Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G3893 Erigeron canadensis HOM05D005783 ORTHO05D007042 1.5e-46 189.1 93 100.0
Manes.13G035400 Manihot esculenta HOM05D005783 ORTHO05D007042 1.2e-27 126.3 61 98.4
Phvul.001G162100 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 1.6e-27 125.9 62 95.2
Lj1g0019785 Lotus japonicus HOM05D005783 ORTHO05D007042 2.1e-27 125.6 61 96.7
Actinidia09533 Actinidia chinensis HOM05D000063 ORTHO05D002147 2.7e-27 125.2 62 95.2
CsaV3_3G022140 Cucumis sativus L. HOM05D005783 ORTHO05D007042 2.7e-27 125.2 61 96.7
Lalb_Chr12g0200071 Lupinus albus HOM05D005783 ORTHO05D007042 2.7e-27 125.2 61 96.7
Manes.13G035600 Manihot esculenta HOM05D005783 ORTHO05D007042 2.7e-27 125.2 61 96.7
Nn3g19695 Nelumbo nucifera HOM05D005783 ORTHO05D007042 2.7e-27 125.2 62 95.2
TWI12G1387 Tripterygium wilfordii HOM05D005783 ORTHO05D007042 2.7e-27 125.2 61 96.7
Lsat_1_v5_gn_9_10421 Lactuca sativa HOM05D005783 ORTHO05D007042 3.5e-27 124.8 61 96.7
HanXRQChr09g0254261 Helianthus annuus HOM05D005783 ORTHO05D007042 4.6e-27 124.4 61 96.7
MELO3C012871.2 Cucumis melo HOM05D005783 ORTHO05D007042 6.0e-27 124.0 61 95.1
Duzib160G0066 Durio zibethinus HOM05D005783 ORTHO05D007042 6.0e-27 124.0 62 93.5
Eucgr.A00909 Eucalyptus grandis HOM05D005783 ORTHO05D007042 6.0e-27 124.0 61 95.1
Lalb_Chr13g0299521 Lupinus albus HOM05D005783 ORTHO05D007042 6.0e-27 124.0 61 95.1
PGR031G0633 Punica granatum HOM05D005783 ORTHO05D007042 6.0e-27 124.0 62 95.2
TWI18G0071 Tripterygium wilfordii HOM05D005783 ORTHO05D007042 6.0e-27 124.0 61 95.1
CAN.G1366.15 Capsicum annuum HOM05D005783 ORTHO05D007042 7.8e-27 123.6 61 95.1
CAN.G812.22 Capsicum annuum HOM05D005783 ORTHO05D007042 7.8e-27 123.6 61 95.1
Nitab4.5_0000326g0120 Nicotiana tabacum HOM05D005783 ORTHO05D007042 7.8e-27 123.6 61 95.1
Nitab4.5_0005593g0040 Nicotiana tabacum HOM05D005783 ORTHO05D007042 7.8e-27 123.6 61 95.1
TWI75G0260 Tripterygium wilfordii HOM05D005783 ORTHO05D007042 1.0e-26 123.2 61 95.1
TAR633G0770 Trochodendron aralioides HOM05D005783 ORTHO05D007042 1.0e-26 123.2 61 95.1
arahy.Tifrunner.gnm1.ann1.3WZ992 Arachis hypogaea HOM05D005783 ORTHO05D007042 1.3e-26 122.9 61 93.4
arahy.Tifrunner.gnm1.ann1.EB1FDX Arachis hypogaea HOM05D005783 ORTHO05D007042 1.3e-26 122.9 61 93.4
arahy.Tifrunner.gnm1.ann1.P2X2DJ Arachis hypogaea HOM05D005783 ORTHO05D007042 1.3e-26 122.9 61 93.4
arahy.Tifrunner.gnm1.ann1.R5MBR2 Arachis hypogaea HOM05D005783 ORTHO05D007042 1.3e-26 122.9 61 93.4
Phvul.007G033301 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 1.3e-26 122.9 62 93.5
Phvul.008G022975 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 1.3e-26 122.9 62 93.5
Hund09610 Selenicereus undatus HOM05D005783 ORTHO05D007042 1.3e-26 122.9 61 93.4
Thecc.06G145600 Theobroma cacao HOM05D005783 ORTHO05D007042 1.3e-26 122.9 61 93.4
Glyma.03G164500 Glycine max HOM05D005783 ORTHO05D007042 1.7e-26 122.5 61 93.4
