Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 0.0e+00 1661.4 896 100.0
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 4.3e-106 390.2 443 55.3
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 5.6e-106 389.8 382 60.2
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 3.4e-103 380.6 381 60.1
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 1.1e-85 322.4 483 45.3
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 1.6e-81 308.5 462 44.8
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 3.7e-81 307.4 407 47.9
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 4.8e-81 307.0 420 46.9
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 1.4e-80 305.4 425 46.4
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 2.0e-79 301.6 414 47.6
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 2.9e-78 297.7 372 47.8
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.1e-77 295.8 435 44.4
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 4.2e-77 293.9 370 48.9
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 7.2e-77 293.1 383 48.0
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 9.4e-77 292.7 472 42.2
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 1.2e-76 292.4 357 49.6
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 2.1e-76 291.6 432 44.2
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 2.1e-76 291.6 434 44.0
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 2.7e-76 291.2 503 42.1
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.7e-76 291.2 368 48.9
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 3.6e-76 290.8 504 42.5
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 7.9e-76 289.7 352 50.9
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 1.4e-75 288.9 403 46.4
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 3.0e-75 287.7 453 44.4
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 5.1e-75 287.0 432 44.2
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 6.7e-75 286.6 429 44.5
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 8.8e-75 286.2 522 40.6
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 8.8e-75 286.2 434 43.3
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 1.1e-74 285.8 433 44.8
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 1.1e-74 285.8 434 43.1
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 1.5e-74 285.4 407 44.7
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 1.5e-74 285.4 518 41.5
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 1.9e-74 285.0 504 41.5
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 1.9e-74 285.0 517 40.8
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 4.3e-74 283.9 404 45.5
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 7.4e-74 283.1 432 44.0
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 7.4e-74 283.1 434 42.6
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 9.7e-74 282.7 433 43.9
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 2.8e-73 281.2 488 42.6
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 3.7e-73 280.8 433 43.4
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 4.8e-73 280.4 518 40.5
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 1.4e-72 278.9 460 40.7
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 1.4e-72 278.9 460 40.7
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.8e-72 278.5 518 40.5
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 3.1e-72 277.7 514 39.3
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 6.9e-72 276.6 524 38.9
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 1.2e-71 275.8 435 43.4
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 1.5e-71 275.4 479 42.2
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.6e-71 274.6 433 43.4
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-71 274.6 435 42.8
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 5.9e-71 273.5 479 40.1
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 7.7e-71 273.1 400 45.0
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 1.3e-70 272.3 435 42.3
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-70 272.3 435 43.0
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.3e-70 272.3 435 43.0
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.2e-70 271.6 406 43.8
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.8e-70 270.8 246 61.4
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.8e-70 270.8 246 61.4
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.8e-70 270.8 435 42.1
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 3.8e-70 270.8 243 60.1
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 6.5e-70 270.0 523 40.3
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 6.5e-70 270.0 237 61.2
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 1.4e-69 268.9 396 44.7
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 2.5e-69 268.1 431 43.2
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 2.5e-69 268.1 585 37.3
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 2.5e-69 268.1 433 43.4
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 4.2e-69 267.3 388 45.1
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 4.2e-69 267.3 393 44.8
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 5.5e-69 266.9 430 43.0
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 9.4e-69 266.2 441 42.9
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 2.1e-68 265.0 419 43.4
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 2.1e-68 265.0 410 43.7
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 2.7e-68 264.6 452 40.5
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 4.7e-68 263.8 267 55.8
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 6.1e-68 263.5 434 41.7
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 6.1e-68 263.5 385 45.2
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 6.1e-68 263.5 385 43.6
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 7.9e-68 263.1 483 40.0
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 1.4e-67 262.3 395 43.5
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 1.8e-67 261.9 389 44.5
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 1.8e-67 261.9 389 44.5
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 1.8e-67 261.9 503 38.6
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 3.0e-67 261.2 486 40.3
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 3.0e-67 261.2 525 38.3
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 8.8e-67 259.6 432 41.0
