Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g20646 Beta vulgaris HOM05D005501 ORTHO05D007485 1.0e-102 376.7 188 100.0
EL10Ac2g02806 Beta vulgaris HOM05D005501 ORTHO05D014923 2.6e-93 345.5 195 90.8
EL10Ac1g00871 Beta vulgaris HOM05D005501 ORTHO05D007485 8.0e-47 191.0 132 75.0
AUR62004192 Chenopodium quinoa HOM05D005501 ORTHO05D007485 1.7e-41 173.3 132 68.2
Hund17031 Selenicereus undatus HOM05D005501 ORTHO05D007485 1.7e-41 173.3 130 66.2
Ah.05g176650 Amaranthus hybridus HOM05D005501 ORTHO05D007485 2.3e-41 172.9 132 66.7
Sed0021448 Sechium edule HOM05D005501 ORTHO05D007485 1.9e-40 169.9 132 65.2
Prupe.2G143300 Prunus persica HOM05D005501 ORTHO05D007485 4.3e-40 168.7 132 65.9
ClCG05G002370 Citrullus lanatus HOM05D005501 ORTHO05D007485 1.2e-39 167.2 144 61.1
Potri.014G067800 Populus trichocarpa HOM05D005501 ORTHO05D007485 1.2e-39 167.2 132 64.4
Sed0024444 Sechium edule HOM05D005501 ORTHO05D007485 1.2e-39 167.2 132 64.4
CAN.G295.11 Capsicum annuum HOM05D005501 ORTHO05D007485 1.6e-39 166.8 132 62.9
MELO3C006202.2 Cucumis melo HOM05D005501 ORTHO05D007485 1.6e-39 166.8 132 64.4
CsaV3_3G009810 Cucumis sativus L. HOM05D005501 ORTHO05D007485 1.6e-39 166.8 132 64.4
FAN01G2666 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.6e-39 166.8 132 65.2
MD02G1206900 Malus domestica HOM05D005501 ORTHO05D007485 1.6e-39 166.8 132 64.4
FAN03G0203 Fragaria x ananassa HOM05D005501 ORTHO05D007485 3.6e-39 165.6 132 64.4
RcHm_v2.0_Chr1g0349931 Rosa chinensis HOM05D005501 ORTHO05D007485 3.6e-39 165.6 132 64.4
CANSAT56G2357 Cannabis sativa HOM05D005501 ORTHO05D007485 4.7e-39 165.2 132 62.9
CiPaw.01G263800 Carya illinoinensis HOM05D005501 ORTHO05D007485 4.7e-39 165.2 132 65.2
Peaxi162Scf00959g00124 Petunia axillaris HOM05D005501 ORTHO05D007485 6.2e-39 164.9 132 61.4
Sc02g0002650 Simmondsia chinensis HOM05D005501 ORTHO05D007485 6.2e-39 164.9 132 62.1
Actinidia12246 Actinidia chinensis HOM05D005501 ORTHO05D007485 8.1e-39 164.5 132 62.1
Nitab4.5_0001329g0140 Nicotiana tabacum HOM05D005501 ORTHO05D007485 1.4e-38 163.7 132 60.6
QL08p052809 Quercus lobata HOM05D005501 ORTHO05D007485 1.4e-38 163.7 132 64.4
vmacro13416 Vaccinium macrocarpon HOM05D005501 ORTHO05D007485 1.4e-38 163.7 132 62.1
FvH4_7g11490 Fragaria vesca HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 63.6
FAN06G2192 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 63.6
FAN06G3216 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 63.6
FAN10G2689 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 63.6
FAN10G2758 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 63.6
Sopen05g029410 Solanum pennellii HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 61.4
