Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3776 Erigeron canadensis HOM05D005111 ORTHO05D006650 2.0e-103 379.0 184 100.0
Lsat_1_v5_gn_8_69941 Lactuca sativa HOM05D005111 ORTHO05D006650 1.6e-100 369.4 184 96.7
HanXRQChr15g0474461 Helianthus annuus HOM05D005111 ORTHO05D006650 3.4e-98 361.7 181 95.6
CSS0013590 Camellia sinensis var. sinensis HOM05D005111 ORTHO05D006650 6.1e-92 340.9 184 88.6
Hma1.2p1_0697F.1_g204930 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 2.3e-91 339.0 182 88.5
Lj7P412T18 Lonicera japonica HOM05D005111 ORTHO05D006650 5.2e-91 337.8 182 88.5
Dinv35035 Davidia involucrata HOM05D005111 ORTHO05D006650 1.7e-89 332.8 184 87.0
Dinv33518 Davidia involucrata HOM05D005111 ORTHO05D006650 4.9e-89 331.3 184 87.5
Actinidia28460 Actinidia chinensis HOM05D005111 ORTHO05D006650 4.1e-88 328.2 184 85.3
Actinidia36066 Actinidia chinensis HOM05D005111 ORTHO05D006650 4.1e-88 328.2 184 85.3
GSVIVG01032518001 Vitis vinifera HOM05D005111 ORTHO05D006650 5.4e-88 327.8 184 84.8
Nitab4.5_0000632g0170 Nicotiana tabacum HOM05D005111 ORTHO05D006650 3.5e-87 325.1 182 85.2
Nitab4.5_0000844g0360 Nicotiana tabacum HOM05D005111 ORTHO05D006650 3.5e-87 325.1 184 84.8
DCAR_013972 Daucus carota HOM05D005111 ORTHO05D006650 4.6e-87 324.7 182 84.1
TWI56G1475 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 4.6e-87 324.7 184 83.2
Oeu047328.1 Olea europaea HOM05D005111 ORTHO05D006650 2.3e-86 322.4 182 83.5
Cfa007459 Carpinus fangiana HOM05D005111 ORTHO05D006650 3.9e-86 321.6 184 84.2
CiPaw.04G023100 Carya illinoinensis HOM05D005111 ORTHO05D006650 3.9e-86 321.6 184 83.7
Prupe.3G280400 Prunus persica HOM05D005111 ORTHO05D006650 6.6e-86 320.9 184 82.6
MD17G1038600 Malus domestica HOM05D005111 ORTHO05D006650 8.6e-86 320.5 184 82.6
Peaxi162Scf00036g00163 Petunia axillaris HOM05D005111 ORTHO05D006650 8.6e-86 320.5 182 84.1
Rhsim08G0056700 Rhododendron simsii HOM05D005111 ORTHO05D006650 1.1e-85 320.1 184 82.6
TWI36G0044 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 1.1e-85 320.1 184 82.6
CAN.G809.38 Capsicum annuum HOM05D005111 ORTHO05D006650 2.5e-85 318.9 182 84.6
Solyc02g081950.4 Solanum lycopersicum HOM05D005111 ORTHO05D006650 2.5e-85 318.9 182 83.5
Sopen02g026580 Solanum pennellii HOM05D005111 ORTHO05D006650 3.3e-85 318.5 182 83.0
PGSC0003DMG400007321 Solanum tuberosum HOM05D005111 ORTHO05D006650 4.3e-85 318.2 182 83.5
Haze_14637 Corylus avellana HOM05D005111 ORTHO05D006650 5.6e-85 317.8 178 85.4
Nn3g16957 Nelumbo nucifera HOM05D005111 ORTHO05D006650 5.6e-85 317.8 184 80.4
MD09G1037200 Malus domestica HOM05D005111 ORTHO05D006650 7.3e-85 317.4 184 81.0
CANSAT64G0323 Cannabis sativa HOM05D005111 ORTHO05D006650 9.5e-85 317.0 184 81.5
Cc07_g02510 Coffea canephora HOM05D005111 ORTHO05D006650 3.6e-84 315.1 178 84.3
RcHm_v2.0_Chr2g0170641 Rosa chinensis HOM05D005111 ORTHO05D006650 3.6e-84 315.1 184 81.5
TAR622G0537 Trochodendron aralioides HOM05D005111 ORTHO05D006650 3.6e-84 315.1 184 81.0
Ciclev10016872m.g Citrus clementina HOM05D005111 ORTHO05D006650 8.0e-84 313.9 184 81.5
FAN09G2278 Fragaria x ananassa HOM05D005111 ORTHO05D006650 1.4e-83 313.2 184 80.4
