Gene: Sopen03g028300

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g028300
  • Transcript Identifier Sopen03g028300.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 63928443-63936348 : positive

Gene Family Information

  • ID HOM05D005705
  • #Genes/#Species 136/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g028300.1

Descriptions

  • Description Pseudouridine synthase family protein | FUNCTIONS IN: pseudouridine synthase activity | INVOLVED IN: pseudouridine synthesis, RNA modification | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD , Pseudouridine synthase, catalytic domain , Pseudouridine synthase, RsuA and RluB/C/D/E/F , Pseudouridine synthase, RluC/RluD, conserved site , RNA-binding S4 | BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006145 Pseudouridine synthase, RsuA/RluA-like
IPR006225 Pseudouridine synthase, RluC/RluD
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
16.5.3.4 RNA processing.RNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA)