Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G2072 Erigeron canadensis HOM05D003406 ORTHO05D004026 1.4e-256 889.8 667 100.0
Dinv32032 Davidia involucrata HOM05D003406 ORTHO05D004026 3.4e-178 629.4 692 79.5
Actinidia06245 Actinidia chinensis HOM05D003406 ORTHO05D004026 1.2e-167 594.3 677 76.5
Cc00_g06910 Coffea canephora HOM05D003406 ORTHO05D004026 7.4e-165 585.1 680 77.8
HanXRQChr01g0004511 Helianthus annuus HOM05D003406 ORTHO05D004026 3.1e-163 579.7 667 79.6
Dinv09276 Davidia involucrata HOM05D003406 ORTHO05D004026 1.2e-162 577.8 694 56.9
Lsat_1_v5_gn_1_115021 Lactuca sativa HOM05D003406 ORTHO05D004026 6.5e-161 572.0 657 80.8
HanXRQChr15g0463071 Helianthus annuus HOM05D003406 ORTHO05D004026 5.5e-160 568.9 659 79.7
CSS0014544 Camellia sinensis var. sinensis HOM05D003406 ORTHO05D004026 3.0e-158 563.1 679 76.0
QL04p014965 Quercus lobata HOM05D003406 ORTHO05D004026 5.7e-157 558.9 690 77.2
Gohir.A10G183800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 2.2e-156 557.0 685 77.1
Prupe.2G034300 Prunus persica HOM05D003406 ORTHO05D004026 3.7e-156 556.2 685 75.9
Gorai.011G213900 Gossypium raimondii HOM05D003406 ORTHO05D004026 1.8e-155 553.9 685 77.4
QL04p014603 Quercus lobata HOM05D003406 ORTHO05D004026 1.8e-155 553.9 690 77.0
CiPaw.13G012800 Carya illinoinensis HOM05D003406 ORTHO05D004026 5.3e-155 552.4 692 74.4
SalBow5G0382 Salvia bowleyana HOM05D003406 ORTHO05D004026 7.7e-154 548.5 678 74.8
SalBow5G3900 Salvia bowleyana HOM05D003406 ORTHO05D004026 1.0e-153 548.1 679 74.7
Gohir.D10G190800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 1.3e-153 547.7 685 76.6
MD07G1038200 Malus domestica HOM05D003406 ORTHO05D004026 1.1e-152 544.7 703 72.5
CANSAT25G0328 Cannabis sativa HOM05D003406 ORTHO05D004026 2.3e-150 537.0 649 79.2
MELO3C005161.2 Cucumis melo HOM05D003406 ORTHO05D004026 2.3e-150 537.0 690 75.5
Duzib114G0281 Durio zibethinus HOM05D003406 ORTHO05D004026 5.2e-150 535.8 652 70.9
CsaV3_5G024420 Cucumis sativus L. HOM05D003406 ORTHO05D004026 1.2e-149 534.6 695 74.5
Ciclev10004445m.g Citrus clementina HOM05D003406 ORTHO05D004026 1.5e-149 534.3 680 75.3
Cfa010885 Carpinus fangiana HOM05D003406 ORTHO05D004026 2.6e-149 533.5 662 77.3
Thecc.10G162300 Theobroma cacao HOM05D003406 ORTHO05D004026 3.4e-149 533.1 685 75.5
Potri.001G026800 Populus trichocarpa HOM05D003406 ORTHO05D004026 7.5e-149 531.9 699 72.7
GSVIVG01013527001 Vitis vinifera HOM05D003406 ORTHO05D004026 7.5e-149 531.9 687 75.1
Migut.B01223 Erythranthe guttata HOM05D003406 ORTHO05D004026 9.8e-149 531.6 659 78.1
Manes.11G004700 Manihot esculenta HOM05D003406 ORTHO05D004026 9.8e-149 531.6 696 73.7
MSTRG.16987 Avicennia marina HOM05D003406 ORTHO05D004026 1.3e-148 531.2 679 72.6
Duzib106G0689 Durio zibethinus HOM05D003406 ORTHO05D004026 1.3e-148 531.2 676 74.6
Potri.003G197900 Populus trichocarpa HOM05D003406 ORTHO05D004026 2.8e-148 530.0 670 74.9
Eucgr.G03238 Eucalyptus grandis HOM05D003406 ORTHO05D004026 2.4e-147 526.9 678 77.1
Atru.chr12.1360 Acer truncatum HOM05D003406 ORTHO05D004026 2.7e-146 523.5 684 73.7
Nn7g36639 Nelumbo nucifera HOM05D003406 ORTHO05D004026 1.0e-145 521.5 694 74.6
Sc14g0005750 Simmondsia chinensis HOM05D003406 ORTHO05D004026 1.3e-145 521.2 689 73.6
