Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2912 Erigeron canadensis HOM05D005705 ORTHO05D007152 6.4e-221 770.4 372 100.0
ECA247G0704 Erigeron canadensis HOM05D005705 ORTHO05D007152 3.4e-198 694.9 377 90.5
HanXRQChr02g0034161 Helianthus annuus HOM05D005705 ORTHO05D007152 3.1e-183 645.2 378 84.9
Lsat_1_v5_gn_1_32681 Lactuca sativa HOM05D005705 ORTHO05D007152 1.3e-181 639.8 377 84.9
Dinv11204 Davidia involucrata HOM05D005705 ORTHO05D007152 6.1e-155 551.2 379 73.1
Solyc03g097550.3 Solanum lycopersicum HOM05D005705 ORTHO05D007152 1.4e-151 540.0 377 70.8
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 1.8e-151 539.7 382 70.2
Sopen03g028300 Solanum pennellii HOM05D005705 ORTHO05D007152 2.4e-151 539.3 377 70.6
Migut.D01284 Erythranthe guttata HOM05D005705 ORTHO05D007152 1.0e-149 533.9 377 71.6
CAN.G732.1 Capsicum annuum HOM05D005705 ORTHO05D007152 1.4e-148 530.0 378 68.8
Nitab4.5_0003383g0010 Nicotiana tabacum HOM05D005705 ORTHO05D007152 3.2e-148 528.9 381 69.3
Peaxi162Scf00516g00214 Petunia axillaris HOM05D005705 ORTHO05D007152 3.2e-148 528.9 384 69.8
CANSAT80G2532 Cannabis sativa HOM05D005705 ORTHO05D007152 1.0e-146 523.9 378 69.3
Cc08_g11650 Coffea canephora HOM05D005705 ORTHO05D007152 2.3e-146 522.7 379 68.9
Aqoxy3G01676 Aquilegia oxysepala HOM05D005705 ORTHO05D007152 1.5e-145 520.0 375 69.3
Nn4g22220 Nelumbo nucifera HOM05D005705 ORTHO05D007152 5.7e-145 518.1 380 69.5
DCAR_026236 Daucus carota HOM05D005705 ORTHO05D007152 9.7e-145 517.3 375 69.6
GSVIVG01008591001 Vitis vinifera HOM05D005705 ORTHO05D007152 1.7e-144 516.5 384 68.2
Manes.06G123000 Manihot esculenta HOM05D005705 ORTHO05D007152 2.8e-144 515.8 378 69.0
Atru.chr6.1874 Acer truncatum HOM05D005705 ORTHO05D007152 2.4e-143 512.7 377 67.4
CiPaw.11G003500 Carya illinoinensis HOM05D005705 ORTHO05D007152 5.3e-143 511.5 381 68.5
TWI14G0152 Tripterygium wilfordii HOM05D005705 ORTHO05D007152 6.9e-143 511.1 379 67.8
Sabra15G0121700 Salix brachista HOM05D005705 ORTHO05D007152 1.5e-142 510.0 377 67.6
VMungo1309G0782 Vigna mungo HOM05D005705 ORTHO05D007152 3.4e-142 508.8 376 67.8
Potri.015G101300 Populus trichocarpa HOM05D005705 ORTHO05D007152 1.3e-141 506.9 373 67.6
RcHm_v2.0_Chr7g0189351 Rosa chinensis HOM05D005705 ORTHO05D007152 1.3e-141 506.9 377 67.6
Phvul.009G162600 Phaseolus vulgaris HOM05D005705 ORTHO05D007152 1.7e-141 506.5 378 68.0
Ciclev10031733m.g Citrus clementina HOM05D005705 ORTHO05D007152 2.2e-141 506.1 376 69.1
FAN13G0195 Fragaria x ananassa HOM05D005705 ORTHO05D007152 1.1e-140 503.8 384 66.4
FAN18G0862 Fragaria x ananassa HOM05D005705 ORTHO05D007152 1.1e-140 503.8 388 65.7
Ca_16064_v3 Cicer arietinum L. HOM05D005705 ORTHO05D007152 4.2e-140 501.9 380 66.8
Gorai.003G119300 Gossypium raimondii HOM05D005705 ORTHO05D007152 4.2e-140 501.9 377 65.5
Medtr3g098940 Medicago truncatula HOM05D005705 ORTHO05D007152 7.2e-140 501.1 378 67.2
CSS0038740 Camellia sinensis var. sinensis HOM05D005705 ORTHO05D007152 1.2e-139 500.4 404 64.1
