Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 1.4e-159 566.2 281 100.0
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 3.2e-124 448.7 247 91.9
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.6e-112 409.8 251 81.7
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 1.8e-111 406.4 251 80.9
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 6.9e-111 404.4 250 81.2
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.3e-109 400.2 252 79.4
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 1.9e-108 396.4 250 77.6
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 6.1e-107 391.3 264 76.1
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 1.3e-106 390.2 246 78.5
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 3.0e-106 389.0 251 78.5
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 2.5e-105 386.0 242 78.5
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 3.3e-105 385.6 247 78.1
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 7.4e-105 384.4 247 77.3
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 1.6e-104 383.3 235 80.4
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 3.7e-104 382.1 245 78.0
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 6.3e-104 381.3 254 77.6
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 1.1e-103 380.6 238 79.4
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 1.8e-103 379.8 247 76.9
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 1.8e-103 379.8 253 75.9
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 4.1e-103 378.6 247 75.7
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 5.3e-103 378.3 247 76.5
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 6.9e-103 377.9 248 76.2
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 9.1e-103 377.5 244 76.6
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 2.6e-102 375.9 219 82.2
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.5e-102 375.2 247 76.9
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 5.9e-102 374.8 243 77.4
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 5.9e-102 374.8 243 77.4
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 5.9e-102 374.8 246 77.2
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 5.9e-102 374.8 251 76.1
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 7.7e-102 374.4 233 79.0
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 7.7e-102 374.4 247 76.5
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 2.2e-101 372.9 225 82.7
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 5.0e-101 371.7 239 77.8
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 5.0e-101 371.7 252 75.0
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 8.5e-101 370.9 253 75.5
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 8.5e-101 370.9 236 78.0
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 8.5e-101 370.9 230 80.0
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.1e-100 370.5 245 80.0
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 1.4e-100 370.2 247 76.1
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 1.9e-100 369.8 238 76.9
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 1.9e-100 369.8 227 79.7
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.9e-100 369.8 252 74.6
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 2.5e-100 369.4 246 76.4
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 3.2e-100 369.0 257 74.3
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 3.2e-100 369.0 219 81.3
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 4.2e-100 368.6 240 75.8
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 4.2e-100 368.6 248 75.8
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.5e-100 368.2 252 75.0
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 5.5e-100 368.2 240 77.5
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 5.5e-100 368.2 247 75.7
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 5.5e-100 368.2 247 75.3
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 9.4e-100 367.5 246 74.4
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 1.6e-99 366.7 252 72.6
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 1.6e-99 366.7 249 74.3
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 2.7e-99 365.9 243 76.1
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 2.7e-99 365.9 247 74.9
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.0e-98 364.0 224 79.9
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 3.9e-98 362.1 245 73.1
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 5.1e-98 361.7 251 74.5
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 8.8e-98 360.9 251 74.9
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 1.1e-97 360.5 248 73.4
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 1.1e-97 360.5 243 74.9
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 2.6e-97 359.4 245 73.5
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.6e-97 359.4 251 74.1
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 4.4e-97 358.6 249 73.5
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 5.7e-97 358.2 267 70.0
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 5.7e-97 358.2 248 71.4
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 9.7e-97 357.5 223 78.5
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 3.1e-95 352.4 227 74.9
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 4.1e-95 352.1 249 74.3
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 4.1e-95 352.1 216 80.1
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 1.2e-94 350.5 251 72.1
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 2.5e-92 342.8 242 73.1
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 5.5e-92 341.7 251 68.9
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 9.4e-92 340.9 255 71.0
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 4.7e-91 338.6 207 81.6
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 2.0e-89 333.2 247 67.2
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.7e-88 330.1 246 69.1
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 3.7e-88 328.9 247 68.0
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.2e-86 323.9 246 67.5
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.6e-86 323.6 195 82.6
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.6e-86 322.8 246 67.5
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 7.7e-86 321.2 246 66.7
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 7.7e-86 321.2 246 67.5
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.9e-84 316.6 236 67.8
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 3.2e-84 315.8 246 66.3
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 4.2e-84 315.5 238 66.8
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 1.6e-83 313.5 248 65.3
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 2.1e-83 313.2 239 66.5
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 4.7e-83 312.0 238 66.8
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 6.1e-83 311.6 238 66.8
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 5.7e-81 305.1 237 66.2
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 3.7e-80 302.4 239 65.3
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 1.4e-79 300.4 238 65.5
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 1.2e-78 297.4 238 64.7
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 2.0e-78 296.6 239 64.0
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 4.5e-78 295.4 238 64.7
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 1.9e-76 290.0 248 62.5
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 4.0e-74 282.3 166 83.1
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 4.4e-73 278.9 275 56.0
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 1.3e-72 277.3 171 79.5
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 2.0e-70 270.0 165 80.6
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 2.7e-70 269.6 172 77.9
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.5e-70 269.2 171 77.8
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 1.5e-68 263.8 177 74.0
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.6e-65 253.1 163 76.1
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 2.6e-65 253.1 163 79.8
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 1.8e-63 246.9 217 62.2
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 2.9e-61 239.6 202 61.4
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 6.6e-61 238.4 213 58.7
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 1.2e-57 227.6 189 59.8
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 8.6e-53 211.5 164 68.3
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 1.1e-44 184.5 249 45.8
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 8.3e-40 168.3 103 78.6
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 4.7e-35 152.5 88 84.1
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 5.8e-33 145.6 93 76.3
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 1.3e-32 144.4 215 44.2
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 1.7e-32 144.1 185 50.3
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 2.2e-32 143.7 88 80.7
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 2.3e-29 133.7 80 77.5
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.1e-27 127.1 74 81.1
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 1.9e-23 114.0 85 63.5
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.5e-20 104.4 200 40.5
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 7.3e-20 102.1 84 63.1
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.8e-19 99.4 58 79.3
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.0e-18 96.3 138 43.5
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 3.4e-17 93.2 130 40.0
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 6.4e-16 89.0 57 70.2
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 4.2e-15 86.3 58 65.5
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 9.3e-15 85.1 230 34.8
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 6.0e-14 82.4 61 67.2
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 2.4e-10 70.5 64 56.2
Cfa023417 Carpinus fangiana HOM05D005962 ORTHO05D123568 3.5e-06 56.6 135 32.6
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 6.0e-06 55.8 45 60.0
GSVIVG01016925001 Vitis vinifera HOM05D000106 ORTHO05D000160 7.9e-06 55.5 40 60.0


User provided reference genes

Program Settings