Hund13347 Selenicereus undatus HOM05D003406 ORTHO05D004026 5.0e-145 519.2 664 74.5
TWI63G0701 Tripterygium wilfordii HOM05D003406 ORTHO05D004026 6.6e-145 518.8 660 75.2
FvH4_7g02880 Fragaria vesca HOM05D003406 ORTHO05D004026 2.5e-144 516.9 675 75.0
FAN03G3378 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.1e-143 513.8 675 74.8
CiPaw.14G007200 Carya illinoinensis HOM05D003406 ORTHO05D004026 1.8e-142 510.8 701 71.6
TAR369G0157 Trochodendron aralioides HOM05D003406 ORTHO05D004026 1.5e-141 507.7 684 72.5
Rhsim07G0066700 Rhododendron simsii HOM05D003406 ORTHO05D004026 2.0e-141 507.3 805 48.3
Sed0018149 Sechium edule HOM05D003406 ORTHO05D004026 2.0e-141 507.3 690 73.0
MD02G1288700 Malus domestica HOM05D003406 ORTHO05D004026 2.6e-141 506.9 694 63.0
Haze_03074 Corylus avellana HOM05D003406 ORTHO05D004026 5.7e-141 505.8 649 76.4
Potri.T125206 Populus trichocarpa HOM05D003406 ORTHO05D004026 5.7e-141 505.8 673 74.3
Manes.04G160100 Manihot esculenta HOM05D003406 ORTHO05D004026 1.3e-140 504.6 652 75.9
PSO561G0002 Papaver somniferum HOM05D003406 ORTHO05D004026 1.7e-140 504.2 709 70.5
RcHm_v2.0_Chr1g0323831 Rosa chinensis HOM05D003406 ORTHO05D004026 4.9e-140 502.7 675 74.2
PGR031G1802 Punica granatum HOM05D003406 ORTHO05D004026 4.1e-139 499.6 685 72.4
Aqoxy4G02704 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 2.7e-138 496.9 690 70.0
THA.LOC104826724 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 3.5e-138 496.5 664 74.4
FAN06G4607 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.9e-137 493.4 724 57.0
Glyma.13G198200 Glycine max HOM05D003406 ORTHO05D004026 1.9e-136 490.7 662 74.5
Phvul.011G207400 Phaseolus vulgaris HOM05D003406 ORTHO05D004026 2.5e-136 490.3 643 75.0
Nitab4.5_0001669g0120 Nicotiana tabacum HOM05D003406 ORTHO05D004026 3.3e-136 490.0 688 62.1
EL10Ac2g02817 Beta vulgaris HOM05D003406 ORTHO05D004026 9.5e-136 488.4 666 73.6
Ca_23943_v3 Cicer arietinum L. HOM05D003406 ORTHO05D004026 1.6e-135 487.6 674 72.6
Nitab4.5_0000151g0240 Nicotiana tabacum HOM05D003406 ORTHO05D004026 2.1e-135 487.3 688 63.2
vmacro13749 Vaccinium macrocarpon HOM05D003406 ORTHO05D004026 2.8e-135 486.9 821 51.3
ClCG01G007460 Citrullus lanatus HOM05D003406 ORTHO05D004026 4.7e-135 486.1 784 58.2
Peaxi162Scf00341g00714 Petunia axillaris HOM05D003406 ORTHO05D004026 1.8e-134 484.2 676 58.0
THA.LOC104819128 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 1.8e-134 484.2 631 74.8
Lalb_Chr01g0007801 Lupinus albus HOM05D003406 ORTHO05D004026 3.1e-134 483.4 671 72.4
PSO063G0746 Papaver somniferum HOM05D003406 ORTHO05D004026 1.5e-133 481.1 699 71.5
Actinidia10165 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.4e-131 473.8 649 47.8
Medtr8g038550 Medicago truncatula HOM05D003406 ORTHO05D004026 4.6e-130 469.5 679 71.3
VMungo1127G0085 Vigna mungo HOM05D003406 ORTHO05D004026 5.0e-129 466.1 691 55.4
Lalb_Chr19g0132381 Lupinus albus HOM05D003406 ORTHO05D004026 8.0e-127 458.8 685 69.9
AUR62026878 Chenopodium quinoa HOM05D003406 ORTHO05D004026 3.4e-125 453.4 653 72.7
Glyma.15G236500 Glycine max HOM05D003406 ORTHO05D004026 2.9e-124 450.3 652 73.0