Eucgr.K02692 Eucalyptus grandis HOM05D005705 ORTHO05D007152 6.1e-139 498.0 376 67.3
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 7.9e-139 497.7 375 65.3
Gohir.D03G113100 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.3e-138 496.1 377 65.3
Lalb_Chr08g0237371 Lupinus albus HOM05D005705 ORTHO05D007152 3.9e-138 495.4 381 66.1
Glyma.06G167100 Glycine max HOM05D005705 ORTHO05D007152 5.2e-138 495.0 377 67.1
Lj1g0017194 Lotus japonicus HOM05D005705 ORTHO05D007152 6.7e-138 494.6 379 67.3
Psat5g053040 Pisum sativum HOM05D005705 ORTHO05D007152 6.7e-138 494.6 378 66.4
FAN08G2466 Fragaria x ananassa HOM05D005705 ORTHO05D007152 8.8e-138 494.2 391 64.5
CsaV3_1G000320 Cucumis sativus L. HOM05D005705 ORTHO05D007152 2.0e-137 493.0 376 66.0
ClCG06G018130 Citrullus lanatus HOM05D005705 ORTHO05D007152 4.4e-137 491.9 370 66.5
vmacro19145 Vaccinium macrocarpon HOM05D005705 ORTHO05D007152 9.7e-137 490.7 409 64.3
arahy.Tifrunner.gnm1.ann1.5ZS0BP Arachis hypogaea HOM05D005705 ORTHO05D007152 2.2e-136 489.6 386 66.3
MD14G1151500 Malus domestica HOM05D005705 ORTHO05D007152 4.8e-136 488.4 377 64.7
arahy.Tifrunner.gnm1.ann1.U15GQW Arachis hypogaea HOM05D005705 ORTHO05D007152 1.6e-134 483.4 422 60.4
Eucgr.B00082 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.6e-134 483.4 373 66.0
Thecc.03G135500 Theobroma cacao HOM05D005705 ORTHO05D007152 1.6e-134 483.4 377 64.5
PGR044G0296 Punica granatum HOM05D005705 ORTHO05D007152 1.7e-133 479.9 385 63.6
Eucgr.F01610 Eucalyptus grandis HOM05D005705 ORTHO05D007152 2.2e-133 479.6 379 65.2
Prupe.5G146600 Prunus persica HOM05D005705 ORTHO05D007152 2.9e-133 479.2 375 64.3
MD06G1136700 Malus domestica HOM05D005705 ORTHO05D007152 3.8e-133 478.8 378 64.6
Zm00001eb241970 Zea mays HOM05D005705 ORTHO05D007152 4.2e-132 475.3 373 64.1
ATR0582G303 Amborella trichopoda HOM05D005705 ORTHO05D007152 2.7e-131 472.6 389 61.7
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 1.4e-130 470.3 386 61.9
Sp6g13350 Schrenkiella parvula HOM05D005705 ORTHO05D007152 3.3e-129 465.7 374 62.6
CARHR256910 Cardamine hirsuta HOM05D005705 ORTHO05D007152 7.5e-129 464.5 374 61.5
AL8G25400 Arabidopsis lyrata HOM05D005705 ORTHO05D007152 2.2e-128 463.0 374 61.2
BcaC01g06097 Brassica carinata HOM05D005705 ORTHO05D007152 2.8e-128 462.6 375 62.7
AT5G51140 Arabidopsis thaliana HOM05D005705 ORTHO05D007152 1.8e-127 459.9 374 61.2
C03p19170 Brassica napus HOM05D005705 ORTHO05D007152 2.4e-127 459.5 375 62.1
BolC2t08194H Brassica oleracea HOM05D005705 ORTHO05D007152 3.1e-127 459.1 366 63.9
Carub.0008s1118 Capsella rubella HOM05D005705 ORTHO05D007152 4.1e-127 458.8 376 61.7
BolC3t14305H Brassica oleracea HOM05D005705 ORTHO05D007152 7.0e-127 458.0 376 62.5
A02p12470 Brassica napus HOM05D005705 ORTHO05D007152 9.1e-127 457.6 364 64.6
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 3.5e-126 455.7 378 61.6
BcaC01g06077 Brassica carinata HOM05D005705 ORTHO05D007152 4.5e-126 455.3 376 61.2
BraA02t06310Z Brassica rapa HOM05D005705 ORTHO05D007152 5.9e-126 454.9 364 64.0