PGSC0003DMG401007021 Solanum tuberosum HOM05D005501 ORTHO05D007485 1.8e-38 163.3 132 61.4
TWI14G0369 Tripterygium wilfordii HOM05D005501 ORTHO05D007485 2.3e-38 162.9 132 62.9
Nitab4.5_0003912g0080 Nicotiana tabacum HOM05D005501 ORTHO05D007485 3.1e-38 162.5 132 59.8
TAR374G1545 Trochodendron aralioides HOM05D005501 ORTHO05D007485 4.0e-38 162.2 132 61.4
TAR375G0004 Trochodendron aralioides HOM05D005501 ORTHO05D007485 5.2e-38 161.8 132 60.6
CSS0010588 Camellia sinensis var. sinensis HOM05D005501 ORTHO05D007485 6.8e-38 161.4 132 60.6
GSVIVG01027664001 Vitis vinifera HOM05D005501 ORTHO05D007485 6.8e-38 161.4 132 61.4
Lj7C531T10 Lonicera japonica HOM05D005501 ORTHO05D007485 8.9e-38 161.0 132 62.1
ATR0757G194 Amborella trichopoda HOM05D005501 ORTHO05D007485 1.2e-37 160.6 132 59.8
arahy.Tifrunner.gnm1.ann1.J20DWG Arachis hypogaea HOM05D005501 ORTHO05D007485 1.2e-37 160.6 132 60.6
MBI04_g44162_MAGBIO Magnolia biondii HOM05D005501 ORTHO05D007485 1.2e-37 160.6 132 61.4
CSS0024830 Camellia sinensis var. sinensis HOM05D005501 ORTHO05D007485 1.5e-37 160.2 132 59.8
Dinv43691 Davidia involucrata HOM05D005501 ORTHO05D007485 1.5e-37 160.2 132 62.1
Sabra14G0047700 Salix brachista HOM05D005501 ORTHO05D007485 1.5e-37 160.2 132 61.4
PGR042G1853 Punica granatum HOM05D005501 ORTHO05D007485 2.0e-37 159.8 132 60.6
MSTRG.20738 Avicennia marina HOM05D005501 ORTHO05D007485 2.6e-37 159.5 132 60.6
Ca_19945_v3 Cicer arietinum L. HOM05D005501 ORTHO05D007485 3.4e-37 159.1 132 60.6
Solyc05g050940.4 Solanum lycopersicum HOM05D005501 ORTHO05D007485 3.4e-37 159.1 132 59.8
Lj3g0016597 Lotus japonicus HOM05D005501 ORTHO05D007485 4.4e-37 158.7 132 60.6
Lalb_Chr07g0189951 Lupinus albus HOM05D005501 ORTHO05D007485 5.8e-37 158.3 132 60.6
Aa31LG1G26800 Aethionema arabicum HOM05D005501 ORTHO05D007485 7.5e-37 157.9 141 58.2
Eucgr.E01449 Eucalyptus grandis HOM05D005501 ORTHO05D007485 7.5e-37 157.9 132 61.4
HanXRQChr16g0519981 Helianthus annuus HOM05D005501 ORTHO05D007485 7.5e-37 157.9 132 59.8
Medtr4g024920 Medicago truncatula HOM05D005501 ORTHO05D007485 7.5e-37 157.9 134 60.4
Phvul.010G081700 Phaseolus vulgaris HOM05D005501 ORTHO05D007485 7.5e-37 157.9 132 60.6
Thecc.01G378900 Theobroma cacao HOM05D005501 ORTHO05D007485 7.5e-37 157.9 132 60.6
Atru.chr5.287 Acer truncatum HOM05D005501 ORTHO05D007485 9.9e-37 157.5 132 60.6
Manes.01G266900 Manihot esculenta HOM05D005501 ORTHO05D007485 9.9e-37 157.5 132 60.6
CARHR140480 Cardamine hirsuta HOM05D005501 ORTHO05D007485 1.7e-36 156.8 132 59.1
Cpa.g.sc18.102 Carica papaya HOM05D005501 ORTHO05D007485 2.2e-36 156.4 132 59.8