Lalb_Chr07g0181091 Lupinus albus HOM05D005783 ORTHO05D007042 1.7e-26 122.5 61 93.4
Nitab4.5_0006107g0020 Nicotiana tabacum HOM05D005783 ORTHO05D007042 1.7e-26 122.5 61 93.4
Nitab4.5_0007062g0060 Nicotiana tabacum HOM05D005783 ORTHO05D007042 1.7e-26 122.5 61 93.4
Rhsim01G0263700 Rhododendron simsii HOM05D005783 ORTHO05D007042 1.7e-26 122.5 61 95.1
CiPaw.04G187800 Carya illinoinensis HOM05D005783 ORTHO05D007042 2.3e-26 122.1 61 95.1
Solyc09g066500.4 Solanum lycopersicum HOM05D005783 ORTHO05D007042 2.3e-26 122.1 60 96.7
PGSC0003DMG400010293 Solanum tuberosum HOM05D005783 ORTHO05D007042 2.3e-26 122.1 60 96.7
FvH4_2g21220 Fragaria vesca HOM05D005783 ORTHO05D007042 3.0e-26 121.7 62 93.5
FAN20G2131 Fragaria x ananassa HOM05D005783 ORTHO05D007042 3.0e-26 121.7 62 93.5
Gorai.010G167900 Gossypium raimondii HOM05D005783 ORTHO05D007042 3.0e-26 121.7 61 91.8
RcHm_v2.0_Chr6g0287721 Rosa chinensis HOM05D005783 ORTHO05D007042 3.0e-26 121.7 62 93.5
Migut.N02211 Erythranthe guttata HOM05D005783 ORTHO05D007042 3.9e-26 121.3 61 93.4
Gohir.A10G043300 Gossypium hirsutum HOM05D005783 ORTHO05D007042 3.9e-26 121.3 62 93.5
Gohir.D06G144100 Gossypium hirsutum HOM05D005783 ORTHO05D007042 3.9e-26 121.3 61 91.8
Gohir.D10G044500 Gossypium hirsutum HOM05D005783 ORTHO05D007042 3.9e-26 121.3 62 93.5
Gorai.011G047500 Gossypium raimondii HOM05D005783 ORTHO05D007042 3.9e-26 121.3 62 93.5
Lsat_1_v5_gn_5_182900 Lactuca sativa HOM05D005783 ORTHO05D007042 3.9e-26 121.3 60 95.0
Lj4g0020381 Lotus japonicus HOM05D005783 ORTHO05D007042 3.9e-26 121.3 61 93.4
Aqoxy3G02728 Aquilegia oxysepala HOM05D005783 ORTHO05D007042 5.1e-26 120.9 60 95.0
Glyma.19G165900 Glycine max HOM05D005783 ORTHO05D007042 5.1e-26 120.9 61 91.8
Duzib235G0343 Durio zibethinus HOM05D005783 ORTHO05D007042 6.6e-26 120.6 61 91.8
Peaxi162Scf00624g00036 Petunia axillaris HOM05D005783 ORTHO05D007042 6.6e-26 120.6 61 93.4
Potri.002G036500 Populus trichocarpa HOM05D005783 ORTHO05D007042 6.6e-26 120.6 62 91.9
Hund02922 Selenicereus undatus HOM05D005783 ORTHO05D007042 6.6e-26 120.6 61 93.4
CDE03G0454 Ceratophyllum demersum HOM05D005783 ORTHO05D007042 8.6e-26 120.2 62 91.9
Ciclev10023246m.g Citrus clementina HOM05D005783 ORTHO05D007042 8.6e-26 120.2 61 90.2
PGSC0003DMG400025503 Solanum tuberosum HOM05D005783 ORTHO05D007042 8.6e-26 120.2 61 91.8
EL10As5g23481 Beta vulgaris HOM05D005783 ORTHO05D007042 1.1e-25 119.8 61 91.8
CSS0015227 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 1.1e-25 119.8 60 93.3
GSVIVG01033693001 Vitis vinifera HOM05D005783 ORTHO05D007042 1.1e-25 119.8 61 91.8
CSS0031432 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 1.5e-25 119.4 61 90.2
COL.COLO4_31022 Corchorus olitorius HOM05D005783 ORTHO05D007042 1.5e-25 119.4 62 90.3
Sed0003492 Sechium edule HOM05D005783 ORTHO05D007042 1.5e-25 119.4 60 93.3
HPP92_023430 Vanilla planifolia HOM05D005783 ORTHO05D007042 1.5e-25 119.4 61 90.2
CANSAT01G1988 Cannabis sativa HOM05D005783 ORTHO05D007042 2.5e-25 118.6 61 93.4
