2.3e-133 479.6 253 86.2
Psat5g186840 Pisum sativum HOM05D005041 ORTHO05D006003 1.5e-132 476.9 373 62.7
VMungo1080G0034 Vigna mungo HOM05D005041 ORTHO05D006003 3.3e-132 475.7 372 60.8
AUR62031794 Chenopodium quinoa HOM05D005041 ORTHO05D006003 3.1e-130 469.2 310 74.8
Sopen05g002420 Solanum pennellii HOM05D005041 ORTHO05D006003 2.0e-129 466.5 257 83.3
arahy.Tifrunner.gnm1.ann1.5LHA9P Arachis hypogaea HOM05D005041 ORTHO05D006003 1.0e-128 464.2 382 59.4
arahy.Tifrunner.gnm1.ann1.RC242R Arachis hypogaea HOM05D005041 ORTHO05D006003 1.0e-128 464.2 382 59.4
AagrBONN_evm.TU.Sc2ySwM_228.2899 Anthoceros agrestis HOM05D005041 ORTHO05D006003 2.5e-124 449.5 367 56.9
Phvul.006G036500 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 1.1e-122 444.1 372 57.8
Mapoly0116s0052 Marchantia polymorpha HOM05D005041 ORTHO05D006003 4.1e-122 442.2 386 53.1
Zm00001eb191400 Zea mays HOM05D005041 ORTHO05D006003 4.1e-122 442.2 253 77.5
Duzib187G1062 Durio zibethinus HOM05D005041 ORTHO05D006003 2.0e-121 439.9 383 59.3
Pp3c19_12930 Physcomitrium patens HOM05D005041 ORTHO05D006003 1.4e-119 433.7 375 54.1
FvH4_6g37551 Fragaria vesca HOM05D005041 ORTHO05D006003 1.2e-118 430.6 281 70.8
Mapoly0090s0056 Marchantia polymorpha HOM05D005041 ORTHO05D006003 2.3e-117 426.4 386 51.6
Pp3c18_4810 Physcomitrium patens HOM05D005041 ORTHO05D006003 7.4e-116 421.4 383 52.7
AUR62024003 Chenopodium quinoa HOM05D005041 ORTHO05D006003 2.9e-112 409.5 309 66.3
ATR0787G051 Amborella trichopoda HOM05D005041 ORTHO05D006003 8.8e-109 397.9 224 80.4
Thhalv10017010m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 7.4e-108 394.8 375 55.5
CBR_g18699 Chara braunii HOM05D005041 ORTHO05D006003 2.0e-81 307.0 526 35.2
CARHR124910 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.1e-74 284.6 147 89.1
CARHR124390 Cardamine hirsuta HOM05D005041 ORTHO05D006003 1.6e-73 280.8 144 90.3
SalBow4G0308 Salvia bowleyana HOM05D005041 ORTHO05D006003 3.5e-73 279.6 217 64.5
Nn6g34435 Nelumbo nucifera HOM05D005041 ORTHO05D006003 1.0e-72 278.1 217 63.1
Sopen05g002410 Solanum pennellii HOM05D005041 ORTHO05D006003 4.4e-68 262.7 275 51.3
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 2.4e-66 256.9 368 37.8
Sabra14G0106900 Salix brachista HOM05D005041 ORTHO05D006003 9.5e-63 245.0 224 58.0
SHI23137 Sapria himalayana HOM05D005041 ORTHO05D006003 1.5e-55 221.1 134 71.6
Oeu032123.1 Olea europaea HOM05D005041 ORTHO05D006003 3.8e-51 206.5 150 64.7
Actinidia12824 Actinidia chinensis HOM05D005041 ORTHO05D006003 9.3e-50 201.8 157 63.7
TAR383G0169 Trochodendron aralioides HOM05D005041 ORTHO05D006003 4.9e-43 179.5 111 70.3
SEGI_31471 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 1.9e-39 167.5 143 54.5
Cre16.g648100 Chlamydomonas reinhardtii HOM05D005041 ORTHO05D006003 4.8e-38 162.9 233 36.1
SEGI_36522 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 3.9e-32 143.3 92 68.5
Haze_27289 Corylus avellana HOM05D005041 ORTHO05D006003 6.7e-32 142.5 285 31.6
Duzib147G0812 Durio zibethinus HOM05D005041 ORTHO05D006003 1.2e-25 121.7 147 46.9
BolC2t10705H Brassica oleracea HOM05D005041 ORTHO05D006003 1.1e-23 115.2 57 86.0
Duzib147G0224 Durio zibethinus HOM05D005041 ORTHO05D006003 2.8e-22 110.5 59 83.1
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 1.8e-21 107.8 66 74.2
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 7.4e-15 85.9 80 57.5
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 1.6e-14 84.7 48 83.3
CARHR285180 Cardamine hirsuta HOM05D005041 ORTHO05D006003 8.2e-14 82.4 52 63.5
CARHR059870 Cardamine hirsuta HOM05D005041 ORTHO05D006003 2.9e-11 73.9 57 63.2
arahy.Tifrunner.gnm1.ann1.HFR8A2 Arachis hypogaea HOM05D004962 ORTHO05D006249 7.4e-07 59.3 160 31.2
arahy.Tifrunner.gnm1.ann1.I79V4W Arachis hypogaea HOM05D004962 ORTHO05D006249 7.4e-07 59.3 159 30.8
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 8.2e-06 55.8 153 26.1


User provided reference genes

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