Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04433 Beta vulgaris HOM05D004464 ORTHO05D005135 2.0e-98 362.5 183 100.0
Ah.16g101000 Amaranthus hybridus HOM05D004464 ORTHO05D005135 1.8e-91 339.3 183 91.3
AUR62023152 Chenopodium quinoa HOM05D004464 ORTHO05D005135 4.0e-91 338.2 183 91.8
AUR62009474 Chenopodium quinoa HOM05D004464 ORTHO05D005135 1.2e-90 336.7 183 91.3
Hund16239 Selenicereus undatus HOM05D004464 ORTHO05D005135 1.7e-89 332.8 183 89.1
Ah.10g038200 Amaranthus hybridus HOM05D004464 ORTHO05D005135 4.8e-89 331.3 183 89.6
Eucgr.J01412 Eucalyptus grandis HOM05D004464 ORTHO05D005135 4.2e-85 318.2 181 85.6
PGR042G1328 Punica granatum HOM05D004464 ORTHO05D005135 4.2e-85 318.2 183 84.7
Manes.01G100100 Manihot esculenta HOM05D004464 ORTHO05D005135 7.2e-85 317.4 183 83.6
Ciclev10012892m.g Citrus clementina HOM05D004464 ORTHO05D005135 6.1e-84 314.3 183 83.6
Glyma.10G232700 Glycine max HOM05D004464 ORTHO05D005135 6.1e-84 314.3 183 83.1
Glyma.20G161600 Glycine max HOM05D004464 ORTHO05D005135 6.1e-84 314.3 183 83.1
GSVIVG01036537001 Vitis vinifera HOM05D004464 ORTHO05D005135 6.1e-84 314.3 183 84.2
Atru.chr12.814 Acer truncatum HOM05D004464 ORTHO05D005135 1.4e-83 313.2 183 82.5
Actinidia26272 Actinidia chinensis HOM05D004464 ORTHO05D005135 1.8e-83 312.8 183 82.5
TAR371G0146 Trochodendron aralioides HOM05D004464 ORTHO05D005135 2.3e-83 312.4 183 82.5
CDE10G0456 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 3.0e-83 312.0 183 82.5
Nn4g23543 Nelumbo nucifera HOM05D004464 ORTHO05D005135 3.0e-83 312.0 183 84.2
Dinv33871 Davidia involucrata HOM05D004464 ORTHO05D005135 4.0e-83 311.6 183 83.6
Sc07g0002150 Simmondsia chinensis HOM05D004464 ORTHO05D005135 4.0e-83 311.6 182 82.4
Duzib150G0689 Durio zibethinus HOM05D004464 ORTHO05D005135 5.2e-83 311.2 183 83.1
Phvul.007G072900 Phaseolus vulgaris HOM05D004464 ORTHO05D005135 5.2e-83 311.2 183 82.5
Actinidia17608 Actinidia chinensis HOM05D004464 ORTHO05D005135 6.8e-83 310.8 183 82.0
Gohir.D05G003500 Gossypium hirsutum HOM05D004464 ORTHO05D005135 6.8e-83 310.8 183 82.0
Gorai.009G003100 Gossypium raimondii HOM05D004464 ORTHO05D005135 6.8e-83 310.8 183 82.0
Prupe.3G248300 Prunus persica HOM05D004464 ORTHO05D005135 1.2e-82 310.1 183 82.0
Gohir.A05G003100 Gossypium hirsutum HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.0
HanXRQChr15g0490131 Helianthus annuus HOM05D004464 ORTHO05D005135 1.5e-82 309.7 181 81.8
Lj3g0020854 Lotus japonicus HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.5
Lj4g0017621 Lotus japonicus HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.5
Dinv34904 Davidia involucrata HOM05D004464 ORTHO05D005135 2.0e-82 309.3 183 83.6
Sabra17G0087000 Salix brachista HOM05D004464 ORTHO05D005135 2.0e-82 309.3 183 80.9