Atru.chr5.1729 Acer truncatum HOM05D005783 ORTHO05D007042 3.3e-25 118.2 60 91.7
Sed0004262 Sechium edule HOM05D005783 ORTHO05D007042 4.3e-25 117.9 60 91.7
Atru.chr12.1356 Acer truncatum HOM05D005783 ORTHO05D007042 5.6e-25 117.5 67 82.1
Potri.005G226300 Populus trichocarpa HOM05D005783 ORTHO05D007042 5.6e-25 117.5 62 88.7
THA.LOC104814520 Tarenaya hassleriana HOM05D005783 ORTHO05D007042 5.6e-25 117.5 60 91.7
MD05G1194800 Malus domestica HOM05D005783 ORTHO05D007042 7.3e-25 117.1 62 90.3
Medtr7g097110 Medicago truncatula HOM05D005783 ORTHO05D007042 1.2e-24 116.3 60 91.7
THA.LOC104804047 Tarenaya hassleriana HOM05D005783 ORTHO05D007042 1.2e-24 116.3 60 91.7
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.6e-24 115.9 62 87.1
Cc08_g00200 Coffea canephora HOM05D005783 ORTHO05D007042 1.6e-24 115.9 61 88.5
ClCG07G001140 Citrullus lanatus HOM05D005783 ORTHO05D007042 3.6e-24 114.8 58 91.4
MD10G1181400 Malus domestica HOM05D005783 ORTHO05D007042 3.6e-24 114.8 62 87.1
Prupe.8G221500 Prunus persica HOM05D005783 ORTHO05D007042 6.2e-24 114.0 62 87.1
Cfa013045 Carpinus fangiana HOM05D005783 ORTHO05D007042 1.1e-23 113.2 60 88.3
PSO210G0272 Papaver somniferum HOM05D005783 ORTHO05D007042 1.1e-23 113.2 60 86.7
PSO210G6011 Papaver somniferum HOM05D005783 ORTHO05D007042 1.1e-23 113.2 60 86.7
PSO386G0180 Papaver somniferum HOM05D005783 ORTHO05D007042 1.1e-23 113.2 60 86.7
PSO386G0258 Papaver somniferum HOM05D005783 ORTHO05D007042 1.1e-23 113.2 60 86.7
AL3G53490 Arabidopsis lyrata HOM05D005783 ORTHO05D007042 1.4e-23 112.8 62 85.5
AT2G20490 Arabidopsis thaliana HOM05D005783 ORTHO05D007042 1.8e-23 112.5 62 85.5
Gohir.A06G139500 Gossypium hirsutum HOM05D005783 ORTHO05D007042 1.8e-23 112.5 61 86.9
MBI07_g16905_MAGBIO Magnolia biondii HOM05D005783 ORTHO05D007042 1.8e-23 112.5 57 91.2
Os02g0618250 Oryza sativa ssp. japonica HOM05D005783 ORTHO05D007042 1.8e-23 112.5 60 86.7
Medtr8g069770 Medicago truncatula HOM05D005783 ORTHO05D007042 3.1e-23 111.7 61 86.9
Carub.0003s3493 Capsella rubella HOM05D005783 ORTHO05D007042 4.0e-23 111.3 62 83.9
CARHR111040 Cardamine hirsuta HOM05D005783 ORTHO05D007042 4.0e-23 111.3 62 83.9
Sp3g33690 Schrenkiella parvula HOM05D005783 ORTHO05D007042 6.8e-23 110.5 62 83.9
A07p00260 Brassica napus HOM05D005783 ORTHO05D007042 2.0e-22 109.0 62 82.3
BraA07t27818Z Brassica rapa HOM05D005783 ORTHO05D007042 2.0e-22 109.0 62 82.3
FAN15G2862 Fragaria x ananassa HOM05D005783 ORTHO05D007042 2.0e-22 109.0 84 69.0
Thhalv10002146m.g Eutrema salsugineum HOM05D005783 ORTHO05D007042 3.4e-22 108.2 62 80.6
SalBow6G4406 Salvia bowleyana HOM05D005783 ORTHO05D007042 3.4e-22 108.2 83 66.3
unitig_60.g25746 Utricularia gibba HOM05D005783 ORTHO05D007042 3.4e-22 108.2 78 73.1
BcaC07g41214 Brassica carinata HOM05D005783 ORTHO05D007042 5.8e-22 107.5 62 80.6
A09p58870 Brassica napus HOM05D005783 ORTHO05D007042 5.8e-22 107.5 62 80.6