Gohir.A08G135800 Gossypium hirsutum HOM05D005501 ORTHO05D007485 2.2e-36 156.4 132 59.8
Gohir.D08G156600 Gossypium hirsutum HOM05D005501 ORTHO05D007485 2.2e-36 156.4 132 59.8
Gorai.004G162900 Gossypium raimondii HOM05D005501 ORTHO05D007485 2.2e-36 156.4 132 59.8
THA.LOC104817237 Tarenaya hassleriana HOM05D005501 ORTHO05D007485 2.2e-36 156.4 132 59.1
TPR.G7589 Trifolium pratense HOM05D005501 ORTHO05D007485 2.2e-36 156.4 132 59.8
Aqoxy7G00665 Aquilegia oxysepala HOM05D005501 ORTHO05D007485 2.9e-36 156.0 132 59.1
Migut.B01618 Erythranthe guttata HOM05D005501 ORTHO05D007485 2.9e-36 156.0 132 59.8
Thhalv10001427m.g Eutrema salsugineum HOM05D005501 ORTHO05D007485 2.9e-36 156.0 132 58.3
Ciclev10021173m.g Citrus clementina HOM05D005501 ORTHO05D007485 3.7e-36 155.6 132 59.1
Glyma.03G027900 Glycine max HOM05D005501 ORTHO05D007485 3.7e-36 155.6 132 59.8
COL.COLO4_12526 Corchorus olitorius HOM05D005501 ORTHO05D007485 4.9e-36 155.2 132 59.1
ECA234G2802 Erigeron canadensis HOM05D003566 ORTHO05D007485 4.9e-36 155.2 132 58.3
AL4G44370 Arabidopsis lyrata HOM05D005501 ORTHO05D007485 6.4e-36 154.8 132 58.3
AT2G45270 Arabidopsis thaliana HOM05D005501 ORTHO05D007485 6.4e-36 154.8 132 58.3
DCAR_002088 Daucus carota HOM05D005501 ORTHO05D007485 6.4e-36 154.8 132 59.8
Duzib133G0079 Durio zibethinus HOM05D005501 ORTHO05D007485 6.4e-36 154.8 132 59.1
Nn1g01133 Nelumbo nucifera HOM05D005501 ORTHO05D007485 6.4e-36 154.8 132 59.1
VMungo0331G1483 Vigna mungo HOM05D005501 ORTHO05D007485 6.4e-36 154.8 132 59.8
Cc02_g24090 Coffea canephora HOM05D005501 ORTHO05D007485 8.3e-36 154.5 132 58.3
Sp4g27290 Schrenkiella parvula HOM05D005501 ORTHO05D007485 8.3e-36 154.5 132 57.6
SpUn0031_0030 Schrenkiella parvula HOM05D005501 ORTHO05D007485 8.3e-36 154.5 132 57.6
BcaB02g08945 Brassica carinata HOM05D005501 ORTHO05D007485 1.4e-35 153.7 131 58.8
Carub.0004s2787 Capsella rubella HOM05D005501 ORTHO05D007485 1.4e-35 153.7 132 57.6
RcHm_v2.0_Chr1g0349801 Rosa chinensis HOM05D005501 ORTHO05D007485 1.4e-35 153.7 126 62.7
HPP92_000383 Vanilla planifolia HOM05D005501 ORTHO05D007485 1.4e-35 153.7 132 58.3
BcaC02g12231 Brassica carinata HOM05D005501 ORTHO05D007485 2.4e-35 152.9 132 57.6
C04p06180 Brassica napus HOM05D005501 ORTHO05D007485 2.4e-35 152.9 132 57.6
unitig_37.g12896 Utricularia gibba HOM05D005501 ORTHO05D007485 2.4e-35 152.9 134 59.7
BcaB02g08946 Brassica carinata HOM05D005501 ORTHO05D007485 4.1e-35 152.1 132 57.6
PSO478G3019 Papaver somniferum HOM05D005501 ORTHO05D007485 5.4e-35 151.8 131 56.5
BraA05t19495Z Brassica rapa HOM05D005501 ORTHO05D007485 7.1e-35 151.4 132 56.8
A05p05250 Brassica napus HOM05D005501 ORTHO05D007485 9.2e-35 151.0 132 56.8
