Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 4.0e-190 667.9 336 100.0
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 2.1e-138 496.1 333 76.9
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 3.6e-138 495.4 342 75.7
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 7.9e-138 494.2 319 78.4
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.4e-137 493.4 348 73.9
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 1.8e-137 493.0 310 80.6
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 1.8e-137 493.0 324 78.4
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 2.3e-137 492.7 340 74.4
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 3.0e-137 492.3 351 72.6
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.5e-136 490.0 330 75.8
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 1.5e-136 490.0 316 79.4
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 3.3e-136 488.8 325 77.2
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 5.7e-136 488.0 329 75.4
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 7.4e-136 487.6 311 79.1
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 9.7e-136 487.3 310 81.0
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 9.7e-136 487.3 310 81.0
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 1.7e-135 486.5 299 80.3
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 4.8e-135 485.0 310 78.4
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 6.3e-135 484.6 316 79.4
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 6.3e-135 484.6 310 80.6
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 8.2e-135 484.2 336 73.2
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.1e-134 483.8 310 78.1
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.1e-134 483.8 324 77.5
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.4e-134 482.6 315 76.8
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 2.4e-134 482.6 337 74.5
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 3.1e-134 482.3 307 77.9
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.1e-134 482.3 342 73.7
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 3.1e-134 482.3 324 77.2
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 4.1e-134 481.9 342 74.9
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 4.1e-134 481.9 323 75.2
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.2e-133 480.3 321 75.7
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 2.0e-133 479.6 334 73.7
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 2.0e-133 479.6 312 79.2
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 3.5e-133 478.8 310 77.7
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 3.5e-133 478.8 324 75.9
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 3.5e-133 478.8 310 77.4
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 4.5e-133 478.4 315 76.8
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 4.5e-133 478.4 313 77.0
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.9e-133 478.0 324 76.5
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.0e-132 477.2 316 77.5
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.3e-132 476.9 310 77.1
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.3e-132 476.9 313 77.6
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.7e-132 476.5 311 77.2
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 2.9e-132 475.7 322 75.5
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 3.8e-132 475.3 319 75.2
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 6.5e-132 474.6 315 76.5
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 8.5e-132 474.2 325 73.8
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 8.5e-132 474.2 326 74.5
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.1e-131 473.8 308 78.2
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.4e-131 473.4 329 73.6
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 1.4e-131 473.4 316 75.3
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 2.5e-131 472.6 310 77.1
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 5.5e-131 471.5 307 77.5
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 5.5e-131 471.5 333 73.3
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 7.2e-131 471.1 333 73.3
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 3.6e-130 468.8 337 72.1
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.4e-129 466.8 310 76.1
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 1.8e-129 466.5 305 77.0
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.0e-128 463.0 308 76.0
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 2.6e-128 462.6 337 71.2
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.7e-127 459.9 320 74.4
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.8e-127 459.1 317 74.1
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.8e-127 459.1 319 73.0
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 4.8e-127 458.4 345 71.6
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.8e-126 456.4 310 74.2
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 2.4e-126 456.1 345 70.4
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 7.0e-126 454.5 304 76.3
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.5e-125 451.8 377 65.3
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 7.7e-125 451.1 295 79.3
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.7e-122 442.6 324 72.2
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 8.0e-122 441.0 308 73.1
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.7e-120 434.1 310 73.5
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 3.7e-119 432.2 329 69.0
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 4.8e-119 431.8 310 73.2
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.2e-117 427.2 313 70.6
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 5.9e-117 424.9 357 64.1
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 7.7e-117 424.5 342 65.2
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 8.5e-116 421.0 302 71.2
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 5.5e-115 418.3 302 70.5
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.6e-114 416.8 299 72.9
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 3.0e-113 412.5 316 68.0
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.2e-112 410.6 275 75.6
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 9.8e-112 407.5 328 67.1
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 2.8e-111 406.0 497 49.5
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 6.6e-108 394.8 292 70.2
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 8.6e-108 394.4 244 78.3
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 3.3e-107 392.5 309 68.0
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.2e-106 390.6 295 70.5
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 6.8e-105 384.8 419 52.7
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.2e-104 384.0 308 65.3
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.0e-104 383.3 263 73.4
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 7.5e-104 381.3 305 65.6
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 3.7e-103 379.0 295 70.5
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 8.3e-103 377.9 322 60.6
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 1.2e-101 374.0 266 74.4
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 7.8e-101 371.3 284 70.1
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.9e-100 369.4 274 69.7
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 8.6e-100 367.9 300 62.3
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.5e-99 367.1 295 63.1
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 6.8e-97 358.2 243 75.7
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 6.4e-95 351.7 244 73.0
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 3.2e-94 349.4 219 79.0
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 1.1e-91 340.9 246 69.9
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 7.5e-88 328.2 260 63.8
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 5.4e-86 322.0 184 86.4
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.0e-80 303.5 215 73.5
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 2.6e-80 303.1 299 53.2
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 3.2e-78 296.2 227 67.0
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 3.9e-76 289.3 329 51.7
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 6.8e-73 278.5 177 76.3
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.5e-67 260.0 158 81.0
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.9e-62 243.8 301 45.8
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 4.2e-62 242.7 187 70.6
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.1e-57 226.5 482 34.0
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 4.0e-57 226.1 228 57.0
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 2.6e-56 223.4 176 65.9
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 8.4e-55 218.4 143 75.5
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.9e-51 207.2 157 68.8
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.4e-46 191.0 113 79.6
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.3e-44 184.5 120 77.5
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.4e-41 173.7 118 74.6
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.6e-37 161.0 265 35.1
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.3e-36 157.1 96 76.0
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 3.7e-26 123.2 305 28.5
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.1e-21 107.5 308 27.9
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.0e-20 105.1 52 98.1
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 8.8e-20 102.1 52 96.2
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.0e-19 100.9 67 76.1
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 3.7e-18 96.7 76 69.7
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 4.1e-17 93.2 57 80.7
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.6e-16 90.5 55 80.0
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 1.7e-15 87.8 66 66.7
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 5.0e-15 86.3 55 74.5
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 6.1e-13 79.3 60 65.0
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 5.2e-12 76.3 43 81.4
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 2.5e-06 57.4 90 35.6
C05p22080 Brassica napus HOM05D005536 ORTHO05D006999 4.2e-06 56.6 90 36.7
BolC5t30904H Brassica oleracea HOM05D005536 ORTHO05D006999 4.2e-06 56.6 90 36.7
BcaB07g32292 Brassica carinata HOM05D005536 ORTHO05D006999 5.5e-06 56.2 90 35.6
CARHR023320 Cardamine hirsuta HOM05D005536 ORTHO05D006999 5.5e-06 56.2 132 31.8
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 7.2e-06 55.8 90 36.7
Thhalv10007358m.g Eutrema salsugineum HOM05D005536 ORTHO05D006999 7.2e-06 55.8 98 32.7
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 7.2e-06 55.8 111 34.2
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 9.4e-06 55.5 90 35.6
A09p41800 Brassica napus HOM05D005536 ORTHO05D006999 9.4e-06 55.5 90 35.6
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 9.4e-06 55.5 102 34.3


User provided reference genes

Program Settings