Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10960 Beta vulgaris HOM05D060078 ORTHO05D002326 6.4e-174 614.0 312 100.0
EL10Ac2g03551 Beta vulgaris HOM05D060078 ORTHO05D002326 1.6e-71 273.9 144 91.0
CARHR285760 Cardamine hirsuta HOM05D000537 ORTHO05D000415 4.8e-12 76.3 131 33.6
Sp6g21070 Schrenkiella parvula HOM05D000537 ORTHO05D000415 6.3e-12 75.9 113 32.7
Cpa.g.sc1.418 Carica papaya HOM05D000537 ORTHO05D000415 1.1e-11 75.1 153 29.4
Carub.0008s2006 Capsella rubella HOM05D000537 ORTHO05D000415 1.4e-11 74.7 105 37.1
PGR142G1711 Punica granatum HOM05D000537 ORTHO05D000415 4.1e-11 73.2 138 29.7
Thhalv10013147m.g Eutrema salsugineum HOM05D000537 ORTHO05D000415 5.3e-11 72.8 131 31.3
SHI22757 Sapria himalayana HOM05D000537 ORTHO05D000415 5.3e-11 72.8 109 33.9
Duzib114G0977 Durio zibethinus HOM05D000537 ORTHO05D000415 6.9e-11 72.4 129 29.5
Ciclev10030937m.g Citrus clementina HOM05D000537 ORTHO05D000415 9.0e-11 72.0 187 26.7
BcaB08g36262 Brassica carinata HOM05D000537 ORTHO05D000415 2.0e-10 70.9 119 30.3
Gohir.D06G172350 Gossypium hirsutum HOM05D000537 ORTHO05D000415 2.0e-10 70.9 129 28.7
Gorai.010G201300 Gossypium raimondii HOM05D000537 ORTHO05D000415 2.0e-10 70.9 129 28.7
Nitab4.5_0000272g0130 Nicotiana tabacum HOM05D000537 ORTHO05D000415 2.0e-10 70.9 149 30.9
SGA_v2.0_scaffold221G42664 Striga asiatica HOM05D000537 ORTHO05D000415 2.0e-10 70.9 109 33.9
Gohir.A06G167100 Gossypium hirsutum HOM05D000537 ORTHO05D000415 2.6e-10 70.5 109 32.1
AL3G24190 Arabidopsis lyrata HOM05D000537 ORTHO05D000415 3.4e-10 70.1 148 27.0
Gohir.D06G172500 Gossypium hirsutum HOM05D000537 ORTHO05D000415 3.4e-10 70.1 109 32.1
Gorai.010G201400 Gossypium raimondii HOM05D000537 ORTHO05D000415 3.4e-10 70.1 109 32.1
BcaB01g00790 Brassica carinata HOM05D000537 ORTHO05D000415 4.5e-10 69.7 234 25.2
Nitab4.5_0011032g0020 Nicotiana tabacum HOM05D000537 ORTHO05D000415 4.5e-10 69.7 149 30.9
Thecc.10G040300 Theobroma cacao HOM05D000537 ORTHO05D000415 4.5e-10 69.7 142 28.2
A10p16590 Brassica napus HOM05D000537 ORTHO05D000415 5.9e-10 69.3 120 30.8
BraA10t43743Z Brassica rapa HOM05D000537 ORTHO05D000415 5.9e-10 69.3 120 30.8
AL8G35840 Arabidopsis lyrata HOM05D000537 ORTHO05D000415 1.0e-09 68.6 101 34.7
Gohir.A05G349100 Gossypium hirsutum HOM05D000537 ORTHO05D000415 1.0e-09 68.6 109 30.3
AT4G01180 Arabidopsis thaliana HOM05D000537 ORTHO05D000415 1.3e-09 68.2 101 32.7
Gohir.A06G166800 Gossypium hirsutum HOM05D000537 ORTHO05D000415 1.3e-09 68.2 129 27.9
Nitab4.5_0000830g0010 Nicotiana tabacum HOM05D000537 ORTHO05D000415 2.2e-09 67.4 187 28.3
Nitab4.5_0001097g0010 Nicotiana tabacum HOM05D000537 ORTHO05D000415 2.2e-09 67.4 182 26.9
Psat2g185120 Pisum sativum HOM05D000537 ORTHO05D000415 2.2e-09 67.4 161 28.0
Sabra15G0062600 Salix brachista HOM05D000537 ORTHO05D000415 2.2e-09 67.4 124 31.5
BcaC04g19779 Brassica carinata HOM05D000537 ORTHO05D000415 2.9e-09 67.0 112 30.4
C09p51800 Brassica napus HOM05D000537 ORTHO05D000415 2.9e-09 67.0 112 30.4
BolC9t58041H Brassica oleracea HOM05D000537 ORTHO05D000415 2.9e-09 67.0 112 30.4
CSS0022930 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 2.9e-09 67.0 129 29.5
