Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 3.8e-149 531.9 373 100.0
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 4.9e-112 408.7 373 74.5
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 5.8e-105 385.2 373 79.4
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 2.2e-104 383.3 373 76.7
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 8.6e-101 371.3 375 77.1
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 1.6e-99 367.1 375 73.9
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 8.1e-99 364.8 374 77.5
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 1.8e-98 363.6 374 78.1
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 3.1e-98 362.8 359 77.7
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 6.8e-98 361.7 373 76.4
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 8.9e-98 361.3 374 77.3
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 3.4e-97 359.4 362 77.9
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 5.8e-97 358.6 375 76.0
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 7.5e-97 358.2 378 74.3
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 7.5e-97 358.2 375 76.0
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 2.2e-96 356.7 375 76.0
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 2.2e-96 356.7 362 77.9
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 4.9e-96 355.5 402 61.7
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 4.9e-96 355.5 375 66.7
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 8.3e-96 354.8 375 78.1
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 8.3e-96 354.8 375 76.5
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 1.1e-95 354.4 376 74.7
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 1.4e-95 354.0 377 74.8
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 1.4e-95 354.0 375 74.9
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 1.9e-95 353.6 375 74.1
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 3.2e-95 352.8 376 75.5
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 4.1e-95 352.4 379 74.9
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 4.1e-95 352.4 379 74.9
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 5.4e-95 352.1 377 74.8
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 7.1e-95 351.7 376 75.8
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 1.6e-94 350.5 375 77.3
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 2.1e-94 350.1 375 75.2
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 2.1e-94 350.1 374 59.6
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 2.7e-94 349.7 378 73.0
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 2.7e-94 349.7 376 74.2
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 7.8e-94 348.2 372 74.7
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 1.7e-93 347.1 374 74.9
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 3.0e-93 346.3 365 75.9
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 3.9e-93 345.9 385 73.5
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 3.9e-93 345.9 375 76.0
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 1.1e-92 344.4 373 72.1
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 1.1e-92 344.4 378 74.9
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 2.5e-92 343.2 376 59.8
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 7.3e-92 341.7 384 76.3
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 9.5e-92 341.3 382 77.5
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.6e-91 340.5 375 74.9
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 6.2e-91 338.6 369 78.0
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 1.4e-90 337.4 377 76.4
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 1.8e-90 337.0 372 70.2
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.2e-89 334.3 368 74.7
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 4.4e-89 332.4 375 72.0
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 9.9e-89 331.3 385 70.6
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 1.3e-88 330.9 373 61.4
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 8.4e-88 328.2 367 70.0
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 1.4e-87 327.4 343 74.9
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 5.4e-87 325.5 368 73.6
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 7.1e-87 325.1 375 71.7
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 7.1e-87 325.1 377 72.4
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 9.2e-87 324.7 375 71.7
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 1.7e-85 320.5 365 70.7
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 3.9e-85 319.3 344 72.1
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.5e-84 317.4 398 67.3
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.5e-84 317.4 368 73.9
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 1.2e-83 314.3 376 70.7
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 6.9e-82 308.5 369 67.8
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 7.6e-81 305.1 357 70.6
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 1.2e-78 297.7 348 78.2
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 2.3e-77 293.5 348 77.9
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 6.6e-77 292.0 385 67.5
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 5.6e-76 288.9 356 72.5
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 2.1e-75 287.0 380 68.4
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 6.2e-75 285.4 359 69.6
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 6.9e-74 282.0 379 69.4
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 6.9e-74 282.0 380 68.2
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 6.9e-74 282.0 177 80.8
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 2.6e-73 280.0 392 65.3
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 9.9e-73 278.1 379 67.5
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 4.9e-72 275.8 384 68.2
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 6.4e-72 275.4 359 68.8
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 1.1e-71 274.6 496 38.1
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 1.4e-71 274.2 381 67.5
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 2.4e-71 273.5 382 68.1
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 3.2e-71 273.1 382 67.5
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 1.2e-70 271.2 383 64.8
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 3.5e-70 269.6 346 69.4
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 3.5e-70 269.6 360 67.2
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 4.6e-70 269.2 373 63.8
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 4.6e-70 269.2 373 63.8
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 4.6e-70 269.2 363 69.4
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 6.0e-70 268.9 334 73.7
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 7.9e-70 268.5 373 63.8
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.3e-69 267.7 328 64.6
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 8.7e-69 265.0 373 63.3
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 1.3e-67 261.2 334 72.5
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 2.1e-67 260.4 319 73.0
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 4.8e-67 259.2 383 68.4
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 2.6e-65 253.4 320 69.4
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 1.7e-64 250.8 372 62.6
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 2.2e-64 250.4 363 62.3
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 1.6e-62 244.2 366 62.3
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 2.7e-62 243.4 279 76.3
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 2.7e-62 243.4 381 42.0
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 3.9e-61 239.6 386 60.9
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 1.5e-60 237.7 377 50.9
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 2.1e-59 233.8 378 50.5
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 8.2e-59 231.9 362 63.0
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 5.8e-57 225.7 329 70.2
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 1.3e-56 224.6 362 63.0
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 7.9e-54 215.3 360 60.0
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 5.1e-53 212.6 167 65.9
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 2.5e-52 210.3 268 69.4
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 7.7e-49 198.7 310 65.2
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 2.5e-47 193.7 359 59.3
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.6e-46 191.0 378 54.2
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 6.7e-45 185.7 369 55.8
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 1.9e-44 184.1 166 60.2
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 6.3e-43 179.1 132 84.8
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 6.9e-42 175.6 298 61.1
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 2.6e-41 173.7 340 56.2
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 5.9e-41 172.6 292 61.6
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 1.7e-40 171.0 171 55.6
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 1.4e-39 167.9 132 75.8
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 3.9e-37 159.8 132 73.5
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 2.6e-36 157.1 308 59.1
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 5.2e-29 132.9 366 49.2
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 1.1e-26 125.2 146 50.0
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 3.5e-25 120.2 132 61.4
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 1.7e-24 117.9 115 63.5
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 5.0e-24 116.3 253 59.7
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 3.6e-22 110.2 243 62.1
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 2.6e-20 104.0 95 57.9
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 3.3e-20 103.6 394 45.7
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 5.3e-18 96.3 225 55.1
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 3.6e-14 83.6 58 84.5
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea HOM05D005383 ORTHO05D006722 6.1e-14 82.8 56 87.5
arahy.Tifrunner.gnm1.ann1.XX0GIY Arachis hypogaea HOM05D005383 ORTHO05D006722 3.0e-13 80.5 56 85.7
arahy.Tifrunner.gnm1.ann1.VA1YNF Arachis hypogaea HOM05D005383 ORTHO05D006722 1.5e-12 78.2 84 71.4


User provided reference genes

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