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 1.1e-66 259.2 392 44.4
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 1.1e-66 259.2 446 40.6
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 2.6e-66 258.1 432 40.3
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 4.4e-66 257.3 492 39.2
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 5.7e-66 256.9 486 39.1
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 7.4e-66 256.5 432 41.0
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 7.4e-66 256.5 410 42.7
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 9.7e-66 256.1 425 42.1
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.3e-65 255.8 369 44.4
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 2.8e-65 254.6 393 42.2
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.7e-65 254.2 452 40.7
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 4.8e-65 253.8 434 41.0
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 1.4e-64 252.3 432 41.0
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.8e-64 251.9 451 40.4
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.4e-64 251.5 549 36.4
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 3.1e-64 251.1 508 37.4
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 5.3e-64 250.4 389 41.9
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 7.0e-64 250.0 417 41.7
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 1.5e-63 248.8 393 41.0
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 4.5e-63 247.3 423 42.3
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 5.9e-63 246.9 351 44.2
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 5.9e-63 246.9 392 42.6
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 7.7e-63 246.5 432 39.6
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 1.0e-62 246.1 443 40.2
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.2e-62 245.0 464 36.6
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.2e-62 245.0 564 36.3
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 2.9e-62 244.6 433 39.7
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 8.5e-62 243.0 261 52.1
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.4e-61 242.3 561 36.0
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 1.4e-61 242.3 399 41.4
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.5e-61 241.5 400 41.8
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 3.2e-61 241.1 436 38.3
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 9.4e-61 239.6 346 45.1
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 2.1e-60 238.4 437 38.4
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.1e-60 238.4 401 40.6
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.1e-60 236.9 409 39.6
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 1.4e-59 235.7 412 41.0
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 1.4e-59 235.7 376 41.0
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 1.8e-59 235.3 464 36.0
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.0e-59 234.6 437 38.2
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 3.0e-59 234.6 296 48.0
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 3.9e-59 234.2 388 40.7
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.9e-59 234.2 440 38.4
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.5e-58 232.3 374 41.4
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 2.0e-58 231.9 396 38.4
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 4.4e-58 230.7 432 36.8
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 2.2e-57 228.4 356 43.3
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.8e-57 228.0 380 40.3
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 6.3e-57 226.9 379 38.3
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 8.2e-57 226.5 415 37.1
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 8.2e-57 226.5 245 52.2
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 4.1e-56 224.2 430 38.8
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 2.0e-55 221.9 405 37.3
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 2.0e-55 221.9 481 36.0
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.5e-55 220.7 504 35.5
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 8.5e-54 216.5 470 34.0
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.5e-53 215.7 472 34.5
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 7.2e-53 213.4 411 37.0
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.2e-52 212.6 376 40.4
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 6.1e-52 210.3 390 37.9
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 2.8e-49 201.4 426 36.4
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 4.8e-49 200.7 460 37.0
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 6.3e-49 200.3 407 36.9
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 1.8e-48 198.7 436 37.4
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 2.4e-48 198.4 564 30.3
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 4.1e-48 197.6 457 36.1
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 5.3e-48 197.2 348 39.1
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 3.2e-45 188.0 384 38.0
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 9.4e-45 186.4 428 33.9
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 8.0e-44 183.3 385 35.6
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 2.3e-43 181.8 431 33.6
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 2.0e-42 178.7 363 39.1
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.2e-41 175.3 399 33.6
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 2.2e-41 175.3 191 48.7
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 1.4e-27 129.4 113 54.0
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 3.0e-22 111.7 219 32.9
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 3.9e-22 111.3 239 31.8
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 6.8e-19 100.5 108 45.4
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 2.9e-17 95.1 132 40.2
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.5e-13 82.8 61 59.0
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 6.2e-12 77.4 369 27.6
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 2.3e-11 75.5 96 47.9
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 2.4e-08 65.5 47 66.0
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 5.1e-06 57.8 75 46.7


User provided reference genes

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