Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 6.8e-180 634.0 357 100.0
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 5.5e-89 332.0 298 58.1
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 2.3e-87 326.6 262 67.9
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 6.6e-82 308.5 337 53.4
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 1.0e-79 301.2 306 53.6
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 6.8e-79 298.5 310 55.5
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.2e-78 297.7 304 53.0
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 3.4e-78 296.2 299 58.9
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 5.7e-78 295.4 314 57.6
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 7.5e-78 295.0 316 52.2
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 9.8e-78 294.7 304 53.3
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 2.2e-77 293.5 307 53.7
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 2.9e-77 293.1 302 52.3
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 4.9e-77 292.4 295 54.9
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 3.2e-76 289.7 295 54.2
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 3.2e-76 289.7 306 52.6
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 3.2e-76 289.7 311 52.7
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 5.9e-75 285.4 316 50.3
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 3.9e-74 282.7 302 52.0
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 8.6e-74 281.6 225 61.3
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 8.6e-74 281.6 296 52.0
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 1.5e-73 280.8 305 56.4
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 4.3e-73 279.3 319 49.2
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 7.3e-73 278.5 301 52.2
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 9.5e-73 278.1 295 53.2
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 2.1e-72 276.9 301 51.8
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 6.2e-72 275.4 296 52.0
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 8.0e-72 275.0 314 51.6
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 1.8e-71 273.9 309 48.9
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 4.0e-71 272.7 311 48.9
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 8.9e-71 271.6 301 49.2
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 4.4e-70 269.2 225 59.6
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 5.8e-70 268.9 296 51.0
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 7.5e-70 268.5 316 49.7
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 1.3e-69 267.7 309 47.6
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 1.3e-69 267.7 299 54.5
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 2.2e-69 266.9 308 49.4
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 2.2e-69 266.9 298 51.0
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 4.1e-68 262.7 293 51.9
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.0e-67 260.4 301 50.2
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 2.7e-67 260.0 291 47.1
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 4.6e-67 259.2 228 63.2
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 1.7e-66 257.3 304 49.7
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 1.7e-66 257.3 298 48.7
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 5.0e-66 255.8 299 49.2
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 1.1e-65 254.6 292 48.3
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 2.5e-65 253.4 295 48.1
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 2.5e-65 253.4 311 45.3
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 9.5e-65 251.5 311 44.7
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 1.2e-64 251.1 292 47.6
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 1.6e-64 250.8 311 45.3
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 2.8e-64 250.0 241 53.5
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 2.8e-64 250.0 291 47.1
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 2.8e-64 250.0 291 46.7
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 2.8e-64 250.0 233 53.6
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 1.4e-63 247.7 244 53.7
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 4.0e-63 246.1 293 47.8
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 5.2e-63 245.7 226 57.1
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 6.8e-63 245.4 237 56.1
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 2.6e-62 243.4 265 53.2
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 7.5e-62 241.9 286 48.3
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 1.7e-61 240.7 281 51.6
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 3.7e-61 239.6 298 50.7
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 8.3e-61 238.4 298 51.7
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 3.2e-60 236.5 294 54.8
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 3.2e-60 236.5 283 48.4
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 7.1e-60 235.3 293 45.7
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 9.2e-60 235.0 225 56.4
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 9.2e-60 235.0 308 44.5
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 1.6e-59 234.2 279 47.0
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 7.8e-59 231.9 299 44.8
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 2.3e-58 230.3 290 46.9
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 8.6e-58 228.4 311 42.4
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 5.6e-57 225.7 214 54.2
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 1.6e-56 224.2 227 52.9
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 2.8e-56 223.4 248 48.8
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 3.6e-56 223.0 299 47.5
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 4.7e-56 222.6 204 56.4
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 4.7e-56 222.6 280 47.5
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.8e-55 220.7 223 52.0
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 3.1e-55 219.9 244 50.0
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 5.2e-55 219.2 296 50.0
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 5.2e-55 219.2 285 43.5
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 1.2e-54 218.0 285 43.5
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 7.6e-54 215.3 295 41.7
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 4.9e-53 212.6 318 40.3
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 8.4e-53 211.8 289 42.6
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 7.1e-52 208.8 310 41.3
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 2.1e-51 207.2 303 43.2
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 1.9e-49 200.7 294 39.5
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 5.6e-49 199.1 240 48.3
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 5.6e-49 199.1 227 47.1
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 5.6e-49 199.1 300 40.3
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 4.7e-48 196.1 248 46.8
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 1.4e-47 194.5 236 49.2
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 7.6e-46 188.7 232 47.4
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 2.2e-45 187.2 195 53.3
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 2.9e-45 186.8 248 45.2
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 9.3e-44 181.8 258 42.2
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 1.6e-43 181.0 192 52.6
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 1.9e-41 174.1 271 41.0
Sc15g0002680 Simmondsia chinensis HOM05D005876 ORTHO05D007326 9.0e-39 165.2 189 48.7
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 9.0e-39 165.2 137 59.1
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 1.2e-38 164.9 235 43.0
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 9.9e-38 161.8 301 35.9
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 3.2e-36 156.8 135 59.3
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 4.2e-36 156.4 276 37.7
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 4.2e-36 156.4 195 46.7
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 5.1e-34 149.4 193 46.1
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 2.1e-32 144.1 208 41.8
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 8.1e-32 142.1 285 33.3
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 3.4e-30 136.7 254 36.2
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 1.7e-29 134.4 289 34.3
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 2.4e-28 130.6 102 59.8
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 1.6e-27 127.9 105 56.2
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.1e-25 121.7 292 36.0
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 6.2e-24 115.9 240 33.8
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 4.5e-22 109.8 104 52.9
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 5.5e-20 102.8 65 72.3
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 5.5e-20 102.8 65 72.3
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 5.5e-20 102.8 112 50.0
Oeu029421.1 Olea europaea HOM05D005876 ORTHO05D007326 1.6e-19 101.3 86 59.3
TPR.G5312 Trifolium pratense HOM05D005876 ORTHO05D007326 1.8e-18 97.8 132 40.2
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 7.4e-17 92.4 249 30.9
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 2.2e-16 90.9 66 57.6
CBR_g48398 Chara braunii HOM05D005876 ORTHO05D007326 6.7e-10 69.3 139 31.7
Cfa025603 Carpinus fangiana HOM05D005876 ORTHO05D007326 3.7e-08 63.5 150 28.7


User provided reference genes

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