Sopen08g020990 Solanum pennellii HOM05D003406 ORTHO05D004026 3.9e-121 439.9 677 70.5
Solyc08g067040.4 Solanum lycopersicum HOM05D003406 ORTHO05D004026 5.1e-121 439.5 678 70.4
arahy.Tifrunner.gnm1.ann1.07MYST Arachis hypogaea HOM05D003406 ORTHO05D004026 4.7e-119 433.0 696 59.5
Lj7A583T43 Lonicera japonica HOM05D003406 ORTHO05D004026 8.1e-119 432.2 608 72.9
AUR62037187 Chenopodium quinoa HOM05D003406 ORTHO05D004026 1.4e-118 431.4 661 67.6
SGA_v2.0_scaffold124G33625 Striga asiatica HOM05D003406 ORTHO05D004026 1.8e-118 431.0 520 70.4
AL6G24100 Arabidopsis lyrata HOM05D003406 ORTHO05D004026 7.6e-117 425.6 613 75.5
AT5G13480 Arabidopsis thaliana HOM05D003406 ORTHO05D004026 2.9e-116 423.7 614 74.8
Psat4g192120 Pisum sativum HOM05D003406 ORTHO05D004026 1.4e-115 421.4 527 80.8
BcaB01g05356 Brassica carinata HOM05D003406 ORTHO05D004026 1.9e-115 421.0 644 72.2
Thhalv10012890m.g Eutrema salsugineum HOM05D003406 ORTHO05D004026 1.9e-115 421.0 639 74.3
A03p06010 Brassica napus HOM05D003406 ORTHO05D004026 2.1e-114 417.5 664 70.8
Sabra01G0019600 Salix brachista HOM05D003406 ORTHO05D004026 6.0e-114 416.0 685 48.3
Zm00001eb140970 Zea mays HOM05D003406 ORTHO05D004026 2.3e-113 414.1 646 68.6
Carub.0006s1164 Capsella rubella HOM05D003406 ORTHO05D004026 3.0e-113 413.7 618 73.6
Sp6g30540 Schrenkiella parvula HOM05D003406 ORTHO05D004026 1.6e-111 407.9 666 70.4
BraA03t09938Z Brassica rapa HOM05D003406 ORTHO05D004026 3.1e-110 403.7 686 69.7
HPP92_025009 Vanilla planifolia HOM05D003406 ORTHO05D004026 6.8e-110 402.5 707 64.2
C03p07050 Brassica napus HOM05D003406 ORTHO05D004026 2.6e-109 400.6 660 71.1
arahy.Tifrunner.gnm1.ann1.P8HZNX Arachis hypogaea HOM05D003406 ORTHO05D004026 4.4e-109 399.8 695 66.6
Aa31LG11G7380 Aethionema arabicum HOM05D003406 ORTHO05D004026 7.6e-109 399.1 675 68.0
BolC3t13203H Brassica oleracea HOM05D003406 ORTHO05D004026 1.4e-107 394.8 673 60.5
BraA02t05170Z Brassica rapa HOM05D003406 ORTHO05D004026 8.7e-105 385.6 663 69.8
A02p01970 Brassica napus HOM05D003406 ORTHO05D004026 9.6e-104 382.1 669 68.8
ATR0745G072 Amborella trichopoda HOM05D003406 ORTHO05D004026 3.6e-103 380.2 686 65.7
BolC2t06560H Brassica oleracea HOM05D003406 ORTHO05D004026 4.8e-103 379.8 666 69.5
BcaNung01149 Brassica carinata HOM05D003406 ORTHO05D004026 1.8e-102 377.9 666 69.4
Sabra03G0147300 Salix brachista HOM05D003406 ORTHO05D004026 3.4e-101 373.6 680 66.5
BcaNung01887 Brassica carinata HOM05D003406 ORTHO05D004026 5.8e-101 372.9 663 69.4
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 1.3e-100 371.7 619 71.9
Lj3g0018542 Lotus japonicus HOM05D003406 ORTHO05D004026 4.3e-96 356.7 602 68.6
MBI02_g23406_MAGBIO Magnolia biondii HOM05D003406 ORTHO05D004026 2.2e-84 317.8 376 53.7
CDE04G3459 Ceratophyllum demersum HOM05D003406 ORTHO05D004026 5.1e-81 306.6 375 52.8
Hma1.2p1_1396F.1_g280640 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 3.7e-79 300.4 366 77.6
AUR62037192 Chenopodium quinoa HOM05D003406 ORTHO05D004026 1.1e-75 288.9 337 51.9
Mapoly0029s0111 Marchantia polymorpha HOM05D003406 ORTHO05D004026 1.9e-72 278.1 684 60.4
DCAR_031833 Daucus carota HOM05D003406 ORTHO05D004026 5.7e-72 276.6 280 61.4
unitig_26.g9605 Utricularia gibba HOM05D003406 ORTHO05D004026 1.3e-71 275.4 430 46.0
