Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g02309 Beta vulgaris HOM05D003315 ORTHO05D003407 4.2e-237 824.3 421 100.0
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 6.7e-235 817.0 421 99.0
EL10Ac8g19549 Beta vulgaris HOM05D000096 ORTHO05D000045 4.2e-152 542.0 415 72.0
AUR62013944 Chenopodium quinoa HOM05D000096 ORTHO05D000045 5.2e-94 349.0 419 41.8
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.0e-49 201.8 242 44.2
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 4.8e-31 139.8 405 27.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.1e-30 138.7 407 27.5
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-30 137.9 404 28.0
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 1.2e-26 125.2 377 27.3
SEGI_23554 Sequoiadendron giganteum HOM05D000824 ORTHO05D003555 1.0e-25 122.1 382 24.1
HPP92_014050 Vanilla planifolia HOM05D000824 ORTHO05D003555 2.1e-23 114.4 423 24.1
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 2.8e-23 114.0 414 26.1
Hund30751 Selenicereus undatus HOM05D003315 ORTHO05D003407 6.2e-23 112.8 374 24.3
Ah.11g047720 Amaranthus hybridus HOM05D000824 ORTHO05D003555 1.1e-22 112.1 426 24.6
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 3.1e-22 110.5 369 24.9
TAR371G0671 Trochodendron aralioides HOM05D000824 ORTHO05D003555 5.3e-22 109.8 387 24.0
Hund12279 Selenicereus undatus HOM05D003315 ORTHO05D003407 2.0e-21 107.8 418 23.4
DCAR_023168 Daucus carota HOM05D000824 ORTHO05D003555 2.6e-21 107.5 341 24.9
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 3.4e-21 107.1 371 25.6
Hma1.2p1_0060F.1_g033050 Hydrangea macrophylla HOM05D000824 ORTHO05D003555 3.4e-21 107.1 341 24.0
PGSC0003DMG400024634 Solanum tuberosum HOM05D000824 ORTHO05D003555 3.4e-21 107.1 392 22.7
ECA247G3309 Erigeron canadensis HOM05D000824 ORTHO05D003555 7.6e-21 105.9 428 23.4
Sp6g34920 Schrenkiella parvula HOM05D000824 ORTHO05D003555 7.6e-21 105.9 381 23.6
BcaB01g05683 Brassica carinata HOM05D000824 ORTHO05D003555 1.3e-20 105.1 381 23.6
PGR083G2843 Punica granatum HOM05D000824 ORTHO05D003555 2.2e-20 104.4 389 24.2
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 3.8e-20 103.6 398 25.9
Psat4g047800 Pisum sativum HOM05D000824 ORTHO05D003555 3.8e-20 103.6 429 22.8
Hund12761 Selenicereus undatus HOM05D003315 ORTHO05D003407 3.8e-20 103.6 379 22.7
AL6G18370 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 4.9e-20 103.2 380 23.9
PSO017G4603 Papaver somniferum HOM05D000824 ORTHO05D003555 4.9e-20 103.2 387 22.0
Solyc03g115050.3 Solanum lycopersicum HOM05D000824 ORTHO05D003555 4.9e-20 103.2 389 22.4
AT5G61000 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 6.4e-20 102.8 422 24.4
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 6.4e-20 102.8 395 21.3
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 6.4e-20 102.8 432 23.8
Medtr4g109580 Medicago truncatula HOM05D000824 ORTHO05D003555 6.4e-20 102.8 343 23.3
A03p03540 Brassica napus HOM05D000824 ORTHO05D003555 8.4e-20 102.4 381 23.1
Pp3c1_20770 Physcomitrium patens HOM05D000824 ORTHO05D003555 8.4e-20 102.4 380 23.4
Hund13175 Selenicereus undatus HOM05D003315 ORTHO05D003407 8.4e-20 102.4 371 23.7
Carub.0006s0691 Capsella rubella HOM05D000824 ORTHO05D003555 1.1e-19 102.1 361 23.8
BcaB01g05642 Brassica carinata HOM05D000824 ORTHO05D003555 1.4e-19 101.7 381 23.4
Os03g0214100 Oryza sativa ssp. japonica HOM05D000824 ORTHO05D003555 1.4e-19 101.7 384 23.4
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.9e-19 101.3 338 26.0
Sopen03g034120 Solanum pennellii HOM05D000824 ORTHO05D003555 1.9e-19 101.3 389 22.1
AT5G08020 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 3.2e-19 100.5 381 23.4
A09p07190 Brassica napus HOM05D000824 ORTHO05D003555 3.2e-19 100.5 381 22.8
