Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 5.6e-86 320.9 157 100.0
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 7.4e-54 214.2 152 66.4
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 2.2e-53 212.6 153 64.1
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 6.3e-53 211.1 164 61.6
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 3.1e-52 208.8 154 61.7
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 4.5e-51 204.9 152 62.5
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 2.9e-50 202.2 152 61.8
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 4.2e-49 198.4 152 59.2
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 4.2e-49 198.4 152 59.2
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 5.5e-49 198.0 153 60.1
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 5.5e-49 198.0 152 60.5
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.2e-48 196.8 153 60.1
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 1.2e-48 196.8 153 59.5
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 1.6e-48 196.4 152 61.2
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 2.1e-48 196.1 152 60.5
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.7e-48 195.7 153 60.1
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.7e-48 195.7 152 61.2
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 2.7e-48 195.7 153 58.8
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 6.1e-48 194.5 152 61.2
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 7.9e-48 194.1 152 60.5
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 1.0e-47 193.7 153 58.2
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 1.0e-47 193.7 152 60.5
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.0e-47 193.7 152 58.6
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 1.0e-47 193.7 152 59.2
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 1.8e-47 193.0 152 59.9
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 3.0e-47 192.2 152 58.6
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 3.0e-47 192.2 153 58.2
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 3.0e-47 192.2 153 58.2
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 3.0e-47 192.2 152 59.2
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 3.9e-47 191.8 152 59.2
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 3.9e-47 191.8 153 57.5
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 3.9e-47 191.8 152 57.9
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 5.1e-47 191.4 152 59.9
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 6.7e-47 191.0 152 59.2
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 6.7e-47 191.0 152 57.9
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 8.8e-47 190.7 153 58.2
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 8.8e-47 190.7 153 58.2
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 8.8e-47 190.7 153 58.2
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 8.8e-47 190.7 152 57.9
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 1.1e-46 190.3 152 58.6
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 1.1e-46 190.3 153 57.5
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.5e-46 189.9 152 59.9
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.5e-46 189.9 152 58.6
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.0e-46 189.5 152 59.2
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 2.0e-46 189.5 153 57.5
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 2.0e-46 189.5 152 59.9
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 2.6e-46 189.1 152 57.9
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 2.6e-46 189.1 152 59.2
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 2.6e-46 189.1 152 59.2
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 2.6e-46 189.1 152 59.2
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 2.6e-46 189.1 152 58.6
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 2.6e-46 189.1 153 56.9
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 3.3e-46 188.7 152 56.6
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 3.3e-46 188.7 151 55.6
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.3e-46 188.7 152 58.6
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.3e-46 188.7 152 57.9
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.3e-46 188.7 152 57.9
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 3.3e-46 188.7 153 56.9
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 3.3e-46 188.7 152 58.6
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 4.4e-46 188.3 142 63.4
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 4.4e-46 188.3 152 57.9
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 5.7e-46 188.0 152 57.2
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 7.4e-46 187.6 152 58.6
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 7.4e-46 187.6 152 59.2
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 9.7e-46 187.2 152 56.6
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 9.7e-46 187.2 152 58.6
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 9.7e-46 187.2 152 58.6
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 9.7e-46 187.2 154 56.5
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 1.3e-45 186.8 152 57.2
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 1.7e-45 186.4 152 59.2
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 2.2e-45 186.0 152 58.6
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 2.2e-45 186.0 152 58.6
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 2.2e-45 186.0 152 57.9
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 3.7e-45 185.3 152 57.9
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 3.7e-45 185.3 152 55.9
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 3.7e-45 185.3 152 57.2
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 4.8e-45 184.9 152 57.9
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 4.8e-45 184.9 152 57.9
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 4.8e-45 184.9 152 55.9
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 4.8e-45 184.9 152 55.9
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 6.3e-45 184.5 152 56.6
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 6.3e-45 184.5 152 55.9
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 6.3e-45 184.5 153 58.2
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 6.3e-45 184.5 153 58.2
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 8.2e-45 184.1 152 56.6
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 1.1e-44 183.7 153 54.9
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 1.1e-44 183.7 153 54.9
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.1e-44 183.7 152 55.9