Migut.K00882 Erythranthe guttata HOM05D004464 ORTHO05D005135 2.6e-82 308.9 181 83.4
SGA_v2.0_scaffold148G36455 Striga asiatica HOM05D004464 ORTHO05D005135 2.6e-82 308.9 183 82.5
Hma1.2p1_1837F.1_g304810 Hydrangea macrophylla HOM05D004464 ORTHO05D005135 3.4e-82 308.5 183 83.6
MD09G1075700 Malus domestica HOM05D004464 ORTHO05D005135 3.4e-82 308.5 183 81.4
Potri.017G101200 Populus trichocarpa HOM05D004464 ORTHO05D005135 3.4e-82 308.5 183 81.4
MD17G1066400 Malus domestica HOM05D004464 ORTHO05D005135 5.7e-82 307.8 183 81.4
COL.COLO4_21291 Corchorus olitorius HOM05D004464 ORTHO05D005135 7.5e-82 307.4 183 82.0
Thecc.01G298100 Theobroma cacao HOM05D004464 ORTHO05D005135 9.8e-82 307.0 183 81.4
MSTRG.15432 Avicennia marina HOM05D004464 ORTHO05D005135 1.7e-81 306.2 183 82.5
CDE10G0562 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 1.7e-81 306.2 183 82.5
MBI15_g04989_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 2.2e-81 305.8 183 80.9
MBI15_g11301_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 2.2e-81 305.8 183 80.9
Potri.004G113600 Populus trichocarpa HOM05D004464 ORTHO05D005135 2.2e-81 305.8 183 80.3
PGSC0003DMG400001469 Solanum tuberosum HOM05D004464 ORTHO05D005135 2.2e-81 305.8 183 81.4
Sopen02g034060 Solanum pennellii HOM05D004464 ORTHO05D005135 2.8e-81 305.4 183 81.4
Nitab4.5_0001339g0030 Nicotiana tabacum HOM05D004464 ORTHO05D005135 3.7e-81 305.1 183 81.4
SalBow1G0807 Salvia bowleyana HOM05D004464 ORTHO05D005135 3.7e-81 305.1 183 80.9
Peaxi162Scf01039g00131 Petunia axillaris HOM05D004464 ORTHO05D005135 4.9e-81 304.7 183 82.0
arahy.Tifrunner.gnm1.ann1.6V5APJ Arachis hypogaea HOM05D004464 ORTHO05D005135 6.3e-81 304.3 183 79.2
arahy.Tifrunner.gnm1.ann1.AQQ1ZC Arachis hypogaea HOM05D004464 ORTHO05D005135 6.3e-81 304.3 183 79.2
TWI36G0525 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.3e-81 304.3 183 78.7
TWI36G0787 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.3e-81 304.3 183 78.7
Solyc02g089280.3 Solanum lycopersicum HOM05D004464 ORTHO05D005135 8.3e-81 303.9 183 80.9
TWI75G1858 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 1.1e-80 303.5 183 78.7
VMungo0720G0545 Vigna mungo HOM05D004464 ORTHO05D005135 1.1e-80 303.5 183 81.4
Psat7g017000 Pisum sativum HOM05D004464 ORTHO05D005135 1.4e-80 303.1 183 80.3
TPR.G29907 Trifolium pratense HOM05D004464 ORTHO05D005135 1.4e-80 303.1 183 78.1
ClCG07G016070 Citrullus lanatus HOM05D004464 ORTHO05D005135 2.4e-80 302.4 179 81.0
Sabra10G0012000 Salix brachista HOM05D004464 ORTHO05D005135 2.4e-80 302.4 190 77.9
Medtr8g102530 Medicago truncatula HOM05D004464 ORTHO05D005135 3.1e-80 302.0 183 78.1
CSS0016516 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 7.0e-80 300.8 183 79.2
CSS0037173 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 9.2e-80 300.4 183 78.7