C07p44760 Brassica napus HOM05D000824 ORTHO05D003555 3.2e-19 100.5 360 23.6
BolC3t12936H Brassica oleracea HOM05D000824 ORTHO05D003555 3.2e-19 100.5 381 23.1
BraA03t13794Z Brassica rapa HOM05D000824 ORTHO05D003555 3.2e-19 100.5 390 22.3
CARHR274710 Cardamine hirsuta HOM05D000824 ORTHO05D003555 3.2e-19 100.5 422 23.5
AUR62021554 Chenopodium quinoa HOM05D000824 ORTHO05D003555 3.2e-19 100.5 429 22.6
Ah.02g114080 Amaranthus hybridus HOM05D000824 ORTHO05D003555 4.2e-19 100.1 427 24.6
arahy.Tifrunner.gnm1.ann1.J8WCL7 Arachis hypogaea HOM05D000824 ORTHO05D003555 4.2e-19 100.1 412 21.8
BraA03t09704Z Brassica rapa HOM05D000824 ORTHO05D003555 4.2e-19 100.1 381 23.1
Nn4g23436 Nelumbo nucifera HOM05D000824 ORTHO05D003555 5.5e-19 99.8 385 23.4
Thhalv10013014m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 7.1e-19 99.4 424 23.3
Sp2g24310 Schrenkiella parvula HOM05D000824 ORTHO05D003555 7.1e-19 99.4 381 24.1
BolC9t53717H Brassica oleracea HOM05D000824 ORTHO05D003555 9.3e-19 99.0 381 23.1
BraA09t36368Z Brassica rapa HOM05D000824 ORTHO05D003555 9.3e-19 99.0 385 22.6
Carub.0008s2169 Capsella rubella HOM05D000824 ORTHO05D003555 9.3e-19 99.0 424 23.3
Lalb_Chr13g0302831 Lupinus albus HOM05D000824 ORTHO05D003555 9.3e-19 99.0 383 22.2
PSO478G2603 Papaver somniferum HOM05D000824 ORTHO05D003555 9.3e-19 99.0 389 23.1
BcaC04g23467 Brassica carinata HOM05D000824 ORTHO05D003555 1.2e-18 98.6 381 22.8
BcaNung06900 Brassica carinata HOM05D000824 ORTHO05D003555 1.2e-18 98.6 390 22.1
C09p08030 Brassica napus HOM05D000824 ORTHO05D003555 1.2e-18 98.6 381 22.8
Hund14841 Selenicereus undatus HOM05D003315 ORTHO05D003407 1.2e-18 98.6 336 23.8
MSTRG.11337 Avicennia marina HOM05D000824 ORTHO05D003555 1.6e-18 98.2 383 23.5
MSTRG.22957 Avicennia marina HOM05D000824 ORTHO05D003555 1.6e-18 98.2 378 22.2
C03p03990 Brassica napus HOM05D000824 ORTHO05D003555 1.6e-18 98.2 381 23.1
AUR62008537 Chenopodium quinoa HOM05D000824 ORTHO05D003555 1.6e-18 98.2 429 22.6
Thhalv10003822m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 1.6e-18 98.2 424 22.9
A03p46710 Brassica napus HOM05D000824 ORTHO05D003555 2.1e-18 97.8 360 22.8
CARHR205160 Cardamine hirsuta HOM05D000824 ORTHO05D003555 2.1e-18 97.8 380 23.4
arahy.Tifrunner.gnm1.ann1.E3U0AR Arachis hypogaea HOM05D000824 ORTHO05D003555 2.7e-18 97.4 416 20.9
Hund09917 Selenicereus undatus HOM05D000824 ORTHO05D003555 2.7e-18 97.4 427 22.7
Zm00001eb400180 Zea mays HOM05D000824 ORTHO05D003555 2.7e-18 97.4 386 23.1
GSVIVG01007849001 Vitis vinifera HOM05D000824 ORTHO05D003555 3.5e-18 97.1 430 21.2
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 4.6e-18 96.7 332 28.3
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 7.9e-18 95.9 338 25.4
CsaV3_1G002970 Cucumis sativus L. HOM05D000824 ORTHO05D003555 7.9e-18 95.9 390 22.6
Ciclev10019317m.g Citrus clementina HOM05D000824 ORTHO05D003555 1.3e-17 95.1 426 21.6
Sed0027547 Sechium edule HOM05D000824 ORTHO05D003555 1.8e-17 94.7 388 22.9
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.3e-17 94.4 338 25.1
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 3.0e-17 94.0 392 23.7
Sed0022878 Sechium edule HOM05D000824 ORTHO05D003555 3.0e-17 94.0 390 22.8
ATR0177G023 Amborella trichopoda HOM05D000824 ORTHO05D003555 3.9e-17 93.6 384 20.6
Aa31LG3G18510 Aethionema arabicum HOM05D000824 ORTHO05D003555 5.1e-17 93.2 381 23.6
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 5.1e-17 93.2 378 23.3
Hund23247 Selenicereus undatus HOM05D003315 ORTHO05D003407 5.1e-17 93.2 337 24.0
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 8.7e-17 92.4 392 23.2
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 8.7e-17 92.4 411 23.6
SMO358G0534 Selaginella moellendorffii HOM05D000824 ORTHO05D003555 8.7e-17 92.4 422 22.3