AT3G12550 Arabidopsis thaliana HOM05D000537 ORTHO05D000415 5.0e-09 66.2 113 27.4
Sabra08G0041400 Salix brachista HOM05D000537 ORTHO05D000415 5.0e-09 66.2 124 31.5
PGSC0003DMG400023431 Solanum tuberosum HOM05D000537 ORTHO05D000415 6.5e-09 65.9 203 28.1
PGR004G1373 Punica granatum HOM05D002310 ORTHO05D002326 8.5e-09 65.5 85 36.5
CARHR087050 Cardamine hirsuta HOM05D000537 ORTHO05D000415 1.1e-08 65.1 160 25.0
Gorai.012G071000 Gossypium raimondii HOM05D000537 ORTHO05D000415 1.4e-08 64.7 109 29.4
MD01G1135500 Malus domestica HOM05D000537 ORTHO05D000415 1.4e-08 64.7 154 27.3
Medtr5g079940 Medicago truncatula HOM05D000537 ORTHO05D000415 1.4e-08 64.7 124 29.8
Manes.07G117100 Manihot esculenta HOM05D000537 ORTHO05D000415 1.9e-08 64.3 178 25.8
PGR044G1583 Punica granatum HOM05D000537 ORTHO05D000415 1.9e-08 64.3 131 26.7
Solyc05g054420.4 Solanum lycopersicum HOM05D000537 ORTHO05D000415 1.9e-08 64.3 203 27.1
BcaB06g25532 Brassica carinata HOM05D000537 ORTHO05D000415 2.5e-08 63.9 156 25.6
CAN.G250.7 Capsicum annuum HOM05D000537 ORTHO05D000415 2.5e-08 63.9 139 29.5
Nitab4.5_0008565g0030 Nicotiana tabacum HOM05D000537 ORTHO05D000415 2.5e-08 63.9 171 27.5
Sopen05g032910 Solanum pennellii HOM05D000537 ORTHO05D000415 2.5e-08 63.9 203 27.1
SGA_v2.0_scaffold221G42672 Striga asiatica HOM05D000537 ORTHO05D000415 2.5e-08 63.9 169 27.2
COL.COLO4_32992 Corchorus olitorius HOM05D000537 ORTHO05D000415 3.2e-08 63.5 156 24.4
Carub.0003s1189 Capsella rubella HOM05D000537 ORTHO05D000415 4.2e-08 63.2 112 27.7
BcaC05g29258 Brassica carinata HOM05D000537 ORTHO05D000415 7.2e-08 62.4 166 25.3
ECA238G2608 Erigeron canadensis HOM05D000537 ORTHO05D000415 7.2e-08 62.4 161 30.4
C05p55370 Brassica napus HOM05D000537 ORTHO05D000415 1.6e-07 61.2 146 26.0
BolC5t34203H Brassica oleracea HOM05D000537 ORTHO05D000415 1.6e-07 61.2 146 26.0
Lj6g0001534 Lotus japonicus HOM05D000537 ORTHO05D000415 1.6e-07 61.2 177 26.6
Atru.chr5.316 Acer truncatum HOM05D000537 ORTHO05D000415 2.1e-07 60.8 105 31.4
Aqoxy2G03391 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 3.6e-07 60.1 85 34.1
TPR.G3474 Trifolium pratense HOM05D000537 ORTHO05D000415 3.6e-07 60.1 149 25.5
vmacro03066 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.6e-07 60.1 135 28.1
Sp3g10690 Schrenkiella parvula HOM05D000537 ORTHO05D000415 4.6e-07 59.7 140 25.0
Thhalv10020282m.g Eutrema salsugineum HOM05D000537 ORTHO05D000415 7.9e-07 58.9 113 26.5
Medtr2g097020 Medicago truncatula HOM05D000537 ORTHO05D000415 7.9e-07 58.9 243 24.7
Atru.chr11.1941 Acer truncatum HOM05D000537 ORTHO05D000415 1.0e-06 58.5 106 31.1
CSS0045683 Camellia sinensis var. sinensis HOM05D000537 ORTHO05D000415 1.0e-06 58.5 194 25.8
CAN.G1013.30 Capsicum annuum HOM05D000537 ORTHO05D000415 1.0e-06 58.5 157 26.8
Peaxi162Scf00886g00015 Petunia axillaris HOM05D000537 ORTHO05D000415 1.0e-06 58.5 180 25.6
Actinidia07738 Actinidia chinensis HOM05D000537 ORTHO05D000415 8.7e-06 55.5 130 31.5
Lj3g0006322 Lotus japonicus HOM05D000537 ORTHO05D000415 8.7e-06 55.5 173 26.0


User provided reference genes

Program Settings