CANSAT11G0238 Cannabis sativa HOM05D004464 ORTHO05D005135 1.6e-79 299.7 183 78.7
CAN.G497.54 Capsicum annuum HOM05D004464 ORTHO05D005135 1.6e-79 299.7 183 81.4
TPR.G23462 Trifolium pratense HOM05D004464 ORTHO05D005135 1.6e-79 299.7 183 77.6
FvH4_6g46310 Fragaria vesca HOM05D004464 ORTHO05D005135 2.0e-79 299.3 183 78.7
FAN02G0274 Fragaria x ananassa HOM05D004464 ORTHO05D005135 2.0e-79 299.3 183 78.7
FAN14G2017 Fragaria x ananassa HOM05D004464 ORTHO05D005135 2.0e-79 299.3 183 78.7
Cc07_g04530 Coffea canephora HOM05D004464 ORTHO05D005135 2.7e-79 298.9 183 79.8
RcHm_v2.0_Chr2g0164761 Rosa chinensis HOM05D004464 ORTHO05D005135 2.7e-79 298.9 183 78.7
CANSAT64G2552 Cannabis sativa HOM05D004464 ORTHO05D005135 3.5e-79 298.5 183 78.7
CsaV3_4G010040 Cucumis sativus L. HOM05D004464 ORTHO05D005135 4.5e-79 298.1 179 79.3
FAN05G3637 Fragaria x ananassa HOM05D004464 ORTHO05D005135 4.5e-79 298.1 183 78.7
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.0e-78 297.0 183 79.8
Lalb_Chr16g0389591 Lupinus albus HOM05D004464 ORTHO05D005135 1.3e-78 296.6 183 78.7
FAN09G0031 Fragaria x ananassa HOM05D004464 ORTHO05D005135 1.7e-78 296.2 183 78.1
Aa31LG11G13830 Aethionema arabicum HOM05D004464 ORTHO05D005135 3.8e-78 295.0 181 77.3
THA.LOC104820981 Tarenaya hassleriana HOM05D004464 ORTHO05D005135 3.8e-78 295.0 181 79.6
DCAR_016093 Daucus carota HOM05D004464 ORTHO05D005135 5.0e-78 294.7 183 77.6
Aa31LG2G910 Aethionema arabicum HOM05D004464 ORTHO05D005135 6.6e-78 294.3 181 76.8
ATR0743G033 Amborella trichopoda HOM05D004464 ORTHO05D005135 6.6e-78 294.3 183 77.0
CARHR197580 Cardamine hirsuta HOM05D004464 ORTHO05D005135 8.6e-78 293.9 181 76.8
AL6G26590 Arabidopsis lyrata HOM05D004464 ORTHO05D005135 1.1e-77 293.5 181 77.9
Sp6g28370 Schrenkiella parvula HOM05D004464 ORTHO05D005135 1.1e-77 293.5 181 76.8
Sed0009719 Sechium edule HOM05D004464 ORTHO05D005135 1.1e-77 293.5 181 76.8
BcaB01g05028 Brassica carinata HOM05D004464 ORTHO05D005135 1.5e-77 293.1 181 76.8
BraA03t10058Z Brassica rapa HOM05D004464 ORTHO05D005135 1.5e-77 293.1 181 76.2
BcaNung02202 Brassica carinata HOM05D004464 ORTHO05D005135 1.9e-77 292.7 181 76.2
C03p08530 Brassica napus HOM05D004464 ORTHO05D005135 1.9e-77 292.7 181 76.2
unitig_0.g1789 Utricularia gibba HOM05D004464 ORTHO05D005135 2.5e-77 292.4 181 79.0
AT5G15750 Arabidopsis thaliana HOM05D004464 ORTHO05D005135 3.3e-77 292.0 181 76.2
A03p07340 Brassica napus HOM05D004464 ORTHO05D005135 3.3e-77 292.0 181 76.2
BcaC03g18447 Brassica carinata HOM05D004464 ORTHO05D005135 7.3e-77 290.8 181 76.8
C02p07950 Brassica napus HOM05D004464 ORTHO05D005135 7.3e-77 290.8 181 76.8
BolC2t06718H Brassica oleracea HOM05D004464 ORTHO05D005135 7.3e-77 290.8 181 76.8
A02p03200 Brassica napus HOM05D004464 ORTHO05D005135 1.2e-76 290.0 181 76.8