Hma1.2p1_2931F.1_g330500 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 1.8e-83 312.8 184 79.3
FAN02G1641 Fragaria x ananassa HOM05D005111 ORTHO05D006650 2.3e-83 312.4 184 79.9
FAN05G4920 Fragaria x ananassa HOM05D005111 ORTHO05D006650 3.1e-83 312.0 184 79.9
Gorai.006G028500 Gossypium raimondii HOM05D005111 ORTHO05D006650 3.1e-83 312.0 184 78.3
AUR62032092 Chenopodium quinoa HOM05D005111 ORTHO05D006650 4.0e-83 311.6 184 77.7
Manes.15G180000 Manihot esculenta HOM05D005111 ORTHO05D006650 4.0e-83 311.6 184 81.5
PGR083G2413 Punica granatum HOM05D005111 ORTHO05D006650 4.0e-83 311.6 182 80.8
Hma1.2p1_0967F.1_g242385 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 5.2e-83 311.2 184 79.3
Potri.001G350300 Populus trichocarpa HOM05D005111 ORTHO05D006650 5.2e-83 311.2 185 80.5
CiPaw.03G035600 Carya illinoinensis HOM05D005111 ORTHO05D006650 8.9e-83 310.5 184 81.5
Nn4g22869 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.2e-82 310.1 184 77.7
Gohir.D09G024300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.5e-82 309.7 184 77.7
QL02p077635 Quercus lobata HOM05D005111 ORTHO05D006650 1.5e-82 309.7 183 79.8
Sabra16G0229800 Salix brachista HOM05D005111 ORTHO05D006650 1.5e-82 309.7 185 80.0
ClCG09G018710 Citrullus lanatus HOM05D005111 ORTHO05D006650 2.0e-82 309.3 184 79.3
ClCG09G018770 Citrullus lanatus HOM05D005111 ORTHO05D006650 2.0e-82 309.3 184 79.3
Aa31LG2G4740 Aethionema arabicum HOM05D005111 ORTHO05D006650 2.6e-82 308.9 184 79.9
MSTRG.3306 Avicennia marina HOM05D005111 ORTHO05D006650 3.4e-82 308.5 178 82.6
Manes.17G124400 Manihot esculenta HOM05D005111 ORTHO05D006650 3.4e-82 308.5 184 80.4
Nitab4.5_0000389g0080 Nicotiana tabacum HOM05D005111 ORTHO05D006650 3.4e-82 308.5 182 81.3
COL.COLO4_32007 Corchorus olitorius HOM05D005111 ORTHO05D006650 4.4e-82 308.1 184 78.8
TAR374G1688 Trochodendron aralioides HOM05D005111 ORTHO05D006650 5.8e-82 307.8 182 79.7
Sp2g17070 Schrenkiella parvula HOM05D005111 ORTHO05D006650 7.5e-82 307.4 184 79.3
MELO3C021519.2 Cucumis melo HOM05D005111 ORTHO05D006650 2.2e-81 305.8 184 78.8
CsaV3_5G037360 Cucumis sativus L. HOM05D005111 ORTHO05D006650 2.2e-81 305.8 184 78.8
Gohir.D10G087701 Gossypium hirsutum HOM05D005111 ORTHO05D006650 2.2e-81 305.8 184 77.2
Gorai.011G096000 Gossypium raimondii HOM05D005111 ORTHO05D006650 2.2e-81 305.8 184 77.2
SalBow1G6258 Salvia bowleyana HOM05D005111 ORTHO05D006650 2.2e-81 305.8 177 79.7
Thecc.04G004900 Theobroma cacao HOM05D005111 ORTHO05D006650 2.9e-81 305.4 184 78.8
Atru.chr6.2171 Acer truncatum HOM05D005111 ORTHO05D006650 3.7e-81 305.1 184 79.3
Nitab4.5_0000005g0410 Nicotiana tabacum HOM05D005111 ORTHO05D006650 3.7e-81 305.1 182 80.2
FvH4_6g50340 Fragaria vesca HOM05D005111 ORTHO05D006650 4.9e-81 304.7 177 81.4
FAN14G5899 Fragaria x ananassa HOM05D005111 ORTHO05D006650 4.9e-81 304.7 177 81.4
Gohir.A10G101300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 8.3e-81 303.9 184 77.7
Duzib147G1596 Durio zibethinus HOM05D005111 ORTHO05D006650 1.1e-80 303.5 184 76.1
MSTRG.15504 Avicennia marina HOM05D005111 ORTHO05D006650 1.4e-80 303.1 178 80.3
Sed0025070 Sechium edule HOM05D005111 ORTHO05D006650 1.4e-80 303.1 184 77.2
EL10Ac2g03364 Beta vulgaris HOM05D005111 ORTHO05D006650 1.9e-80 302.8 178 79.2