Duzib084G0695 Durio zibethinus HOM05D000824 ORTHO05D003555 1.1e-16 92.0 428 22.0
Zm00001eb008630 Zea mays HOM05D000824 ORTHO05D003555 1.5e-16 91.7 384 22.4
ClCG06G015600 Citrullus lanatus HOM05D000824 ORTHO05D003555 1.9e-16 91.3 409 22.0
AUR62028164 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.5e-16 90.9 392 22.7
Ah.02g111740 Amaranthus hybridus HOM05D003315 ORTHO05D003407 3.3e-16 90.5 208 33.2
Ah.16g100850 Amaranthus hybridus HOM05D003315 ORTHO05D003407 3.3e-16 90.5 208 33.2
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 5.6e-16 89.7 244 25.0
AUR62036582 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.6e-16 89.7 347 25.1
CANSAT78G1911 Cannabis sativa HOM05D000096 ORTHO05D010619 7.4e-16 89.4 258 27.1
MELO3C017228.2 Cucumis melo HOM05D000824 ORTHO05D003555 9.6e-16 89.0 398 22.6
BcaB08g37297 Brassica carinata HOM05D000824 ORTHO05D003555 2.1e-15 87.8 376 21.8
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 2.1e-15 87.8 359 20.9
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 2.1e-15 87.8 223 28.7
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 2.8e-15 87.4 277 22.4
AUR62008720 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.8e-15 87.4 424 22.6
BcaC06g33184 Brassica carinata HOM05D000824 ORTHO05D003555 3.7e-15 87.0 344 22.7
AUR62008601 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.7e-15 87.0 357 23.2
Gohir.D03G096700 Gossypium hirsutum HOM05D000824 ORTHO05D003555 3.7e-15 87.0 387 21.2
CANSAT11G0110 Cannabis sativa HOM05D009267 ORTHO05D010384 4.8e-15 86.7 212 30.7
AUR62041240 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.8e-15 86.7 380 22.9
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 1.1e-14 85.5 211 27.5
AUR62042709 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.8e-14 84.7 429 22.8
TAR629G0759 Trochodendron aralioides HOM05D000824 ORTHO05D003555 1.8e-14 84.7 290 23.4
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 2.4e-14 84.3 400 23.5
AUR62039628 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.1e-14 84.0 370 22.7
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 3.1e-14 84.0 236 26.3
Ah.14g080970 Amaranthus hybridus HOM05D003315 ORTHO05D003407 6.9e-14 82.8 179 32.4
AUR62008792 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.9e-14 82.8 429 22.4
AUR62008794 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.9e-14 82.8 429 22.4
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 6.9e-14 82.8 223 26.0
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 9.0e-14 82.4 258 23.6
AUR62032045 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.0e-13 81.3 431 22.5
AUR62010656 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.4e-13 80.5 377 21.5
AUR62033963 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.4e-13 80.5 376 22.6
AUR62031226 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.6e-13 79.3 287 24.0
Ah.04g158040 Amaranthus hybridus HOM05D003315 ORTHO05D003407 1.0e-12 79.0 329 23.4
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 1.0e-12 79.0 245 26.5
AUR62028024 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.2e-12 77.8 421 23.8
Oeu013093.1 Olea europaea HOM05D019936 ORTHO05D010619 2.2e-12 77.8 301 22.3
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 6.5e-12 76.3 426 22.8
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-12 76.3 387 23.0
TAR629G1891 Trochodendron aralioides HOM05D000824 ORTHO05D000065 6.5e-12 76.3 367 21.3
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 8.4e-12 75.9 323 24.5
AUR62022786 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.4e-12 75.9 425 23.3
EL10Ac7g18197 Beta vulgaris HOM05D003315 ORTHO05D003407 2.5e-11 74.3 452 21.7
Dinv36352 Davidia involucrata HOM05D009267 ORTHO05D000302 5.5e-11 73.2 215 25.1
