Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 0.0e+00 1213.7 694 100.0
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 3.7e-246 855.1 697 74.7
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 1.3e-230 803.5 699 72.8
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 8.6e-179 631.3 710 57.9
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 1.1e-178 630.9 710 55.5
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 4.4e-175 619.0 710 54.9
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.9e-166 589.7 717 56.5
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 2.4e-165 586.6 706 51.4
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 3.2e-165 586.3 706 56.4
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 1.6e-164 583.9 709 54.9
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 7.3e-162 575.1 707 55.3
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 8.1e-161 571.6 714 54.9
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 1.1e-160 571.2 706 56.1
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 4.4e-159 565.8 718 53.1
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 2.9e-158 563.1 710 50.8
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 3.8e-158 562.8 712 51.8
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 4.9e-158 562.4 709 55.4
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 6.4e-158 562.0 708 54.0
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 2.4e-157 560.1 704 55.7
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 5.4e-157 558.9 708 52.4
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 7.1e-157 558.5 705 54.6
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.2e-156 557.8 705 54.9
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.1e-156 557.0 706 55.1
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 6.0e-156 555.4 708 49.9
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 7.8e-156 555.1 706 55.2
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 3.9e-155 552.7 712 52.5
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.1e-154 551.2 715 55.5
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 1.9e-154 550.4 708 52.8
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 2.5e-154 550.1 706 54.8
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 2.5e-154 550.1 705 54.2
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 9.6e-154 548.1 705 54.0
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 1.2e-153 547.7 708 54.0
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 1.6e-153 547.4 712 53.8
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 9.0e-152 541.6 712 51.0
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.2e-151 541.2 715 55.2
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 4.4e-151 539.3 709 55.1
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 1.7e-150 537.3 713 54.6
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 2.9e-150 536.6 709 53.9
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 4.9e-150 535.8 687 53.9
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 6.4e-150 535.4 709 50.8
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 5.4e-149 532.3 624 60.7
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 7.1e-149 531.9 776 42.1
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 1.6e-148 530.8 712 51.3
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 6.0e-148 528.9 710 52.0
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 1.0e-147 528.1 721 49.5
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 5.1e-147 525.8 713 53.9
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 6.6e-147 525.4 708 53.2
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 1.1e-146 524.6 712 54.6
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 1.5e-146 524.2 710 51.0
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 4.3e-146 522.7 712 53.8
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 9.6e-146 521.5 709 52.3
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 2.1e-145 520.4 712 52.9
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 8.1e-145 518.5 710 52.5
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 2.4e-144 516.9 710 52.4
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 5.8e-143 512.3 711 52.5
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 1.7e-142 510.8 741 51.3
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 2.9e-142 510.0 712 52.7
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 8.4e-142 508.4 710 52.1
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.9e-141 507.3 712 50.3
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 2.4e-141 506.9 706 47.6
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 2.4e-141 506.9 708 53.0
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 6.0e-140 502.3 674 52.2
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 1.0e-139 501.5 730 48.2
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 1.8e-139 500.7 708 48.2
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.3e-137 494.6 708 45.6
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 2.1e-137 493.8 707 51.6
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 2.1e-137 493.8 707 51.6
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 8.1e-137 491.9 740 49.7
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.4e-136 491.1 709 48.9
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 3.1e-136 490.0 728 47.8
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 5.8e-135 485.7 710 52.3
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 3.8e-134 483.0 708 51.7
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 8.4e-134 481.9 711 50.8
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 8.4e-134 481.9 763 41.5
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 1.1e-133 481.5 711 47.8
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 1.4e-133 481.1 708 52.0
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 5.5e-133 479.2 740 46.2
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.6e-132 477.6 735 46.8
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 2.7e-132 476.9 709 45.7
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 3.9e-131 473.0 708 51.7
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 3.9e-131 473.0 709 49.9
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 5.1e-131 472.6 638 54.4
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 6.7e-131 472.2 708 51.0
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 1.1e-130 471.5 709 49.9
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 1.1e-130 471.5 697 50.8
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.5e-130 471.1 708 50.4
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 4.3e-130 469.5 710 48.0
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 7.4e-130 468.8 709 49.5
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 8.2e-129 465.3 707 50.5
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 1.4e-128 464.5 709 50.5
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 2.4e-128 463.8 709 49.2