PSO782G3285 Papaver somniferum HOM05D003406 ORTHO05D004026 4.1e-70 270.4 532 55.5
RcHm_v2.0_Chr5g0010661 Rosa chinensis HOM05D003406 ORTHO05D004026 4.5e-69 266.9 449 76.2
SMO353G0072 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 4.5e-69 266.9 423 78.3
TPR.G36971 Trifolium pratense HOM05D003406 ORTHO05D004026 1.3e-68 265.4 421 46.6
DCAR_031832 Daucus carota HOM05D003406 ORTHO05D004026 1.4e-65 255.4 153 84.3
CARHR199960 Cardamine hirsuta HOM05D003406 ORTHO05D004026 6.7e-65 253.1 347 51.3
SHI03990 Sapria himalayana HOM05D003406 ORTHO05D004026 5.9e-61 240.0 363 43.0
FAN19G0629 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.1e-58 231.5 432 74.5
FAN28G2604 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.7e-58 230.3 436 74.1
Pp3c16_16500 Physcomitrium patens HOM05D003406 ORTHO05D004026 1.0e-57 229.2 670 59.6
FAN26G1924 Fragaria x ananassa HOM05D003406 ORTHO05D004026 2.0e-56 224.9 423 69.5
Ah.10g030390 Amaranthus hybridus HOM05D003406 ORTHO05D004026 7.4e-56 223.0 149 74.5
CBR_g22487 Chara braunii HOM05D003406 ORTHO05D004026 3.8e-52 210.7 652 56.0
CBR_g16799 Chara braunii HOM05D003406 ORTHO05D004026 5.5e-51 206.8 666 56.6
SEGI_13935 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 2.1e-50 204.9 144 69.4
AagrBONN_evm.TU.Sc2ySwM_369.461 Anthoceros agrestis HOM05D003406 ORTHO05D004026 4.0e-49 200.7 576 38.0
Aqoxy2G01593 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 2.1e-42 178.3 383 34.2
SHI03989 Sapria himalayana HOM05D003406 ORTHO05D004026 1.7e-39 168.7 116 70.7
MCO04G412 Micromonas commoda HOM05D003406 ORTHO05D004026 5.5e-35 153.7 365 45.5
Hma1.2p1_1396F.1_g280660 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 6.1e-34 150.2 119 70.6
RcHm_v2.0_Chr3g0482981 Rosa chinensis HOM05D003406 ORTHO05D004026 1.4e-33 149.1 384 74.2
FAN23G2061 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.8e-33 148.7 136 58.1
RcHm_v2.0_Chr3g0482821 Rosa chinensis HOM05D003406 ORTHO05D004026 2.3e-33 148.3 387 73.9
RcHm_v2.0_Chr4g0404661 Rosa chinensis HOM05D003406 ORTHO05D004026 3.0e-33 147.9 435 56.1
TPR.G36904 Trifolium pratense HOM05D003406 ORTHO05D004026 6.8e-33 146.7 78 87.2
Os01g0951000 Oryza sativa ssp. japonica HOM05D003406 ORTHO05D004026 1.5e-32 145.6 97 73.2
ATR0568G096 Amborella trichopoda HOM05D003406 ORTHO05D004026 2.6e-32 144.8 277 37.9
TPR.G24634 Trifolium pratense HOM05D003406 ORTHO05D004026 4.4e-32 144.1 79 84.8
PGSC0003DMG400023151 Solanum tuberosum HOM05D003406 ORTHO05D004026 5.7e-32 143.7 278 45.0
FAN14G5538 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.2e-29 136.0 134 51.5
FvH4_6g22190 Fragaria vesca HOM05D003406 ORTHO05D004026 3.5e-29 134.4 134 50.7
PSO561G0005 Papaver somniferum HOM05D003406 ORTHO05D004026 4.5e-29 134.0 196 48.5
FAN13G0969 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.0e-28 132.9 133 48.9
PSO782G3453 Papaver somniferum HOM05D003406 ORTHO05D004026 2.3e-28 131.7 261 41.0
RcHm_v2.0_Chr3g0486211 Rosa chinensis HOM05D003406 ORTHO05D004026 3.8e-28 131.0 141 50.4
FAN09G0535 Fragaria x ananassa HOM05D003406 ORTHO05D004026 8.6e-28 129.8 134 48.5
FAN18G4486 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.3e-27 127.5 134 47.8