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.8e-44 183.0 152 57.9
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.8e-44 183.0 154 54.5
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 2.4e-44 182.6 152 55.3
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 9.1e-44 180.6 152 55.9
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 9.1e-44 180.6 152 56.6
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 1.2e-43 180.3 152 55.3
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.5e-43 179.9 144 56.2
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 1.5e-43 179.9 153 53.6
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 2.0e-43 179.5 152 53.3
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.6e-43 179.1 153 55.6
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 4.5e-43 178.3 152 55.9
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 7.7e-43 177.6 144 55.6
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 7.7e-43 177.6 153 55.6
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.0e-42 177.2 151 53.6
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 1.3e-42 176.8 152 53.9
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 3.8e-42 175.3 152 56.6
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 1.4e-41 173.3 149 52.3
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 7.2e-41 171.0 152 53.9
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 1.2e-40 170.2 153 56.2
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 2.1e-40 169.5 152 50.7
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 3.6e-40 168.7 153 51.6
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 4.7e-40 168.3 155 54.2
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 4.7e-40 168.3 144 54.9
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 6.1e-40 167.9 146 52.7
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 1.4e-39 166.8 152 53.3
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.8e-39 166.4 152 52.6
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.8e-39 166.4 142 55.6
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 6.7e-39 164.5 152 50.7
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 8.8e-39 164.1 152 48.7
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.6e-38 162.5 145 53.1
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.3e-38 162.2 152 50.7
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 5.7e-38 161.4 145 51.7
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 7.4e-38 161.0 149 50.3
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 1.3e-37 160.2 145 51.0
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 1.3e-37 160.2 151 50.3
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.2e-37 159.5 142 50.7
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 2.2e-37 159.5 143 51.0
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 2.8e-37 159.1 144 50.7
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.7e-37 158.7 145 51.0
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 3.7e-37 158.7 145 51.0
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.1e-36 157.1 140 52.1
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 1.4e-36 156.8 145 50.3
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.4e-36 156.0 139 53.2
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 2.4e-36 156.0 137 54.0
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 5.3e-36 154.8 122 61.5
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 9.1e-36 154.1 152 44.7
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.2e-35 153.7 129 55.8
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.0e-35 152.9 152 48.7
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 7.7e-35 151.0 149 49.7
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 1.3e-34 150.2 149 50.3
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 1.3e-34 150.2 152 43.4
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 2.2e-34 149.4 149 50.3
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 2.2e-34 149.4 149 50.3
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 2.2e-34 149.4 149 50.3
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 2.2e-34 149.4 149 50.3
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 3.8e-34 148.7 149 49.7
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 6.5e-34 147.9 149 49.7
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 8.5e-34 147.5 141 47.5
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 8.5e-34 147.5 149 46.3
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 4.2e-33 145.2 119 53.8
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.2e-32 143.7 153 48.4
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 3.6e-32 142.1 152 41.4
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 6.1e-32 141.4 114 56.1
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 1.8e-31 139.8 155 44.5
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 3.0e-31 139.0 144 46.5
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 5.2e-31 138.3 153 43.8
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 8.8e-31 137.5 155 43.2
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 4.4e-30 135.2 144 42.4
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 5.7e-30 134.8 151 40.4
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 7.5e-30 134.4 154 42.2
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 2.2e-29 132.9 144 43.8
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.8e-29 132.5 157 43.3
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.7e-29 132.1 109 57.8
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 3.1e-28 129.0 94 56.4
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 7.7e-27 124.4 154 40.3
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 2.9e-26 122.5 113 52.2
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 3.2e-25 119.0 152 37.5
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 8.0e-24 114.4 148 39.9
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 3.7e-21 105.5 103 44.7
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 4.8e-21 105.1 91 51.6
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.4e-20 102.8 155 40.6
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 4.5e-19 98.6 91 57.1
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 4.2e-17 92.0 90 52.2
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 1.4e-12 77.0 54 63.0
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 4.1e-12 75.5 77 48.1
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 2.8e-08 62.8 54 59.3
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 1.0e-07 60.8 44 59.1


User provided reference genes

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