Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 0.0e+00 1408.7 733 100.0
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 3.9e-254 881.7 723 71.0
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 4.7e-228 795.0 778 61.4
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 7.1e-224 781.2 824 55.1
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 9.3e-224 780.8 813 56.0
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 2.5e-221 772.7 827 56.3
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 2.8e-220 769.2 817 55.9
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 5.3e-219 765.0 813 55.1
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 5.3e-219 765.0 825 54.4
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 2.0e-218 763.1 821 54.1
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 9.9e-218 760.8 822 54.1
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 3.8e-217 758.8 826 55.4
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 4.6e-215 751.9 814 54.7
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 2.3e-214 749.6 812 54.8
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 3.9e-214 748.8 791 56.8
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 3.9e-214 748.8 827 54.2
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 1.1e-213 747.3 830 52.2
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 7.4e-213 744.6 822 52.8
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.6e-212 742.3 820 53.2
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 8.1e-212 741.1 813 54.0
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.4e-211 740.3 820 53.4
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 2.4e-211 739.6 838 52.1
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 5.3e-211 738.4 834 53.0
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 6.9e-211 738.0 824 54.0
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 9.0e-211 737.6 821 55.3
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 2.0e-210 736.5 825 53.0
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 2.6e-210 736.1 811 52.7
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 4.5e-210 735.3 818 52.9
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 5.8e-210 734.9 855 51.9
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 9.9e-210 734.2 811 52.5
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 3.5e-207 725.7 828 53.4
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 4.6e-207 725.3 813 53.4
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 2.3e-206 723.0 860 49.2
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 2.3e-206 723.0 823 54.1
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 5.1e-206 721.8 836 52.5
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 6.7e-206 721.5 807 52.7
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 3.3e-205 719.2 824 53.4
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 1.3e-204 717.2 808 53.3
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.4e-203 713.8 808 53.1
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 2.4e-203 713.0 851 51.9
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 2.4e-203 713.0 816 52.9
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 6.9e-203 711.4 826 52.3
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 1.5e-202 710.3 832 52.2
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 3.4e-202 709.1 823 53.3
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 3.4e-202 709.1 828 51.2
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 2.2e-201 706.4 821 51.6
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 3.5e-199 699.1 827 51.3
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 1.3e-198 697.2 722 55.1
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 5.1e-198 695.3 813 52.2
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 1.9e-197 693.3 822 51.6
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 1.9e-197 693.3 716 57.7
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 5.7e-197 691.8 824 51.1
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 4.8e-196 688.7 833 51.4
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 1.1e-195 687.6 816 50.9
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 4.5e-194 682.2 836 50.8
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 2.9e-193 679.5 812 52.0
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 7.2e-192 674.9 840 53.1
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 7.2e-192 674.9 825 49.7
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 3.6e-191 672.5 856 50.2
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 6.1e-191 671.8 814 49.6
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 3.3e-189 666.0 824 48.3
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 7.4e-189 664.8 816 50.6
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 6.9e-187 658.3 803 50.4
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 3.4e-186 656.0 835 49.0
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 2.2e-185 653.3 820 48.7
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 2.9e-185 652.9 827 50.7
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 5.0e-185 652.1 771 52.3
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 4.4e-181 639.0 843 49.6
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 9.7e-181 637.9 830 48.3
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 5.3e-179 632.1 982 45.0
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 2.2e-177 626.7 805 48.3
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 3.2e-176 622.9 812 48.5
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 5.5e-176 622.1 758 50.3
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 7.2e-176 621.7 685 55.2
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 7.2e-176 621.7 799 48.4
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 1.1e-173 614.4 764 49.5
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 1.5e-173 614.0 795 49.8
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 9.7e-173 611.3 830 47.8
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 2.8e-172 609.8 800 48.2
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 9.1e-171 604.7 898 45.1
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 2.6e-170 603.2 905 44.9
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 2.6e-170 603.2 902 44.9
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 7.7e-170 601.7 914 44.4
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 6.5e-169 598.6 815 47.1
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 1.5e-168 597.4 481 64.9
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 7.2e-168 595.1 816 48.5
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 7.2e-168 595.1 800 47.1
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 1.0e-166 591.3 803 46.1
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 4.0e-166 589.3 810 47.8
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 2.0e-165 587.0 802 46.0
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 3.3e-165 586.3 814 45.9