Thhalv10013761m.g Eutrema salsugineum HOM05D005705 ORTHO05D007152 5.9e-126 454.9 374 61.0
C02p20570 Brassica napus HOM05D005705 ORTHO05D007152 7.7e-126 454.5 365 63.3
Eucgr.B00079 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.7e-125 453.4 361 65.4
TPR.G35256 Trifolium pratense HOM05D005705 ORTHO05D007152 2.9e-125 452.6 380 62.4
Rhsim08G0193700 Rhododendron simsii HOM05D005705 ORTHO05D007152 6.5e-125 451.4 351 68.4
PSO478G3581 Papaver somniferum HOM05D005705 ORTHO05D007152 8.5e-125 451.1 377 61.5
PSO017G1135 Papaver somniferum HOM05D005705 ORTHO05D007152 1.5e-124 450.3 381 61.9
BcaC03g14622 Brassica carinata HOM05D005705 ORTHO05D007152 4.2e-124 448.7 357 63.6
BraA03t10919Z Brassica rapa HOM05D005705 ORTHO05D007152 5.5e-124 448.4 378 60.6
QL10p001835 Quercus lobata HOM05D005705 ORTHO05D007152 2.1e-123 446.4 511 49.5
FAN04G2238 Fragaria x ananassa HOM05D005705 ORTHO05D007152 2.7e-123 446.0 425 57.4
A03p16280 Brassica napus HOM05D005705 ORTHO05D007152 1.4e-122 443.7 354 63.3
Gohir.A03G053840 Gossypium hirsutum HOM05D005705 ORTHO05D007152 1.3e-120 437.2 387 58.7
Sed0013194 Sechium edule HOM05D005705 ORTHO05D007152 3.5e-118 429.1 361 63.4
Oeu061128.1 Olea europaea HOM05D005705 ORTHO05D007152 4.5e-118 428.7 430 53.5
Actinidia18330 Actinidia chinensis HOM05D005705 ORTHO05D007152 1.0e-117 427.6 316 69.9
Lj5A92G46 Lonicera japonica HOM05D005705 ORTHO05D007152 1.3e-117 427.2 418 57.9
TAR374G1739 Trochodendron aralioides HOM05D005705 ORTHO05D007152 1.9e-116 423.3 293 75.4
Nn4g22223 Nelumbo nucifera HOM05D005705 ORTHO05D007152 1.6e-115 420.2 375 59.7
Sc22g0003610 Simmondsia chinensis HOM05D005705 ORTHO05D007152 4.7e-115 418.7 366 61.5
Eucgr.K02689 Eucalyptus grandis HOM05D005705 ORTHO05D007152 2.0e-113 413.3 368 60.3
Haze_07188 Corylus avellana HOM05D005705 ORTHO05D007152 1.1e-111 407.5 388 56.4
SGA_v2.0_scaffold37G14637 Striga asiatica HOM05D005705 ORTHO05D007152 2.4e-111 406.4 369 56.4
Eucgr.K02697 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.9e-108 396.7 391 55.8
Dinv23185 Davidia involucrata HOM05D005705 ORTHO05D007152 2.5e-108 396.4 266 75.6
Duzib084G0308 Durio zibethinus HOM05D005705 ORTHO05D007152 2.3e-106 389.8 377 54.4
HPP92_015136 Vanilla planifolia HOM05D005705 ORTHO05D007152 4.0e-106 389.0 373 54.7
PGR083G0448 Punica granatum HOM05D005705 ORTHO05D007152 6.8e-106 388.3 370 56.5
Hma1.2p1_0168F.1_g074310 Hydrangea macrophylla HOM05D005705 ORTHO05D007152 3.7e-104 382.5 354 61.3
AUR62029555 Chenopodium quinoa HOM05D005705 ORTHO05D007152 8.3e-104 381.3 373 54.2
AUR62034819 Chenopodium quinoa HOM05D005705 ORTHO05D007152 1.8e-103 380.2 373 53.9
FvH4_5g08961 Fragaria vesca HOM05D005705 ORTHO05D007152 4.1e-103 379.0 265 72.5
Pp3c10_5730 Physcomitrium patens HOM05D005705 ORTHO05D007152 2.3e-101 373.2 488 43.6
Mapoly0190s0007 Marchantia polymorpha HOM05D005705 ORTHO05D007152 3.4e-97 359.4 466 44.4
MSTRG.4614 Avicennia marina HOM05D005705 ORTHO05D007152 9.2e-95 351.3 276 66.3
