Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 3.8e-246 854.4 419 100.0
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 4.7e-196 688.0 415 79.8
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 4.0e-195 684.9 415 79.8
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.9e-183 644.4 421 76.2
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 6.6e-166 587.8 432 69.4
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 8.6e-158 560.8 413 68.5
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 1.5e-138 496.9 406 64.0
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 4.9e-137 491.9 414 59.2
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 4.2e-136 488.8 413 59.6
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 7.1e-136 488.0 413 59.8
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 1.7e-134 483.4 438 57.5
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 3.9e-134 482.3 414 59.4
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 6.6e-134 481.5 417 59.5
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 8.7e-134 481.1 413 58.8
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 5.6e-133 478.4 424 59.4
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 2.1e-132 476.5 412 58.7
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 8.1e-132 474.6 414 58.2
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 9.0e-131 471.1 422 59.0
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 1.5e-130 470.3 417 59.2
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 2.0e-130 469.9 414 57.7
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.9e-129 466.1 423 58.2
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 4.9e-129 465.3 418 57.7
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.4e-128 463.0 414 56.8
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 9.3e-128 461.1 414 57.2
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.6e-127 460.3 420 58.1
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 2.1e-127 459.9 411 58.6
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 2.7e-127 459.5 425 56.9
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.7e-127 459.5 423 57.2
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 1.8e-126 456.8 411 56.7
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 2.3e-126 456.4 415 58.8
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 3.0e-126 456.1 396 60.4
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 6.7e-126 454.9 414 57.0
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.1e-125 454.1 418 56.7
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 2.5e-125 453.0 409 57.2
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 3.3e-125 452.6 411 56.0
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 3.3e-125 452.6 410 57.3
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 9.6e-125 451.1 415 56.1
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.3e-124 450.7 437 55.4
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 2.1e-124 449.9 433 55.4
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 2.8e-124 449.5 421 55.3
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 3.7e-124 449.1 432 54.9
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.1e-124 448.0 411 57.9
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 1.1e-123 447.6 409 56.7
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 2.4e-123 446.4 410 56.6
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 9.0e-123 444.5 416 56.2
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 1.2e-122 444.1 389 60.2
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 2.6e-122 443.0 421 54.6
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.5e-122 442.2 411 55.7
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 4.5e-122 442.2 453 52.5
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 2.2e-121 439.9 452 52.2
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 2.9e-121 439.5 410 56.3
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 4.9e-121 438.7 409 57.2
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 1.4e-120 437.2 399 58.4
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.4e-120 437.2 402 57.7
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 1.9e-120 436.8 414 54.6
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 1.2e-119 434.1 423 54.4
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 2.7e-119 433.0 387 57.4
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.5e-119 432.6 420 56.9
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 4.6e-119 432.2 415 54.7
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 6.0e-119 431.8 422 54.7
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 1.0e-118 431.0 418 53.6
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 3.9e-118 429.1 406 55.9
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 8.7e-118 427.9 421 53.2
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 1.1e-117 427.6 412 54.4
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 2.5e-117 426.4 417 52.3
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 4.3e-117 425.6 421 53.2
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 9.6e-117 424.5 410 53.7
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 3.7e-116 422.5 354 59.6
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 2.4e-115 419.9 431 53.1
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 6.9e-115 418.3 426 52.1
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 6.9e-115 418.3 432 52.3
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 1.0e-113 414.5 408 53.4
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 4.9e-113 412.1 447 49.9
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 6.5e-113 411.8 386 56.7
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 3.2e-112 409.5 381 56.4
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.2e-111 407.5 412 52.4
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 4.6e-111 405.6 353 58.9
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 6.3e-108 395.2 349 59.3
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 6.3e-108 395.2 356 58.1
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 1.1e-107 394.4 481 45.7
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 3.8e-105 386.0 376 54.3
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.8e-102 377.1 362 57.2
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 5.7e-101 372.1 414 50.2
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 9.7e-101 371.3 352 57.4
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.2e-100 370.2 341 55.7
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 3.7e-100 369.4 400 51.8
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 3.6e-95 352.8 418 48.6
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 4.7e-95 352.4 373 52.3
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 7.9e-95 351.7 434 46.8
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 8.2e-92 341.7 310 56.5
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.2e-90 337.8 410 47.3
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.3e-89 334.3 388 49.7
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 3.2e-88 329.7 312 55.4
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.6e-87 326.2 188 83.5
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 6.1e-87 325.5 332 52.4
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.1e-85 321.2 189 83.1
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 4.1e-83 312.8 279 59.5
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 7.7e-82 308.5 279 58.1
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 3.2e-80 303.1 393 47.6
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 2.1e-79 300.4 220 65.9
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 3.3e-77 293.1 409 42.3
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 2.2e-76 290.4 510 38.0
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 4.4e-69 266.2 278 53.6
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 2.8e-68 263.5 340 46.2
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 9.1e-67 258.5 515 35.1
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 1.3e-65 254.6 432 37.3
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.8e-65 253.1 284 50.4
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 5.5e-64 249.2 224 57.6
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 1.8e-62 244.2 305 44.3
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 5.2e-62 242.7 242 52.5
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 3.7e-60 236.5 244 52.0
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 5.8e-53 212.6 403 37.5
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 3.7e-52 209.9 425 36.0
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 9.2e-51 205.3 342 40.6
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 7.8e-50 202.2 283 44.5
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 1.5e-48 198.0 125 78.4
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 1.6e-47 194.5 229 48.9
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.8e-46 191.0 108 83.3
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 1.9e-43 181.0 98 90.8
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 2.4e-43 180.6 178 53.4
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 9.2e-43 178.7 281 41.6
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 7.8e-42 175.6 160 54.4
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.3e-40 170.2 193 47.2
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 5.2e-38 162.9 428 32.0
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 2.3e-33 147.5 129 56.6
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 6.8e-30 136.0 152 48.0
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 4.9e-28 129.8 410 26.6
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 1.6e-26 124.8 411 29.4
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 2.1e-26 124.4 86 68.6
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-26 124.4 91 67.0
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 3.5e-26 123.6 88 67.0
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.7e-23 113.2 130 48.5
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 6.2e-23 112.8 820 21.2
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 9.9e-21 105.5 135 45.2
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 2.5e-16 90.9 228 30.7
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 1.6e-15 88.2 347 27.7
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 6.9e-14 82.8 279 28.7
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 3.4e-13 80.5 92 50.0
Cfa026016 Carpinus fangiana HOM05D000280 ORTHO05D000632 5.3e-06 56.6 119 31.9
MD07G1140100 Malus domestica HOM05D005745 ORTHO05D006857 6.9e-06 56.2 61 50.8


User provided reference genes

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