Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 3.4e-225 784.6 384 100.0
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 1.4e-175 619.8 384 78.6
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 1.2e-158 563.5 370 76.5
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 3.1e-154 548.9 391 66.8
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.3e-149 533.5 388 66.0
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 4.3e-148 528.5 382 65.4
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.3e-147 526.9 385 65.7
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 3.1e-146 522.3 388 63.4
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 1.2e-145 520.4 395 64.6
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 2.0e-145 519.6 410 62.9
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 7.7e-145 517.7 390 65.9
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 2.2e-144 516.2 390 63.8
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 3.8e-144 515.4 382 63.4
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 1.1e-143 513.8 382 63.4
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 3.2e-143 512.3 382 63.1
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 4.2e-143 511.9 388 64.9
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 1.2e-142 510.4 402 61.9
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 1.4e-141 506.9 387 62.5
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 3.0e-141 505.8 404 62.1
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 5.1e-141 505.0 382 63.4
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 8.8e-141 504.2 387 63.0
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 4.3e-140 501.9 389 61.2
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 4.3e-140 501.9 387 62.5
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 7.4e-140 501.1 383 63.4
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 7.4e-140 501.1 384 63.5
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 1.7e-139 500.0 386 62.2
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 2.2e-139 499.6 385 61.3
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 2.2e-139 499.6 393 61.8
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 2.8e-139 499.2 385 61.3
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 2.8e-139 499.2 389 62.2
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 2.8e-139 499.2 384 62.5
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 3.7e-139 498.8 382 62.8
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.1e-138 497.3 378 63.5
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 4.1e-138 495.4 384 61.7
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 5.3e-138 495.0 382 62.6
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 6.9e-138 494.6 455 56.3
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 9.1e-138 494.2 389 60.7
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 1.5e-137 493.4 381 61.4
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 2.0e-137 493.0 385 60.5
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 2.0e-137 493.0 381 60.6
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 5.9e-137 491.5 383 60.3
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 7.7e-137 491.1 385 62.9
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 7.7e-137 491.1 474 54.0
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.0e-136 490.7 383 60.8
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 1.3e-136 490.3 385 60.5
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 1.3e-136 490.3 387 62.0
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 1.7e-136 490.0 391 60.9
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 2.2e-136 489.6 391 60.6
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 5.0e-136 488.4 385 60.8
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 6.5e-136 488.0 385 59.7
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 1.9e-135 486.5 383 59.5
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 4.2e-135 485.3 385 59.5
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 5.5e-135 485.0 412 58.7
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 9.4e-135 484.2 385 58.4
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 1.6e-134 483.4 391 60.9
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 2.7e-134 482.6 386 59.3
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 7.9e-134 481.1 383 63.2
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 7.9e-134 481.1 413 58.4
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 1.0e-133 480.7 381 59.8
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 1.4e-133 480.3 391 59.6
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 1.4e-133 480.3 391 59.6
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 1.4e-133 480.3 391 59.8
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.4e-133 480.3 408 58.1
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.4e-133 480.3 384 61.2
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 2.3e-133 479.6 424 55.7
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 6.7e-133 478.0 385 58.7
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 2.6e-132 476.1 420 56.2
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 4.8e-131 471.9 382 60.5
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 7.7e-129 464.5 386 58.8
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.3e-128 463.8 354 63.6
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 4.0e-125 452.2 371 60.1
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 2.0e-124 449.9 498 49.6
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 5.7e-124 448.4 381 57.0
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 1.7e-123 446.8 352 59.7
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 4.8e-123 445.3 405 54.3
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 1.2e-121 440.7 386 57.0
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 1.7e-120 436.8 386 56.7
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 1.5e-119 433.7 381 53.8
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 1.6e-118 430.3 383 54.6
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 7.5e-116 421.4 379 52.2
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 1.7e-115 420.2 378 55.6
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 2.5e-111 406.4 375 55.2
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 4.2e-111 405.6 379 54.9
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 9.5e-111 404.4 304 64.8
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 2.7e-110 402.9 386 50.3
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 1.8e-101 373.6 499 43.7
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 5.9e-97 358.6 327 54.7
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 5.4e-90 335.5 413 44.3
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 7.8e-89 331.6 379 45.1
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.5e-87 327.4 277 59.2
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 5.6e-87 325.5 216 68.5
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 2.7e-81 306.6 378 43.7
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 6.0e-81 305.4 382 41.1
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 1.5e-76 290.8 216 61.1
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.7e-75 287.3 297 51.2
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 3.2e-74 283.1 169 73.4
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 7.8e-73 278.5 362 43.6
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 1.3e-72 277.7 234 57.7
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 5.6e-71 272.3 172 68.6
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 2.1e-65 253.8 235 54.5
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 1.7e-64 250.8 179 64.2
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 6.6e-64 248.8 407 40.5
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 2.2e-59 233.8 141 73.0
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 1.6e-54 217.6 255 47.5
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 9.0e-53 211.8 382 37.2
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 3.8e-51 206.5 563 28.1
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 4.2e-50 203.0 127 70.9
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 4.2e-50 203.0 379 35.1
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 4.6e-49 199.5 121 74.4
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 8.7e-48 195.3 136 66.2
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 5.3e-45 186.0 114 70.2
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 2.2e-43 180.6 278 38.8
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 6.5e-43 179.1 271 39.9
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 7.1e-42 175.6 152 52.0
Aa31LG4G5860 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.3e-38 164.9 99 71.7
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 2.0e-36 157.5 440 28.9
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 2.2e-35 154.1 254 37.0
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 2.5e-34 150.6 179 44.7
Lj4C790T17 Lonicera japonica HOM05D005790 ORTHO05D007464 1.5e-31 141.4 79 79.7
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 4.2e-26 123.2 376 29.8
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 5.1e-24 116.3 458 26.4
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 2.0e-23 114.4 166 40.4
MD15G1017900 Malus domestica HOM05D005790 ORTHO05D007464 1.3e-22 111.7 226 36.3
MD15G1018000 Malus domestica HOM05D005790 ORTHO05D007464 1.3e-22 111.7 226 36.3
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 5.3e-21 106.3 424 27.1
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 7.2e-18 95.9 54 75.9
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 1.6e-17 94.7 58 67.2
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 1.8e-16 91.3 103 47.6
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 3.3e-15 87.0 59 61.0
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 3.3e-15 87.0 51 70.6
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 1.4e-08 65.1 40 70.0
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 2.0e-07 61.2 41 65.9
COL.COLO4_38433 Corchorus olitorius HOM05D005790 ORTHO05D030850 2.0e-07 61.2 38 57.9
HanXRQChr15g0494631 Helianthus annuus HOM05D000684 ORTHO05D000688 7.5e-07 59.3 198 30.3
Actinidia29794 Actinidia chinensis HOM05D005790 ORTHO05D030850 2.2e-06 57.8 31 67.7
Gorai.005G199500 Gossypium raimondii HOM05D002561 ORTHO05D006466 2.2e-06 57.8 96 32.3
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 2.8e-06 57.4 35 74.3
VMungo0331G1008 Vigna mungo HOM05D005790 ORTHO05D007464 2.8e-06 57.4 27 77.8
unitig_0.g2442 Utricularia gibba HOM05D001874 ORTHO05D002166 6.3e-06 56.2 190 27.4


User provided reference genes

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