Sed0001363 Sechium edule HOM05D005111 ORTHO05D006650 3.2e-80 302.0 184 77.7
Migut.H00147 Erythranthe guttata HOM05D005111 ORTHO05D006650 4.1e-80 301.6 178 78.1
Aqoxy3G00932 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 5.4e-80 301.2 181 76.8
Duzib264G0177 Durio zibethinus HOM05D005111 ORTHO05D006650 1.2e-79 300.1 184 77.2
Thhalv10005667m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 1.6e-79 299.7 184 77.7
Gohir.D04G053100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.6e-79 299.7 182 75.8
Gorai.012G059600 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.6e-79 299.7 182 75.8
Gohir.A05G361100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 2.1e-79 299.3 182 75.8
Ah.16g106920 Amaranthus hybridus HOM05D005111 ORTHO05D006650 2.7e-79 298.9 184 73.4
THA.LOC104823919 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 3.5e-79 298.5 184 78.3
THA.LOC104805409 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 7.8e-79 297.4 180 79.4
Potri.017G073800 Populus trichocarpa HOM05D005111 ORTHO05D006650 8.6e-78 293.9 181 77.9
AL7G49820 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 1.9e-77 292.7 184 73.9
AT5G40190 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 2.5e-77 292.4 184 73.9
CDE10G0493 Ceratophyllum demersum HOM05D005111 ORTHO05D006650 2.5e-77 292.4 184 73.4
SGA_v2.0_scaffold205G41716 Striga asiatica HOM05D005111 ORTHO05D006650 2.5e-77 292.4 178 74.2
AL5G17640 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 7.3e-77 290.8 183 75.4
BcaC06g30932 Brassica carinata HOM05D005111 ORTHO05D006650 9.5e-77 290.4 193 75.1
SalBow7G0796 Salvia bowleyana HOM05D005111 ORTHO05D006650 1.2e-76 290.0 177 78.0
BcaC06g33750 Brassica carinata HOM05D005111 ORTHO05D006650 2.1e-76 289.3 182 74.7
C07p37330 Brassica napus HOM05D005111 ORTHO05D006650 2.1e-76 289.3 182 74.7
BolC7t44243H Brassica oleracea HOM05D005111 ORTHO05D006650 2.1e-76 289.3 182 74.7
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 2.8e-76 288.9 177 75.1
Thhalv10027951m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 2.8e-76 288.9 180 75.0
A06p40670 Brassica napus HOM05D005111 ORTHO05D006650 3.6e-76 288.5 182 74.2
BraA06t26987Z Brassica rapa HOM05D005111 ORTHO05D006650 3.6e-76 288.5 182 74.2
unitig_744.g24353 Utricularia gibba HOM05D005111 ORTHO05D006650 4.7e-76 288.1 179 74.9
Eucgr.J02178 Eucalyptus grandis HOM05D005111 ORTHO05D006650 6.2e-76 287.7 184 71.2
CARHR261950 Cardamine hirsuta HOM05D005111 ORTHO05D006650 1.1e-75 287.0 184 73.4
Carub.0007s3546 Capsella rubella HOM05D005111 ORTHO05D006650 1.8e-75 286.2 184 72.8
SEGI_23218 Sequoiadendron giganteum HOM05D005111 ORTHO05D006650 3.1e-75 285.4 182 69.8
SGA_v2.0_scaffold30G12485 Striga asiatica HOM05D005111 ORTHO05D006650 3.1e-75 285.4 178 73.0
PSO017G5141 Papaver somniferum HOM05D005111 ORTHO05D006650 6.8e-75 284.3 184 72.8
PSO478G1103 Papaver somniferum HOM05D005111 ORTHO05D006650 6.8e-75 284.3 184 72.3
Migut.K01364 Erythranthe guttata HOM05D005111 ORTHO05D006650 1.5e-74 283.1 179 73.7
Glyma.19G011900 Glycine max HOM05D005111 ORTHO05D006650 4.4e-74 281.6 182 70.9