C08p42200 Brassica napus HOM05D005783 ORTHO05D007042 5.8e-22 107.5 62 80.6
BolC8t51779H Brassica oleracea HOM05D005783 ORTHO05D007042 5.8e-22 107.5 62 80.6
BraA09t41273Z Brassica rapa HOM05D005783 ORTHO05D007042 5.8e-22 107.5 62 80.6
BcaC06g36737 Brassica carinata HOM05D005783 ORTHO05D007042 9.9e-22 106.7 62 80.6
C07p00540 Brassica napus HOM05D005783 ORTHO05D007042 9.9e-22 106.7 62 80.6
Haze_21406 Corylus avellana HOM05D005783 ORTHO05D007042 1.7e-21 105.9 78 70.5
BcaB03g16843 Brassica carinata HOM05D005783 ORTHO05D007042 2.9e-21 105.1 62 79.0
BcaB08g34911 Brassica carinata HOM05D005783 ORTHO05D007042 3.7e-21 104.8 62 79.0
BcaC04g22786 Brassica carinata HOM05D005783 ORTHO05D007042 3.7e-21 104.8 62 79.0
A09p12910 Brassica napus HOM05D005783 ORTHO05D007042 3.7e-21 104.8 62 79.0
C09p15300 Brassica napus HOM05D005783 ORTHO05D007042 3.7e-21 104.8 62 79.0
BraA09t36936Z Brassica rapa HOM05D005783 ORTHO05D007042 3.7e-21 104.8 62 79.0
FAN27G1156 Fragaria x ananassa HOM05D005783 ORTHO05D007042 4.9e-21 104.4 96 60.4
SEGI_26494 Sequoiadendron giganteum HOM05D005783 ORTHO05D007042 4.9e-21 104.4 60 81.7
Pp3c19_4700 Physcomitrium patens HOM05D005783 ORTHO05D007042 1.1e-20 103.2 61 77.0
SMO133G0019 Selaginella moellendorffii HOM05D005783 ORTHO05D007042 2.4e-20 102.1 61 73.8
Mapoly0081s0079 Marchantia polymorpha HOM05D005783 ORTHO05D007042 7.1e-20 100.5 60 75.0
BolC7t40500H Brassica oleracea HOM05D005783 ORTHO05D007042 1.3e-18 96.3 75 65.3
MCO03G241 Micromonas commoda HOM05D005783 ORTHO05D007042 1.7e-18 95.9 60 71.7
SalBow6G1359 Salvia bowleyana HOM05D005783 ORTHO05D007042 1.5e-17 92.8 112 49.1
Cre05.g237700 Chlamydomonas reinhardtii HOM05D005783 ORTHO05D007042 9.6e-17 90.1 61 65.6
BolC9t54438H Brassica oleracea HOM05D005783 ORTHO05D007042 1.2e-16 89.7 90 54.4
PRCOL_00002782 Prasinoderma coloniale HOM05D005783 ORTHO05D007042 3.6e-16 88.2 59 67.8
Phvul.011G076600 Phaseolus vulgaris HOM05D005783 ORTHO05D007042 1.4e-15 86.3 44 93.2
HanXRQChr10g0280801 Helianthus annuus HOM05D005783 ORTHO05D007042 5.2e-15 84.3 42 95.2
MELO3C033129.2 Cucumis melo HOM05D005783 ORTHO05D007042 3.4e-14 81.6 55 76.4
Sabra05G0174700 Salix brachista HOM05D005783 ORTHO05D007042 4.4e-14 81.3 45 84.4
Duzib192G0414 Durio zibethinus HOM05D005783 ORTHO05D007042 5.4e-12 74.3 89 52.8
CAN.G304.1 Capsicum annuum HOM05D005783 ORTHO05D007042 1.0e-10 70.1 55 61.8
unitig_0.g159 Utricularia gibba HOM05D005783 ORTHO05D007042 1.7e-10 69.3 48 66.7
BcaC03g16291 Brassica carinata HOM05D005783 ORTHO05D007042 2.1e-08 62.4 44 68.2
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 3.6e-08 61.6 29 96.6
CSS0019928 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 8.1e-08 60.5 63 50.8
CSS0014186 Camellia sinensis var. sinensis HOM05D005783 ORTHO05D007042 2.4e-07 58.9 58 55.2
FAN24G2571 Fragaria x ananassa HOM05D005783 ORTHO05D007042 4.0e-07 58.2 30 90.0


User provided reference genes

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