BolC4t22243H Brassica oleracea HOM05D005501 ORTHO05D007485 9.2e-35 151.0 132 56.8
Lsat_1_v5_gn_4_43120 Lactuca sativa HOM05D005501 ORTHO05D007485 1.6e-34 150.2 132 58.3
Zm00001eb129920 Zea mays HOM05D005501 ORTHO05D007485 1.6e-34 150.2 132 54.5
Oeu055503.2 Olea europaea HOM05D005501 ORTHO05D007485 2.7e-34 149.4 148 54.1
PSO782G1940 Papaver somniferum HOM05D005501 ORTHO05D007485 2.7e-34 149.4 131 55.7
CDE11G1124 Ceratophyllum demersum HOM05D005501 ORTHO05D007485 7.8e-34 147.9 151 51.7
arahy.Tifrunner.gnm1.ann1.M89JWR Arachis hypogaea HOM05D005501 ORTHO05D007485 1.7e-33 146.7 157 50.3
C04p08020 Brassica napus HOM05D005501 ORTHO05D007485 5.1e-33 145.2 131 56.5
Psat0s3070g0040 Pisum sativum HOM05D005501 ORTHO05D007485 8.6e-33 144.4 129 56.6
AUR62013652 Chenopodium quinoa HOM05D005501 ORTHO05D007485 1.9e-32 143.3 113 69.9
AUR62025959 Chenopodium quinoa HOM05D005501 ORTHO05D007485 4.3e-32 142.1 129 62.8
RcHm_v2.0_Chr1g0349851 Rosa chinensis HOM05D005501 ORTHO05D007485 4.7e-31 138.7 112 63.4
SMO271G0013 Selaginella moellendorffii HOM05D005501 ORTHO05D007485 5.2e-30 135.2 130 50.8
Haze_16794 Corylus avellana HOM05D005501 ORTHO05D007485 2.0e-29 133.3 130 56.9
SalBow5G4090 Salvia bowleyana HOM05D005501 ORTHO05D007485 4.9e-28 128.6 113 60.2
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 6.4e-28 128.3 131 49.6
Mapoly0019s0039 Marchantia polymorpha HOM05D005501 ORTHO05D007485 1.1e-27 127.5 134 48.5
AagrBONN_evm.TU.Sc2ySwM_117.1161 Anthoceros agrestis HOM05D005501 ORTHO05D007485 4.1e-27 125.6 132 47.7
Pp3c15_10750 Physcomitrium patens HOM05D005501 ORTHO05D007485 5.4e-27 125.2 132 48.5
SGA_v2.0_scaffold95G28910 Striga asiatica HOM05D005501 ORTHO05D007485 1.3e-25 120.6 111 56.8
MCO07G252 Micromonas commoda HOM05D005501 ORTHO05D007485 1.5e-21 107.1 133 42.9
TAR374G0513 Trochodendron aralioides HOM05D005501 ORTHO05D007485 4.9e-20 102.1 61 73.8
SEGI_07028 Sequoiadendron giganteum HOM05D005501 ORTHO05D007485 3.2e-19 99.4 99 51.5
PRCOL_00001708 Prasinoderma coloniale HOM05D005501 ORTHO05D007485 1.6e-18 97.1 155 38.1
Glyma.01G140002 Glycine max HOM05D005501 ORTHO05D007485 4.6e-18 95.5 96 53.1
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.9e-16 90.1 61 67.2
Haze_26798 Corylus avellana HOM05D005501 ORTHO05D008444 1.7e-12 77.0 130 33.8
Dinv32366 Davidia involucrata HOM05D005501 ORTHO05D007485 1.1e-11 74.3 40 82.5
Cre14.g615500 Chlamydomonas reinhardtii HOM05D005501 ORTHO05D007485 9.3e-11 71.2 94 41.5
Cre15.g639400 Chlamydomonas reinhardtii HOM05D005501 ORTHO05D007485 1.2e-10 70.9 140 32.1


User provided reference genes

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