BraA02t05291Z Brassica rapa HOM05D004464 ORTHO05D005135 1.2e-76 290.0 181 76.8
Carub.0004s0609 Capsella rubella HOM05D004464 ORTHO05D005135 2.8e-76 288.9 181 76.2
QL09p044371 Quercus lobata HOM05D004464 ORTHO05D005135 4.7e-76 288.1 184 76.6
CiPaw.15G080600 Carya illinoinensis HOM05D004464 ORTHO05D005135 6.1e-76 287.7 184 75.5
Aqoxy3G02935 Aquilegia oxysepala HOM05D004464 ORTHO05D005135 1.4e-75 286.6 183 76.0
CiPaw.06G059900 Carya illinoinensis HOM05D004464 ORTHO05D005135 4.0e-75 285.0 184 75.5
Cfa007699 Carpinus fangiana HOM05D004464 ORTHO05D005135 5.2e-75 284.6 184 76.6
Carub.0006s1390 Capsella rubella HOM05D004464 ORTHO05D005135 1.2e-74 283.5 181 75.1
vmacro18124 Vaccinium macrocarpon HOM05D004464 ORTHO05D005135 4.4e-74 281.6 182 76.4
PSO782G4050 Papaver somniferum HOM05D004464 ORTHO05D005135 5.8e-74 281.2 183 75.4
PSO198G0095 Papaver somniferum HOM05D004464 ORTHO05D005135 2.9e-73 278.9 183 74.9
QL02p065152 Quercus lobata HOM05D004464 ORTHO05D005135 3.2e-72 275.4 184 71.7
MCO12G368 Micromonas commoda HOM05D004464 ORTHO05D005135 4.1e-72 275.0 181 72.9
SMO089G0012 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 7.0e-72 274.2 183 70.5
PSO017G3712 Papaver somniferum HOM05D004464 ORTHO05D005135 9.2e-72 273.9 183 72.7
Oeu033412.2 Olea europaea HOM05D004464 ORTHO05D005135 3.5e-71 271.9 228 61.4
ECA285G0012 Erigeron canadensis HOM05D004464 ORTHO05D005135 4.6e-71 271.6 185 71.9
Mapoly0007s0196 Marchantia polymorpha HOM05D004464 ORTHO05D005135 1.0e-70 270.4 183 67.8
Pp3c13_7750 Physcomitrium patens HOM05D004464 ORTHO05D005135 6.6e-70 267.7 183 67.8
DCAR_010215 Daucus carota HOM05D004464 ORTHO05D005135 1.2e-68 263.5 219 63.0
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 3.6e-68 261.9 155 78.7
Atru.chr5.3325 Acer truncatum HOM05D004464 ORTHO05D005135 3.1e-67 258.8 183 73.2
Nitab4.5_0009887g0020 Nicotiana tabacum HOM05D004464 ORTHO05D005135 2.6e-66 255.8 152 81.6
SHI12226 Sapria himalayana HOM05D004464 ORTHO05D005135 5.8e-66 254.6 184 64.7
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 5.8e-66 254.6 155 79.4
Duzib170G0747 Durio zibethinus HOM05D004464 ORTHO05D005135 1.3e-65 253.4 183 71.0
Cre03.g170750 Chlamydomonas reinhardtii HOM05D004464 ORTHO05D005135 4.1e-64 248.4 181 63.5
Glyma.16G058000 Glycine max HOM05D004464 ORTHO05D005135 3.5e-63 245.4 152 78.9
Zm00001eb280020 Zea mays HOM05D004464 ORTHO05D005135 8.6e-62 240.7 181 66.9
Haze_14377 Corylus avellana HOM05D004464 ORTHO05D005135 9.5e-61 237.3 188 67.6
Thhalv10014794m.g Eutrema salsugineum HOM05D004464 ORTHO05D005135 4.0e-59 231.9 138 79.0
Lsat_1_v5_gn_3_96881 Lactuca sativa HOM05D004464 ORTHO05D005135 7.5e-58 227.6 181 64.1
PSO478G4867 Papaver somniferum HOM05D004464 ORTHO05D005135 3.2e-56 222.2 183 63.4