MELO3C026185.2 Cucumis melo HOM05D005705 ORTHO05D007152 9.2e-95 351.3 406 51.7
Ah.11g046430 Amaranthus hybridus HOM05D005705 ORTHO05D007152 7.8e-94 348.2 422 48.6
PGSC0003DMG400031733 Solanum tuberosum HOM05D005705 ORTHO05D007152 3.9e-93 345.9 220 78.2
RcHm_v2.0_Chr7g0189401 Rosa chinensis HOM05D005705 ORTHO05D007152 8.6e-85 318.2 314 54.8
Gohir.A03G053960 Gossypium hirsutum HOM05D005705 ORTHO05D007152 5.2e-82 308.9 220 68.2
Hund10107 Selenicereus undatus HOM05D005705 ORTHO05D007152 4.4e-73 279.3 325 49.5
Cpa.g.sc4.149 Carica papaya HOM05D005705 ORTHO05D007152 9.9e-65 251.5 151 77.5
CDE02G4520 Ceratophyllum demersum HOM05D005705 ORTHO05D007152 8.4e-64 248.4 238 58.8
AagrBONN_evm.TU.Sc2ySwM_362.2453 Anthoceros agrestis HOM05D005705 ORTHO05D007152 4.0e-58 229.6 209 58.9
Cfa023901 Carpinus fangiana HOM05D005705 ORTHO05D007152 5.3e-58 229.2 410 36.1
Pp3c10_5680 Physcomitrium patens HOM05D005705 ORTHO05D007152 4.9e-56 222.6 366 39.6
Os02g0512300 Oryza sativa ssp. japonica HOM05D005705 ORTHO05D007152 5.6e-52 209.1 130 73.8
MBI11_g13060_MAGBIO Magnolia biondii HOM05D005705 ORTHO05D007152 1.6e-51 207.6 125 79.2
Gohir.D03G113075 Gossypium hirsutum HOM05D005705 ORTHO05D007152 1.4e-50 204.5 148 66.2
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 2.9e-48 196.8 407 32.2
Haze_27069 Corylus avellana HOM05D005705 ORTHO05D007152 7.1e-47 192.2 267 40.1
Cre17.g702400 Chlamydomonas reinhardtii HOM05D005705 ORTHO05D007152 2.1e-46 190.7 315 40.3
CBR_g48327 Chara braunii HOM05D005705 ORTHO05D007152 4.2e-39 166.4 183 53.0
MCO02G106 Micromonas commoda HOM05D005705 ORTHO05D007152 2.7e-30 137.1 178 42.7
Eucgr.K02687 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.6e-22 111.3 97 57.7
Cpa.g.sc4.148 Carica papaya HOM05D005705 ORTHO05D007152 2.7e-22 110.5 88 64.8
arahy.Tifrunner.gnm1.ann1.N812UT Arachis hypogaea HOM05D005705 ORTHO05D007152 7.4e-20 102.4 63 77.8
Cpa.g.sc4.145 Carica papaya HOM05D005705 ORTHO05D007152 1.7e-19 101.3 49 77.6
arahy.Tifrunner.gnm1.ann1.MH3CCF Arachis hypogaea HOM05D001440 ORTHO05D007152 3.7e-19 100.1 64 75.0
arahy.Tifrunner.gnm1.ann1.WM01PM Arachis hypogaea HOM05D001440 ORTHO05D013218 8.2e-19 99.0 64 73.4
arahy.Tifrunner.gnm1.ann1.5M4P4Y Arachis hypogaea HOM05D005705 ORTHO05D007152 1.1e-18 98.6 63 76.2
arahy.Tifrunner.gnm1.ann1.DA2DAM Arachis hypogaea HOM05D005705 ORTHO05D007152 5.9e-17 92.8 63 73.0
Pp3s46_330 Physcomitrium patens HOM05D007020 ORTHO05D008935 8.8e-13 79.0 236 28.8
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 3.3e-12 77.0 64 62.5
Glyma.20G178400 Glycine max HOM05D006791 ORTHO05D008221 1.0e-08 65.5 270 27.4
MELO3C002896.2 Cucumis melo HOM05D006791 ORTHO05D008221 1.3e-08 65.1 301 24.3
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 1.7e-08 64.7 38 68.4
EL10Ac1g02092 Beta vulgaris HOM05D007020 ORTHO05D008935 2.2e-08 64.3 287 23.0
Cpa.g.sc466.9 Carica papaya HOM05D006791 ORTHO05D008221 2.9e-08 63.9 271 25.1
MCO13G347 Micromonas commoda HOM05D005705 ORTHO05D007152 2.9e-08 63.9 325 25.8