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 7.1e-11 72.8 237 26.2
vmacro10190 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.2e-10 72.0 337 23.1
vmacro23524 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.2e-10 72.0 337 23.1
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 2.1e-10 71.2 197 29.4
Ah.09g226650 Amaranthus hybridus HOM05D003315 ORTHO05D003407 2.7e-10 70.9 232 28.4
CBR_g23266 Chara braunii HOM05D000824 ORTHO05D003555 4.6e-10 70.1 410 20.0
AUR62013574 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.0e-10 69.7 242 25.2
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 6.0e-10 69.7 246 25.2
AUR62027559 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.9e-10 69.3 302 23.2
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-10 69.3 241 22.4
SHI27090 Sapria himalayana HOM05D000824 ORTHO05D003555 1.0e-09 68.9 333 21.0
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-09 68.9 363 19.6
CDE12G0883 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 1.3e-09 68.6 287 24.0
Ah.04g157960 Amaranthus hybridus HOM05D003315 ORTHO05D003407 1.8e-09 68.2 165 30.9
AUR62041114 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.3e-09 67.8 168 23.8
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 3.0e-09 67.4 177 26.0
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 3.0e-09 67.4 177 26.0
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-09 66.2 285 23.5
ATR0598G158 Amborella trichopoda HOM05D000824 ORTHO05D002221 1.1e-08 65.5 345 21.7
EL10Ac4g07893 Beta vulgaris HOM05D003315 ORTHO05D003407 1.5e-08 65.1 431 23.2
AUR62036717 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.9e-08 64.7 222 26.6
AUR62041865 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.9e-08 64.7 421 21.4
AUR62041866 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.9e-08 64.7 421 21.4
AUR62000795 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.4e-08 62.8 169 27.8
AUR62041112 Chenopodium quinoa HOM05D003315 ORTHO05D003407 9.7e-08 62.4 194 28.4
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 1.3e-07 62.0 358 22.3
AUR62024929 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.3e-07 62.0 195 24.6
AUR62035494 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.6e-07 61.6 248 24.2
PRCOL_00004229 Prasinoderma coloniale HOM05D001939 ORTHO05D002051 1.6e-07 61.6 379 20.6
PSO063G1428 Papaver somniferum HOM05D000824 ORTHO05D002221 2.2e-07 61.2 386 18.9
vmacro17144 Vaccinium macrocarpon HOM05D000824 ORTHO05D002221 2.8e-07 60.8 356 20.5
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.8e-07 60.1 291 22.7
CANSAT21G1209 Cannabis sativa HOM05D009267 ORTHO05D010384 6.3e-07 59.7 138 31.9
Migut.J00947 Erythranthe guttata HOM05D000824 ORTHO05D002221 6.3e-07 59.7 352 21.0
CANSAT11G0124 Cannabis sativa HOM05D009267 ORTHO05D010384 8.2e-07 59.3 172 28.5
Oeu058483.1 Olea europaea HOM05D008860 ORTHO05D010619 8.2e-07 59.3 204 18.6
Ah.04g156180 Amaranthus hybridus HOM05D003315 ORTHO05D003407 1.1e-06 58.9 194 28.4
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.4e-06 58.5 401 21.4
AUR62013598 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.4e-06 58.5 279 21.9
PSO782G4142 Papaver somniferum HOM05D000824 ORTHO05D002221 1.4e-06 58.5 380 19.2
Psat1g132720 Pisum sativum HOM05D000824 ORTHO05D002221 1.8e-06 58.2 353 20.7
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-06 58.2 261 21.5
ECA246G1912 Erigeron canadensis HOM05D000824 ORTHO05D002221 5.3e-06 56.6 348 19.5
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-06 56.6 362 19.3
Peaxi162Scf00724g00059 Petunia axillaris HOM05D000824 ORTHO05D002221 6.9e-06 56.2 389 18.8


User provided reference genes

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