FvH4_5g25490 Fragaria vesca HOM05D003406 ORTHO05D004026 2.1e-26 125.2 134 47.0
FvH4_5g25550 Fragaria vesca HOM05D003406 ORTHO05D004026 2.1e-26 125.2 134 47.0
SEGI_30282 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 2.2e-23 115.2 88 58.0
Cre06.g251951 Chlamydomonas reinhardtii HOM05D003406 ORTHO05D004026 1.8e-22 112.1 393 31.6
PRCOL_00004312 Prasinoderma coloniale HOM05D003406 ORTHO05D004026 7.0e-22 110.2 364 43.4
SEGI_28183 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 2.7e-21 108.2 127 55.1
SMO231G0014 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 1.1e-19 102.8 87 56.3
Actinidia10171 Actinidia chinensis HOM05D003406 ORTHO05D004026 4.7e-18 97.4 111 55.0
SEGI_34701 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 4.7e-18 97.4 53 71.7
SEGI_28398 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.4e-17 95.9 62 71.0
BcaC05g28071 Brassica carinata HOM05D003406 ORTHO05D004026 2.3e-17 95.1 56 82.1
Haze_26561 Corylus avellana HOM05D003406 ORTHO05D004026 4.0e-17 94.4 77 54.5
Actinidia13019 Actinidia chinensis HOM05D003406 ORTHO05D004026 6.8e-17 93.6 171 45.6
Aqoxy2G01592 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 8.9e-17 93.2 133 50.4
C07p49630 Brassica napus HOM05D003406 ORTHO05D004026 3.7e-15 87.8 92 54.3
C03p43350 Brassica napus HOM05D003406 ORTHO05D004026 3.2e-14 84.7 47 87.2
BolC3t16605H Brassica oleracea HOM05D003406 ORTHO05D004026 3.2e-14 84.7 47 87.2
TPR.G20465 Trifolium pratense HOM05D003406 ORTHO05D004026 7.0e-14 83.6 54 79.6
AUR62037193 Chenopodium quinoa HOM05D003406 ORTHO05D015410 7.8e-13 80.1 166 31.3
Actinidia19465 Actinidia chinensis HOM05D003406 ORTHO05D004026 1.3e-12 79.3 216 40.3
SEGI_35311 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.7e-12 79.0 340 31.5
FAN06G0645 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
FAN09G3514 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
FAN11G1841 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
FAN16G0070 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
FAN16G0123 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
FAN23G2758 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
FAN27G1752 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.9e-12 77.8 54 59.3
Actinidia10170 Actinidia chinensis HOM05D003406 ORTHO05D004026 8.6e-12 76.6 67 65.7
FAN19G1643 Fragaria x ananassa HOM05D003406 ORTHO05D004026 8.6e-12 76.6 54 57.4
FAN11G4032 Fragaria x ananassa HOM05D003406 ORTHO05D004026 5.6e-11 73.9 80 58.8
FAN14G3483 Fragaria x ananassa HOM05D003406 ORTHO05D004026 3.6e-10 71.2 80 57.5
Gohir.D10G058700 Gossypium hirsutum HOM05D003406 ORTHO05D004026 8.1e-10 70.1 52 71.2
Gorai.011G062800 Gossypium raimondii HOM05D003406 ORTHO05D004026 2.3e-09 68.6 52 69.2
arahy.Tifrunner.gnm1.ann1.JYS69T Arachis hypogaea HOM05D003406 ORTHO05D004026 5.8e-08 63.9 66 59.1
C05p40950 Brassica napus HOM05D003406 ORTHO05D004026 7.5e-08 63.5 39 74.4
FAN19G2649 Fragaria x ananassa HOM05D003406 ORTHO05D004026 8.3e-07 60.1 35 68.6
Aa31LG8G12390 Aethionema arabicum HOM05D003406 ORTHO05D030983 3.2e-06 58.2 77 39.0


User provided reference genes

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