SMO347G0025 Selaginella moellendorffii HOM05D006791 ORTHO05D008221 2.9e-08 63.9 299 23.4
Potri.002G016800 Populus trichocarpa HOM05D007020 ORTHO05D008935 3.8e-08 63.5 279 24.0
CsaV3_5G025780 Cucumis sativus L. HOM05D006791 ORTHO05D008221 5.0e-08 63.2 301 24.3
ClCG09G020610 Citrullus lanatus HOM05D006791 ORTHO05D008221 6.5e-08 62.8 303 24.4
MCO01G778 Micromonas commoda HOM05D007020 ORTHO05D008935 1.1e-07 62.0 262 24.0
ATR0661G229 Amborella trichopoda HOM05D007020 ORTHO05D008935 3.2e-07 60.5 266 25.2
CiPaw.01G274700 Carya illinoinensis HOM05D006791 ORTHO05D008221 3.2e-07 60.5 304 24.0
MCO05G046 Micromonas commoda HOM05D005705 ORTHO05D007152 3.2e-07 60.5 229 27.5
Sabra02G0013400 Salix brachista HOM05D007020 ORTHO05D008935 3.2e-07 60.5 281 24.2
Ah.11g040270 Amaranthus hybridus HOM05D007020 ORTHO05D008935 4.2e-07 60.1 276 24.3
Thecc.10G070300 Theobroma cacao HOM05D006791 ORTHO05D008221 4.2e-07 60.1 318 23.3
VMungo0720G1069 Vigna mungo HOM05D006791 ORTHO05D008221 4.2e-07 60.1 281 24.2
Hund05155 Selenicereus undatus HOM05D007020 ORTHO05D008935 5.5e-07 59.7 287 24.0
AagrBONN_evm.TU.Sc2ySwM_368.1098 Anthoceros agrestis HOM05D005705 ORTHO05D007152 9.4e-07 58.9 50 62.0
Gohir.A06G178100 Gossypium hirsutum HOM05D006791 ORTHO05D008221 9.4e-07 58.9 284 23.6
DCAR_019128 Daucus carota HOM05D006791 ORTHO05D008221 1.6e-06 58.2 276 25.0
PGR142G3028 Punica granatum HOM05D006791 ORTHO05D008221 1.6e-06 58.2 275 23.6
arahy.Tifrunner.gnm1.ann1.86UM3X Arachis hypogaea HOM05D006791 ORTHO05D008221 2.1e-06 57.8 270 25.6
Psat6g185200 Pisum sativum HOM05D006791 ORTHO05D008221 2.1e-06 57.8 283 23.3
Nn2g10715 Nelumbo nucifera HOM05D006791 ORTHO05D008221 2.7e-06 57.4 282 23.8
Phvul.007G093000 Phaseolus vulgaris HOM05D006791 ORTHO05D008221 2.7e-06 57.4 269 24.9
TWI15G0354 Tripterygium wilfordii HOM05D006791 ORTHO05D008221 2.7e-06 57.4 253 26.9
GSVIVG01016310001 Vitis vinifera HOM05D006791 ORTHO05D008221 2.7e-06 57.4 272 25.7
CDE09G0276 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 3.6e-06 57.0 252 26.2
unitig_747.g21478 Utricularia gibba HOM05D006791 ORTHO05D008221 3.6e-06 57.0 260 25.0
Actinidia03042 Actinidia chinensis HOM05D006791 ORTHO05D008221 4.7e-06 56.6 275 23.6
CSS0037701 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 4.7e-06 56.6 241 25.7
Gorai.010G204900 Gossypium raimondii HOM05D006791 ORTHO05D008221 4.7e-06 56.6 284 23.2
PRCOL_00002894 Prasinoderma coloniale HOM05D006623 ORTHO05D008102 4.7e-06 56.6 176 31.8
TPR.G1805 Trifolium pratense HOM05D006791 ORTHO05D008221 4.7e-06 56.6 270 24.4
RcHm_v2.0_Chr1g0363851 Rosa chinensis HOM05D006791 ORTHO05D008221 6.1e-06 56.2 287 24.7
Ca_10581_v3 Cicer arietinum L. HOM05D006791 ORTHO05D008221 8.0e-06 55.8 270 24.4
Duzib106G0039 Durio zibethinus HOM05D006791 ORTHO05D008221 8.0e-06 55.8 247 25.5
QL08p056563 Quercus lobata HOM05D006791 ORTHO05D008221 8.0e-06 55.8 265 23.8


User provided reference genes

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