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 1.7e-164 583.9 824 46.5
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 2.2e-164 583.6 819 44.9
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 3.1e-163 579.7 816 45.0
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 2.2e-161 573.5 822 46.0
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 2.1e-159 567.0 544 57.5
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 4.7e-159 565.8 540 58.7
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 6.8e-158 562.0 357 76.2
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 2.6e-157 560.1 779 47.1
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 1.3e-156 557.8 816 45.2
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 4.8e-156 555.8 816 45.8
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 2.0e-154 550.4 354 74.6
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 2.5e-152 543.5 717 47.7
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 4.2e-152 542.7 1044 39.7
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 2.3e-150 537.0 717 47.6
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 3.0e-150 536.6 343 75.5
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 4.0e-150 536.2 362 71.8
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 9.8e-149 531.6 340 76.2
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 2.2e-148 530.4 815 44.3
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 1.9e-144 517.3 359 68.8
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 4.3e-144 516.2 791 44.6
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 2.8e-143 513.5 438 61.4
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 5.2e-142 509.2 382 64.9
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 2.6e-141 506.9 381 64.8
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 1.7e-137 494.2 378 66.9
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 5.2e-134 482.6 641 48.4
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 5.8e-133 479.2 341 68.0
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 1.1e-131 474.9 348 64.7
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.4e-131 474.6 350 63.7
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 4.3e-128 463.0 810 40.6
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 5.6e-128 462.6 317 74.1
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 1.4e-126 458.0 369 65.3
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 5.8e-125 452.6 638 46.7
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 6.4e-124 449.1 296 73.3
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.8e-119 433.7 501 49.9
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 9.9e-117 425.2 382 58.4
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 3.5e-114 416.8 777 39.6
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 7.3e-112 409.1 456 48.2
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 1.6e-111 407.9 275 72.7
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 6.2e-111 406.0 559 41.7
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 3.8e-108 396.7 380 51.3
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.1e-104 385.2 386 51.0
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 3.4e-101 373.6 381 49.1
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 7.6e-101 372.5 360 51.7
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 1.3e-100 371.7 612 42.8
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 7.9e-98 362.5 470 42.8
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 4.0e-94 350.1 647 39.6
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 4.6e-90 336.7 395 48.6
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.9e-83 314.7 556 39.7
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.2e-82 312.0 183 83.1
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 1.1e-75 288.9 411 41.8
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 6.3e-71 273.1 174 85.1
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.2e-69 268.9 185 72.4
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 5.9e-69 266.5 263 56.7
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 3.6e-66 257.3 196 65.3
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 7.4e-64 249.6 336 39.9
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 3.4e-61 240.7 181 63.5
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 2.2e-60 238.0 333 38.4
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 3.2e-59 234.2 415 43.1
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 2.7e-58 231.1 187 64.2
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 1.1e-56 225.7 408 40.9
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 1.1e-56 225.7 572 37.4
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 2.2e-55 221.5 405 40.0
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 1.7e-52 211.8 409 39.4
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 5.7e-48 196.8 363 36.9
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 7.5e-48 196.4 151 62.9
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 9.7e-48 196.1 425 36.5
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.8e-46 191.8 362 39.2
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 3.1e-46 191.0 101 91.1
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 1.2e-45 189.1 318 37.1
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 5.9e-45 186.8 424 38.7
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.2e-40 172.6 363 38.0
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 1.5e-40 172.2 421 35.2
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 1.0e-36 159.5 85 84.7
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 1.7e-36 158.7 310 38.1
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 6.6e-36 156.8 146 52.1
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.4e-25 122.5 411 30.7
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 1.8e-25 122.1 63 95.2
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 2.0e-24 118.6 137 52.6
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 1.4e-22 112.5 64 84.4
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.4e-22 111.7 177 42.4
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 1.6e-21 109.0 53 92.5
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 1.9e-19 102.1 65 73.8
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 6.4e-15 87.0 65 63.1
TPR.G16635 Trifolium pratense HOM05D003684 ORTHO05D004428 5.4e-14 84.0 201 36.8
HanXRQChr11g0344511 Helianthus annuus HOM05D003684 ORTHO05D004428 6.6e-12 77.0 60 80.0
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 7.3e-11 73.6 59 64.4
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 1.4e-09 69.3 52 63.5
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 8.9e-09 66.6 47 68.1
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 3.4e-08 64.7 56 60.7
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 7.5e-08 63.5 32 84.4
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 6.4e-07 60.5 39 76.9


User provided reference genes

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