Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 0.0e+00 1264.6 660 100.0
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 0.0e+00 1151.0 663 84.0
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 0.0e+00 1141.3 661 83.5
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 1.4e-266 922.9 619 72.2
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 5.7e-265 917.5 614 72.1
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.7e-262 908.7 614 69.7
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 1.0e-261 906.7 617 70.3
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 2.2e-261 905.6 621 70.5
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 6.5e-261 904.0 614 69.7
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.2e-259 899.8 613 70.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 8.0e-259 897.1 613 71.0
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 2.3e-258 895.6 617 69.5
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 4.0e-258 894.8 620 70.6
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 4.0e-258 894.8 619 70.6
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 8.8e-258 893.6 613 69.2
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.2e-257 893.3 619 70.0
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.5e-257 892.9 617 69.2
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.4e-257 891.7 561 74.7
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 7.5e-257 890.6 617 69.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 3.7e-256 888.3 610 70.5
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 4.8e-256 887.9 619 69.3
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 2.0e-254 882.5 621 69.1
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 4.5e-254 881.3 625 68.5
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 2.2e-253 879.0 617 68.9
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 5.5e-252 874.4 616 68.3
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 5.5e-252 874.4 618 69.6
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 9.5e-252 873.6 558 73.7
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.6e-251 872.8 572 73.1
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 4.7e-251 871.3 616 68.8
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 8.0e-251 870.5 572 71.9
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 8.0e-251 870.5 572 71.2
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.0e-250 870.2 616 68.7
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 1.4e-250 869.8 613 68.7
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 2.3e-250 869.0 558 73.8
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 3.0e-250 868.6 569 71.9
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 4.0e-250 868.2 558 73.3
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 5.2e-250 867.8 618 69.3
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 2.0e-249 865.9 570 71.8
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 1.7e-248 862.8 616 67.2
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.9e-248 861.3 555 73.9
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 2.4e-247 859.0 625 67.5
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 1.6e-246 856.3 561 71.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.0e-246 855.9 585 70.4
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 3.5e-246 855.1 618 67.2
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 7.7e-246 854.0 620 67.3
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 8.6e-245 850.5 616 67.9
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.1e-244 850.1 626 66.6
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.1e-244 850.1 626 66.6
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.1e-244 850.1 615 67.5
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.5e-244 849.7 565 70.8
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.9e-244 849.4 583 70.0
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.5e-244 849.0 616 67.9
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 3.3e-244 848.6 627 66.2
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.6e-244 847.8 616 67.5
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 9.5e-244 847.0 614 67.8
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.2e-243 846.7 618 66.8
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 1.6e-243 846.3 625 66.2
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.6e-243 846.3 614 67.8
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.8e-243 845.5 617 67.1
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 8.0e-243 844.0 625 66.1
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 1.0e-242 843.6 626 66.1
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.0e-242 843.6 614 67.8
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 1.4e-242 843.2 624 66.8
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.3e-242 842.4 558 71.3
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 3.0e-242 842.0 624 66.2
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 4.0e-242 841.6 612 67.3
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 6.8e-242 840.9 560 71.6
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 6.8e-242 840.9 558 70.6
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 2.0e-241 839.3 619 66.6
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 2.6e-241 839.0 560 71.6
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 3.4e-241 838.6 616 65.4
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.3e-240 833.9 614 66.3
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 1.4e-239 833.2 618 66.8
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.8e-239 832.8 563 70.2
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 9.2e-239 830.5 621 65.5
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 4.6e-238 828.2 565 69.6
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 7.8e-238 827.4 613 66.7
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 5.0e-237 824.7 557 71.3
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 5.2e-234 814.7 622 64.8
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 5.8e-233 811.2 610 65.7
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 1.9e-231 806.2 552 71.2
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 2.5e-228 795.8 615 63.9
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 3.6e-227 792.0 557 68.8
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.3e-226 789.3 559 66.5
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 3.7e-224 781.9 549 69.4
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.2e-223 778.9 571 65.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 9.2e-223 777.3 552 69.0
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.3e-220 768.5 613 63.5
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.8e-218 763.1 749 54.5
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 9.6e-212 740.7 561 63.3
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 1.8e-210 736.5 737 54.3
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 1.7e-205 719.9 542 66.6
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.1e-204 717.2 616 60.2
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 3.5e-198 695.7 550 62.0
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.1e-186 657.5 468 69.0
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 4.0e-186 655.6 769 48.5
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 2.0e-164 583.6 378 72.8
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 2.2e-147 526.9 406 63.3
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 8.6e-128 461.8 368 62.0
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 3.4e-124 449.9 607 44.5
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 7.5e-116 422.2 631 41.7
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.2e-99 367.5 219 79.0
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 1.3e-96 358.2 246 68.7
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 6.9e-93 345.9 347 52.2
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 3.5e-89 333.6 560 37.5
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.7e-88 328.9 272 62.9
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 8.7e-88 328.9 272 62.9
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.2e-75 287.7 220 62.7
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.5e-71 275.0 251 58.2
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 5.1e-56 223.4 551 30.9
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 3.2e-50 204.1 250 46.0
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 9.1e-45 186.0 218 47.7
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.3e-43 182.2 180 54.4
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 4.7e-33 147.1 137 56.9
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 2.3e-32 144.8 124 59.7
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.0e-23 115.2 138 45.7
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 3.6e-09 67.8 170 31.8
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 2.0e-07 62.0 91 34.1


User provided reference genes

Program Settings