Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g01304 Beta vulgaris HOM05D001987 ORTHO05D006514 1.3e-105 386.3 191 100.0
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 2.2e-36 156.4 84 90.5
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.8e-36 155.6 84 90.5
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-36 155.2 84 90.5
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-36 155.2 84 90.5
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.0e-36 155.2 84 90.5
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 6.5e-36 154.8 84 89.3
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 1.4e-35 153.7 103 75.7
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 1.9e-35 153.3 84 89.3
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-35 153.3 82 91.5
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 2.5e-35 152.9 84 88.1
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 3.2e-35 152.5 84 89.3
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 3.2e-35 152.5 84 88.1
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 5.5e-35 151.8 103 74.8
Peaxi162Scf00238g00149 Petunia axillaris HOM05D001987 ORTHO05D006514 5.5e-35 151.8 84 88.1
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 4.6e-34 148.7 84 85.7
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 2.3e-33 146.4 84 83.3
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 2.3e-33 146.4 84 83.3
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 2.3e-33 146.4 84 83.3
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.5e-32 143.7 84 82.1
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 2.0e-32 143.3 84 84.5
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 3.3e-32 142.5 84 82.1
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 3.3e-32 142.5 84 82.1
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 5.7e-32 141.7 84 83.3
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 7.4e-32 141.4 90 76.7
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 9.7e-32 141.0 84 82.1
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 1.3e-31 140.6 84 81.0
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 4.8e-31 138.7 90 74.4
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 4.8e-31 138.7 84 81.0
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 1.1e-30 137.5 87 80.5
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 1.1e-30 137.5 87 80.5
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 2.4e-30 136.3 84 81.0
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.1e-30 136.0 84 83.3
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 3.1e-30 136.0 84 83.3
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 4.1e-30 135.6 86 80.2
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 5.3e-30 135.2 84 79.8
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 5.3e-30 135.2 84 79.8
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 5.3e-30 135.2 84 79.8
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.3e-30 135.2 84 79.8
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 5.3e-30 135.2 84 79.8
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 6.9e-30 134.8 84 78.6
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 1.5e-29 133.7 84 78.6
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 2.0e-29 133.3 86 77.9
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 1.7e-28 130.2 85 77.6
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 6.5e-28 128.3 84 77.4
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 6.5e-28 128.3 84 77.4
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 8.5e-28 127.9 85 76.5
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-27 127.1 84 78.6
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 2.5e-27 126.3 84 75.0
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 3.2e-27 125.9 70 87.1
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 3.2e-27 125.9 84 76.2
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.2e-26 124.0 87 71.3
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.3e-24 115.9 74 79.7
Nitab4.5_0011784g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.4e-24 114.8 62 88.7
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 1.7e-23 113.6 67 80.6
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 7.0e-22 108.2 83 72.3
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.6e-21 106.3 83 66.3
Nitab4.5_0000334g0040 Nicotiana tabacum HOM05D001987 ORTHO05D006514 2.9e-20 102.8 59 84.7
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 8.5e-20 101.3 61 78.7
EL10As2g23229 Beta vulgaris HOM05D035069 ORTHO05D000106 1.2e-18 97.4 179 38.5
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 1.8e-17 93.6 84 60.7
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.0e-17 92.4 87 59.8
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.0e-17 92.4 87 59.8
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.0e-17 92.4 87 59.8
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.0e-17 92.4 87 59.8
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.0e-17 92.4 87 59.8
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 5.2e-17 92.0 47 93.6
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 6.7e-17 91.7 84 59.5
Eucgr.J02744 Eucalyptus grandis HOM05D001987 ORTHO05D006514 3.3e-16 89.4 77 59.7
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.4e-16 89.0 87 58.6
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 2.8e-15 86.3 142 45.1
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.6e-13 80.5 47 80.9
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 4.5e-13 79.0 47 78.7
Lalb_Chr11g0070921 Lupinus albus HOM05D001987 ORTHO05D006514 4.5e-13 79.0 47 78.7
BraSC48t46330Z Brassica rapa HOM05D001987 ORTHO05D006514 1.0e-12 77.8 47 76.6
EL10As2g23219 Beta vulgaris HOM05D035069 ORTHO05D009929 1.7e-12 77.0 48 77.1
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 1.1e-11 74.3 47 78.7
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 2.7e-10 69.7 40 80.0
Lalb_Chr19g0127771 Lupinus albus HOM05D001987 ORTHO05D006514 2.7e-10 69.7 46 76.1
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.8e-08 61.2 37 75.7
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 2.8e-07 59.7 37 75.7
EL10Ac4g08880 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-06 57.4 29 86.2
EL10Ac5g11558 Beta vulgaris HOM05D000176 ORTHO05D012560 2.4e-06 56.6 29 89.7
Solyc05g045780.1 Solanum lycopersicum HOM05D001987 ORTHO05D004018 4.1e-06 55.8 37 73.0
Solyc05g045824.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.1e-06 55.8 35 74.3


User provided reference genes

Program Settings