SEGI_12415 Sequoiadendron giganteum HOM05D004464 ORTHO05D005135 3.9e-54 215.3 138 73.9
Nn3g17540 Nelumbo nucifera HOM05D004464 ORTHO05D005135 9.5e-53 210.7 183 61.2
SMO302G0020 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 9.5e-53 210.7 175 61.1
HPP92_025702 Vanilla planifolia HOM05D004464 ORTHO05D005135 8.1e-52 207.6 150 69.3
BcaNung00660 Brassica carinata HOM05D004464 ORTHO05D005135 3.2e-48 195.7 158 60.1
Gorai.007G357000 Gossypium raimondii HOM05D004464 ORTHO05D005135 4.6e-47 191.8 179 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1773 Anthoceros agrestis HOM05D004464 ORTHO05D005135 7.8e-47 191.0 152 59.9
Cfa025099 Carpinus fangiana HOM05D002539 ORTHO05D005135 8.7e-46 187.6 186 50.0
CBR_g26031 Chara braunii HOM05D004464 ORTHO05D005135 2.6e-42 176.0 132 64.4
MELO3C000036.2 Cucumis melo HOM05D004464 ORTHO05D005135 3.4e-42 175.6 146 60.3
BcaNung00661 Brassica carinata HOM05D004464 ORTHO05D005135 2.2e-41 172.9 158 55.7
Cpa.g.sc14.239 Carica papaya HOM05D004464 ORTHO05D005135 4.9e-41 171.8 102 81.4
Rhsim08G0077600 Rhododendron simsii HOM05D004464 ORTHO05D005135 4.2e-40 168.7 102 78.4
BolC3t13358H Brassica oleracea HOM05D004464 ORTHO05D005135 9.3e-40 167.5 106 73.6
Lju361C7T5 Lonicera japonica HOM05D004464 ORTHO05D005135 1.7e-38 163.3 100 75.0
Gorai.007G357200 Gossypium raimondii HOM05D004464 ORTHO05D005135 3.3e-37 159.1 99 75.8
Gorai.007G356600 Gossypium raimondii HOM05D004464 ORTHO05D005135 5.6e-37 158.3 100 76.0
AagrBONN_evm.TU.Sc2ySwM_344.90 Anthoceros agrestis HOM05D004464 ORTHO05D005135 2.8e-36 156.0 134 59.7
BolC1t00394H Brassica oleracea HOM05D004464 ORTHO05D005135 1.4e-32 143.7 99 66.7
ECA246G0747 Erigeron canadensis HOM05D004464 ORTHO05D005135 7.1e-32 141.4 105 64.8
Lju361A7T16 Lonicera japonica HOM05D004464 ORTHO05D005135 9.3e-32 141.0 81 82.7
MELO3C001556.2 Cucumis melo HOM05D004464 ORTHO05D005135 2.1e-28 129.8 81 75.3
Oeu003765.1 Olea europaea HOM05D007961 ORTHO05D005135 2.9e-25 119.4 78 73.1
AagrBONN_evm.TU.Sc2ySwM_368.3154 Anthoceros agrestis HOM05D004464 ORTHO05D005135 4.9e-25 118.6 101 57.4
SHI12394 Sapria himalayana HOM05D004464 ORTHO05D005135 7.1e-24 114.8 106 55.7
SHI40216 Sapria himalayana HOM05D004464 ORTHO05D005135 2.9e-17 92.8 73 57.5
Thecc.01G298200 Theobroma cacao HOM05D004464 ORTHO05D005135 5.5e-16 88.6 102 49.0
C09p61360 Brassica napus HOM05D004464 ORTHO05D005135 2.1e-15 86.7 187 36.4
MELO3C000032.2 Cucumis melo HOM05D004464 ORTHO05D005135 3.5e-15 85.9 52 80.8
Os04g0662100 Oryza sativa ssp. japonica HOM05D004464 ORTHO05D005135 5.0e-09 65.5 37 78.4
BolC9t58977H Brassica oleracea HOM05D004464 ORTHO05D005135 1.9e-08 63.5 81 45.7
BcaC04g18941 Brassica carinata HOM05D004464 ORTHO05D005135 3.2e-08 62.8 181 30.9


User provided reference genes

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