Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 4.8e-61 237.7 121 100.0
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 3.3e-54 214.9 129 86.8
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 9.7e-54 213.4 129 86.0
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.3e-53 213.0 125 86.4
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 1.3e-53 213.0 125 86.4
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 1.3e-53 213.0 125 86.4
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 2.2e-53 212.2 130 85.4
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.2e-53 212.2 125 86.4
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.2e-53 212.2 125 86.4
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 3.7e-53 211.5 125 87.2
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 8.2e-53 210.3 125 85.6
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 1.1e-52 209.9 129 84.5
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.1e-52 208.0 125 85.6
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.1e-52 208.0 125 85.6
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 7.0e-52 207.2 128 85.2
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 7.0e-52 207.2 125 84.8
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 1.6e-51 206.1 129 82.9
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.6e-51 206.1 125 84.8
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 2.0e-51 205.7 125 83.2
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 2.7e-51 205.3 131 80.9
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 3.5e-51 204.9 125 84.0
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 7.7e-51 203.8 124 84.7
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 7.7e-51 203.8 129 79.8
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 3.8e-50 201.4 127 83.5
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 1.1e-49 199.9 130 80.0
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 1.1e-49 199.9 125 80.8
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.1e-49 199.9 125 81.6
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 5.5e-49 197.6 124 82.3
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 5.5e-49 197.6 143 74.1
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 7.2e-49 197.2 125 80.8
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 7.2e-49 197.2 125 80.0
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 7.2e-49 197.2 129 77.5
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 9.4e-49 196.8 120 81.7
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 9.4e-49 196.8 130 77.7
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 9.4e-49 196.8 116 81.0
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.2e-48 196.4 124 81.5
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 2.1e-48 195.7 130 78.5
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 6.1e-48 194.1 126 77.8
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 6.1e-48 194.1 116 84.5
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 6.1e-48 194.1 136 76.5
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 6.1e-48 194.1 116 81.9
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 8.0e-48 193.7 115 82.6
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 1.0e-47 193.4 130 77.7
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.8e-47 192.6 124 78.2
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 2.3e-47 192.2 124 78.2
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.0e-47 191.8 126 78.6
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.0e-47 191.8 126 78.6
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 3.0e-47 191.8 125 77.6
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 3.0e-47 191.8 142 72.5
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 4.0e-47 191.4 124 77.4
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 5.2e-47 191.0 129 79.8
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 6.8e-47 190.7 124 76.6
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 8.8e-47 190.3 113 82.3
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 8.8e-47 190.3 120 78.3
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 1.2e-46 189.9 125 77.6
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.2e-46 189.9 124 78.2
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 1.2e-46 189.9 117 80.3
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.2e-46 189.9 124 79.0
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 1.5e-46 189.5 124 78.2
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 1.5e-46 189.5 124 78.2
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 1.5e-46 189.5 132 75.8
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 2.6e-46 188.7 124 76.6
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 2.6e-46 188.7 106 89.6
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 3.4e-46 188.3 120 77.5
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 3.4e-46 188.3 115 80.0
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 4.4e-46 188.0 124 76.6
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 5.7e-46 187.6 124 76.6
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 5.7e-46 187.6 121 80.2
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 5.7e-46 187.6 115 79.1
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 7.5e-46 187.2 124 76.6
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 7.5e-46 187.2 115 79.1
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 1.7e-45 186.0 114 79.8
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 2.2e-45 185.7 106 87.7
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 2.8e-45 185.3 124 75.8
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 2.8e-45 185.3 132 72.0
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 2.8e-45 185.3 120 76.7
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 3.7e-45 184.9 105 84.8
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 3.7e-45 184.9 124 75.0
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 4.8e-45 184.5 108 82.4
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 4.8e-45 184.5 132 71.2
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 1.1e-44 183.3 115 78.3
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.1e-44 183.3 115 78.3
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 1.4e-44 183.0 113 78.8
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.8e-44 182.6 124 78.2
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 2.4e-44 182.2 111 81.1
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 3.1e-44 181.8 124 74.2
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 3.1e-44 181.8 124 75.8
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 4.1e-44 181.4 127 74.8
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 7.0e-44 180.6 167 62.3
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 2.0e-43 179.1 122 72.1
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 2.0e-43 179.1 126 70.6
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 2.7e-43 178.7 124 72.6
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 3.5e-43 178.3 122 72.1
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 4.5e-43 177.9 105 82.9
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 5.9e-43 177.6 122 73.8
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 1.0e-42 176.8 124 71.0
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 1.7e-42 176.0 122 74.6
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 6.5e-42 174.1 131 70.2
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 8.5e-42 173.7 154 61.0
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 1.1e-41 173.3 124 70.2
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.9e-41 172.6 111 75.7
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 3.2e-41 171.8 123 69.1
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 3.2e-41 171.8 128 68.8
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 5.5e-41 171.0 125 69.6
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 2.1e-40 169.1 127 65.4
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 2.1e-40 169.1 127 65.4
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 2.1e-40 169.1 127 65.4
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 2.8e-40 168.7 123 68.3
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 4.7e-40 167.9 121 67.8
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 4.7e-40 167.9 129 75.2
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 6.1e-40 167.5 110 71.8
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 6.1e-40 167.5 110 71.8
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 6.1e-40 167.5 118 69.5
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 6.1e-40 167.5 97 80.4
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 8.0e-40 167.2 105 74.3
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 8.0e-40 167.2 105 74.3
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 8.0e-40 167.2 116 69.8
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.0e-39 166.8 150 62.7
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 1.4e-39 166.4 123 67.5
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 2.3e-39 165.6 116 73.3
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 5.2e-39 164.5 95 85.3
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 1.2e-38 163.3 112 70.5
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.5e-38 162.9 119 69.7
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.6e-38 162.2 118 66.9
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 3.4e-38 161.8 119 68.1
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 6.3e-37 157.5 164 54.9
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 8.3e-37 157.1 119 65.5
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.8e-36 156.0 88 85.2
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 4.1e-36 154.8 104 76.0
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 5.4e-36 154.5 109 66.1
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 5.4e-36 154.5 106 69.8
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 7.0e-36 154.1 112 66.1
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 4.5e-35 151.4 87 83.9
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 2.5e-33 145.6 114 64.9
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 4.3e-33 144.8 101 68.3
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 3.6e-32 141.7 96 74.0
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 2.3e-31 139.0 82 87.8
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 4.0e-31 138.3 93 75.3
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 5.2e-31 137.9 84 84.5
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 3.4e-30 135.2 81 81.5
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.7e-29 132.9 124 60.5
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-28 130.2 124 60.5
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 7.0e-28 127.5 78 79.5
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 7.0e-28 127.5 79 77.2
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 1.6e-24 116.3 76 73.7
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 2.1e-24 115.9 69 79.7
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 6.2e-24 114.4 63 82.5
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 1.4e-23 113.2 94 55.3
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 2.3e-23 112.5 91 58.2
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 2.3e-23 112.5 95 60.0
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 2.0e-22 109.4 56 96.4
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 7.8e-19 97.4 103 42.7
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 1.0e-18 97.1 52 90.4
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 1.9e-17 92.8 89 50.6
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 7.3e-17 90.9 124 46.8
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 4.4e-14 81.6 104 42.3
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 1.0e-10 70.5 95 35.8
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.7e-10 69.7 58 62.1
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.3e-09 65.5 38 84.2
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 5.2e-07 58.2 38 71.1
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 6.8e-07 57.8 97 32.0


User provided reference genes

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