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 9.0e-128 461.8 706 49.3
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.7e-126 457.6 704 48.2
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 6.5e-126 455.7 708 49.2
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 6.0e-124 449.1 638 51.1
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 4.8e-121 439.5 717 47.0
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 4.8e-121 439.5 655 51.6
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 2.4e-120 437.2 706 42.4
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 2.9e-118 430.3 410 66.8
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 6.7e-115 419.1 711 39.9
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 2.2e-113 414.1 652 50.6
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 8.2e-113 412.1 712 40.3
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 7.7e-111 405.6 570 51.9
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.8e-110 403.3 529 51.2
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 9.4e-109 398.7 700 40.0
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.6e-108 397.9 536 44.0
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.4e-107 394.8 714 37.4
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.3e-106 390.2 694 40.2
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 1.1e-104 385.2 711 44.0
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 4.1e-104 383.3 714 42.0
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 1.3e-102 378.3 730 38.9
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 1.3e-102 378.3 706 37.3
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 9.4e-101 372.1 721 37.7
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.8e-99 367.9 520 48.8
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.3e-99 367.5 523 53.2
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 1.7e-94 351.3 485 53.0
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 2.3e-91 340.9 627 47.5
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 8.2e-89 332.4 536 43.1
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 1.4e-88 331.6 526 46.8
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 3.3e-77 293.9 317 59.6
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 6.8e-75 286.2 716 40.1
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.8e-72 278.1 537 35.4
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.1e-64 252.3 494 36.8
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.7e-62 245.0 481 37.2
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 3.1e-59 234.2 466 35.8
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 6.8e-59 233.0 348 41.7
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 7.0e-56 223.0 274 57.7
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.6e-55 221.9 431 36.0
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 6.0e-55 219.9 257 65.4
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 6.8e-51 206.5 278 51.8
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 3.0e-46 191.0 726 30.2
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 1.8e-43 181.8 141 83.0
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 2.9e-41 174.5 560 27.7
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 2.9e-41 174.5 193 48.7
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 3.0e-38 164.5 529 30.6
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 7.3e-37 159.8 138 60.9
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 4.4e-34 150.6 189 54.0
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.5e-31 141.0 154 60.4
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 3.5e-31 141.0 237 49.4
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 1.0e-30 139.4 137 54.7
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 6.9e-27 126.7 135 52.6
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 2.9e-25 121.3 129 50.4
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 1.6e-23 115.5 137 49.6
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 3.9e-22 110.9 128 46.1
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 1.9e-21 108.6 133 47.4
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 2.1e-20 105.1 126 48.4
Lsat_1_v5_gn_3_58200 Lactuca sativa HOM05D003682 ORTHO05D004224 2.8e-20 104.8 66 74.2
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 4.8e-20 104.0 111 52.3
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.9e-19 100.1 100 55.0
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.1e-16 92.8 98 55.1
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 1.4e-16 92.4 257 30.0
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 1.2e-15 89.4 141 37.6
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 4.6e-15 87.4 97 47.4
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 4.6e-15 87.4 161 37.3
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.9e-15 86.7 99 47.5
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.0e-14 86.3 95 47.4
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.8e-14 85.5 99 46.5
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.8e-14 85.5 99 46.5
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 3.0e-14 84.7 285 27.7
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.6e-12 79.0 99 43.4
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 2.8e-12 78.2 73 54.8
CSS0000677 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.8e-12 77.4 99 44.4
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.1e-11 76.3 51 62.7
CSS0006921 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-11 75.9 99 42.4
CSS0029231 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.4e-11 75.1 98 43.9
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.0e-11 74.3 56 64.3
CSS0045772 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.5e-10 72.4 56 62.5
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 2.0e-10 72.0 263 27.8
HanXRQChr11g0332681 Helianthus annuus HOM05D003682 ORTHO05D004224 2.6e-10 71.6 52 71.2
CSS0029631 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 7.6e-10 70.1 56 60.7
CSS0037736 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.0e-09 69.7 56 60.7
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.3e-09 69.3 56 60.7
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.3e-09 69.3 56 60.7
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 2.9e-09 68.2 131 32.1
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 8.4e-09 66.6 41 73.2
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 1.4e-08 65.9 74 45.9
CAN.G475.12 Capsicum annuum HOM05D003682 ORTHO05D004224 3.2e-08 64.7 54 55.6
arahy.Tifrunner.gnm1.ann1.H7L4UV Arachis hypogaea HOM05D003682 ORTHO05D004224 4.2e-08 64.3 90 44.4
arahy.Tifrunner.gnm1.ann1.R6K80C Arachis hypogaea HOM05D003682 ORTHO05D004224 2.7e-07 61.6 90 43.3
Nn1g05594 Nelumbo nucifera HOM05D003682 ORTHO05D004224 3.5e-07 61.2 72 48.6
Prupe.1G572700 Prunus persica HOM05D003682 ORTHO05D004224 3.9e-06 57.8 61 49.2


User provided reference genes

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