Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 0.0e+00 1591.2 784 100.0
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 0.0e+00 1161.4 767 75.7
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 0.0e+00 1152.9 786 74.0
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 0.0e+00 1097.4 792 71.5
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 2.4e-310 1068.5 841 66.6
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 1.3e-300 1036.2 780 66.3
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.4e-294 1016.1 780 65.8
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 1.0e-292 1010.0 780 65.1
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 3.2e-291 1005.0 776 64.8
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 3.2e-291 1005.0 777 64.7
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.7e-290 1001.9 775 64.9
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 4.4e-288 994.6 784 62.6
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 5.7e-288 994.2 783 64.2
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.8e-286 989.2 780 64.0
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 4.1e-286 988.0 788 63.6
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 4.1e-286 988.0 784 62.9
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 5.3e-286 987.6 778 64.5
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 7.0e-286 987.3 784 63.1
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 2.9e-284 981.9 781 63.6
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 5.0e-284 981.1 784 62.9
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 6.5e-284 980.7 784 62.9
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 6.5e-284 980.7 784 63.3
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 8.5e-284 980.3 780 63.3
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 1.1e-283 979.9 784 63.1
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 1.5e-283 979.5 779 63.3
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 4.2e-283 978.0 778 64.1
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 7.2e-283 977.2 784 63.3
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 1.6e-282 976.1 786 62.7
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.6e-282 976.1 782 63.3
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 2.1e-282 975.7 787 62.6
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.0e-281 971.8 778 64.3
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.0e-281 971.5 772 63.6
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 1.2e-280 969.9 779 62.8
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.5e-280 969.5 787 62.9
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 2.6e-280 968.8 785 62.0
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 3.3e-280 968.4 784 62.0
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 5.7e-280 967.6 778 64.0
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 9.7e-280 966.8 789 63.6
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 1.7e-279 966.1 787 63.3
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 2.2e-279 965.7 781 62.4
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.2e-279 965.7 787 63.2
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 2.2e-279 965.7 778 63.2
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 3.7e-279 964.9 782 62.0
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 3.7e-279 964.9 787 62.0
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 5.9e-277 957.6 782 62.1
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 1.0e-276 956.8 769 63.2
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.0e-276 954.5 789 62.6
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 8.5e-276 953.7 793 62.4
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.5e-275 953.0 776 63.1
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 7.2e-275 950.7 796 60.7
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.2e-274 949.9 780 62.6
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 2.1e-274 949.1 778 62.0
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 2.1e-274 949.1 787 60.7
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 2.7e-274 948.7 669 69.1
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 4.7e-274 948.0 793 62.3
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 6.1e-274 947.6 779 61.2
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 1.4e-273 946.4 786 62.2
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 1.8e-273 946.0 779 61.4
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 1.8e-273 946.0 777 62.3
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 1.2e-272 943.3 778 61.3
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 5.7e-272 941.0 776 60.7
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 7.5e-272 940.6 785 60.5
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 2.2e-271 939.1 777 61.8
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.4e-270 936.4 778 61.8
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 3.1e-270 935.3 779 61.6
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 3.1e-270 935.3 775 62.3
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 5.9e-269 931.0 667 68.5
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 1.0e-268 930.2 774 61.5
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 1.3e-268 929.9 807 59.1
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 1.7e-268 929.5 774 61.6
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 8.6e-268 927.2 782 60.4
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 2.5e-267 925.6 774 61.4
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 2.5e-267 925.6 811 58.7
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 1.2e-266 923.3 788 60.3
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 1.6e-266 922.9 777 60.0
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 2.1e-266 922.5 768 60.3
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 8.0e-266 920.6 866 56.4
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 6.8e-265 917.5 788 59.9
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 8.9e-265 917.1 780 61.0
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 8.9e-265 917.1 775 61.0
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 8.9e-265 917.1 780 60.3
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 2.6e-264 915.6 766 60.2
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 5.7e-264 914.4 776 60.2
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 2.9e-260 902.1 774 59.4
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 3.8e-260 901.7 775 60.6
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.0e-260 901.4 808 59.0
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 1.9e-254 882.9 769 58.4
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.2e-250 870.2 782 56.9
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 2.2e-247 859.4 586 70.3
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 4.1e-246 855.1 665 65.1
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 1.3e-239 833.6 785 57.7
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 4.1e-238 828.6 742 56.5
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 4.0e-233 812.0 786 54.7
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 1.4e-230 803.5 786 53.7
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 2.4e-230 802.7 539 71.8
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 1.2e-229 800.4 628 63.9
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.1e-222 777.3 779 53.9
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 7.9e-213 744.6 528 69.5
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 2.9e-199 699.5 762 49.6
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 2.5e-198 696.4 658 54.3
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.2e-184 651.0 791 48.5
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 8.8e-180 634.8 885 42.9
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 3.5e-176 622.9 656 50.2
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.8e-170 602.4 442 65.6
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 2.7e-165 586.6 847 41.8
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 3.1e-153 546.6 645 45.3
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 1.3e-143 514.6 641 46.3
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 4.3e-142 509.6 572 48.3
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 3.9e-135 486.5 671 44.1
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 5.6e-134 482.6 459 54.2
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.4e-129 468.0 657 42.2
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 4.7e-117 426.4 652 37.4
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 1.4e-116 424.9 738 38.1
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 3.4e-115 420.2 334 65.9
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.3e-111 408.3 303 67.0
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 3.4e-107 393.7 357 57.7
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 5.0e-74 283.5 272 54.0
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 1.6e-64 251.9 192 68.8
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 4.1e-52 210.7 132 76.5
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.0e-51 208.4 275 42.9
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.4e-47 195.7 164 57.9
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 5.2e-39 167.2 112 71.4
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 3.1e-36 157.9 102 75.5
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 1.3e-34 152.5 194 47.4
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 2.5e-25 121.7 99 64.6
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 2.0e-22 112.1 179 38.0
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 1.7e-21 109.0 149 41.6
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 1.1e-20 106.3 61 80.3
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.2e-16 92.8 63 61.9
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 2.0e-14 85.5 59 66.1
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 5.8e-14 84.0 186 30.6
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 1.5e-09 69.3 62 54.8
SHI28556 Sapria himalayana HOM05D005873 ORTHO05D007582 1.8e-07 62.4 51 52.9
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 4.4e-06 57.8 72 47.2
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 5.8e-06 57.4 38 68.4
RcHm_v2.0_Chr2g0132441 Rosa chinensis HOM05D005873 ORTHO05D007582 5.8e-06 57.4 60 51.7


User provided reference genes

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