VMungo0464G0112 Vigna mungo HOM05D005111 ORTHO05D006650 1.7e-73 279.6 185 70.3
Glyma.19G012000 Glycine max HOM05D005111 ORTHO05D006650 2.2e-73 279.3 179 70.9
Carub.0005s0666 Capsella rubella HOM05D005111 ORTHO05D006650 2.9e-73 278.9 177 76.8
Sc20g0002810 Simmondsia chinensis HOM05D005111 ORTHO05D006650 3.7e-73 278.5 170 77.6
CiPaw.06G158200 Carya illinoinensis HOM05D005111 ORTHO05D006650 8.3e-73 277.3 184 71.2
Phvul.004G019100 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 1.9e-72 276.2 185 69.2
Actinidia33968 Actinidia chinensis HOM05D005111 ORTHO05D000390 7.1e-72 274.2 184 72.3
AT3G28140 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 7.1e-72 274.2 185 71.9
VMungo0464G1864 Vigna mungo HOM05D005111 ORTHO05D006650 9.2e-72 273.9 185 68.6
Aqoxy3G03068 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 1.3e-70 270.0 184 69.0
Phvul.004G019200 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 1.3e-70 270.0 185 67.6
Glyma.13G070800 Glycine max HOM05D005111 ORTHO05D006650 6.6e-70 267.7 182 67.6
Lj2g0005029 Lotus japonicus HOM05D005111 ORTHO05D006650 6.6e-70 267.7 178 66.9
arahy.Tifrunner.gnm1.ann1.68QD6J Arachis hypogaea HOM05D005111 ORTHO05D006650 1.5e-69 266.5 183 69.9
Psat1g060720 Pisum sativum HOM05D005111 ORTHO05D006650 2.9e-65 252.3 177 66.7
TPR.G2260 Trifolium pratense HOM05D005111 ORTHO05D006650 1.1e-64 250.4 182 64.3
Ca_04214_v3 Cicer arietinum L. HOM05D005111 ORTHO05D006650 1.4e-64 250.0 179 65.9
Sp7g01780 Schrenkiella parvula HOM05D005111 ORTHO05D006650 3.9e-62 241.9 180 65.6
Lalb_Chr02g0159721 Lupinus albus HOM05D005111 ORTHO05D006650 6.6e-62 241.1 186 59.7
ATR1149G112 Amborella trichopoda HOM05D005111 ORTHO05D006650 1.8e-59 233.0 190 61.1
BcaC06g30930 Brassica carinata HOM05D005111 ORTHO05D006650 2.6e-58 229.2 182 64.3
Medtr6g007773 Medicago truncatula HOM05D005111 ORTHO05D006650 5.8e-58 228.0 179 60.3
Cpa.g.sc286.5 Carica papaya HOM05D005111 ORTHO05D006650 1.3e-54 216.9 165 66.1
Os09g0375400 Oryza sativa ssp. japonica HOM05D005111 ORTHO05D006650 1.7e-49 199.9 184 55.4
Gohir.A09G025000 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.9e-48 196.4 121 71.9
FAN09G1763 Fragaria x ananassa HOM05D005111 ORTHO05D006650 3.9e-46 188.7 115 74.8
Zm00001eb098850 Zea mays HOM05D005111 ORTHO05D006650 2.8e-44 182.6 200 49.0
Ah.07g198430 Amaranthus hybridus HOM05D005111 ORTHO05D003582 1.4e-43 180.3 159 54.7
SMO367G0111 Selaginella moellendorffii HOM05D005111 ORTHO05D006650 5.5e-40 168.3 179 42.5
Actinidia27813 Actinidia chinensis HOM05D005111 ORTHO05D006650 6.1e-31 138.3 109 64.2
CARHR149780 Cardamine hirsuta HOM05D005111 ORTHO05D006650 7.4e-29 131.3 99 62.6
Nn8g40738 Nelumbo nucifera HOM05D005111 ORTHO05D006650 9.0e-27 124.4 75 77.3
Ciclev10033710m.g Citrus clementina HOM05D005111 ORTHO05D152558 3.7e-20 102.4 164 34.1
BcaC03g17502 Brassica carinata HOM05D005111 ORTHO05D039329 1.6e-15 87.0 52 76.9
BraA02t08578Z Brassica rapa HOM05D000028 ORTHO05D000390 1.4e-14 84.0 59 67.8
A02p35780 Brassica napus HOM05D005111 ORTHO05D006650 3.0e-14 82.8 55 70.9
BcaC06g33752 Brassica carinata HOM05D005111 ORTHO05D093848 2.0e-10 70.1 38 84.2


User provided reference genes

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