Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 1.3e-131 473.0 237 100.0
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 3.4e-95 352.1 289 67.8
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 3.0e-83 312.4 291 61.5
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 2.4e-80 302.8 291 58.4
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 1.8e-64 250.0 285 52.6
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 4.1e-64 248.8 280 51.4
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 1.6e-63 246.9 287 50.9
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 2.0e-63 246.5 309 47.6
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 2.7e-63 246.1 284 51.4
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 2.7e-63 246.1 309 47.2
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 2.7e-63 246.1 281 49.5
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 3.5e-63 245.7 283 50.9
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 3.5e-63 245.7 286 50.3
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 7.7e-63 244.6 299 48.5
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 7.7e-63 244.6 290 49.0
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 7.7e-63 244.6 280 51.1
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.0e-62 244.2 299 48.8
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 1.0e-62 244.2 299 48.5
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 1.0e-62 244.2 291 49.5
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 1.3e-62 243.8 283 49.1
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 1.7e-62 243.4 284 49.6
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 2.2e-62 243.0 301 47.8
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 5.0e-62 241.9 284 49.6
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 6.5e-62 241.5 284 49.3
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 8.5e-62 241.1 285 50.5
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 1.1e-61 240.7 295 48.5
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 1.5e-61 240.4 281 50.5
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 4.2e-61 238.8 289 49.5
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 5.5e-61 238.4 287 50.5
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 7.2e-61 238.0 285 50.2
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 9.4e-61 237.7 289 47.4
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 1.2e-60 237.3 285 49.5
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 1.2e-60 237.3 306 45.4
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 1.2e-60 237.3 299 47.2
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.2e-60 237.3 283 49.8
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 1.2e-60 237.3 280 50.4
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 2.1e-60 236.5 307 46.9
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 2.1e-60 236.5 307 46.9
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 3.6e-60 235.7 301 47.5
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 3.6e-60 235.7 280 50.0
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 4.7e-60 235.3 283 49.8
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 4.7e-60 235.3 296 47.0
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 6.1e-60 235.0 308 48.7
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 8.0e-60 234.6 283 49.5
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 8.0e-60 234.6 280 50.4
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 8.0e-60 234.6 280 49.3
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 8.0e-60 234.6 243 54.3
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 8.0e-60 234.6 287 49.1
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.0e-59 234.2 282 50.0
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 1.0e-59 234.2 280 50.0
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 1.0e-59 234.2 303 47.5
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 3.0e-59 232.6 284 48.6
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 3.0e-59 232.6 307 45.9
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 3.0e-59 232.6 280 47.1
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 5.2e-59 231.9 268 50.4
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 5.2e-59 231.9 289 48.1
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 6.8e-59 231.5 284 48.9
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 8.8e-59 231.1 280 48.9
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 8.8e-59 231.1 290 49.0
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 2.6e-58 229.6 296 45.9
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 3.4e-58 229.2 140 76.4
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 3.4e-58 229.2 298 48.7
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 1.3e-57 227.3 284 47.5
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.7e-57 226.9 282 47.9
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 2.2e-57 226.5 295 46.8
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 2.2e-57 226.5 296 47.0
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 2.8e-57 226.1 283 47.0
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 3.7e-57 225.7 281 47.7
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 4.8e-57 225.3 280 47.5
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 6.3e-57 224.9 284 46.8
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.1e-56 224.2 269 49.1
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 1.1e-56 224.2 281 48.0
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 1.4e-56 223.8 284 47.9
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.4e-56 223.8 284 48.6
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 1.8e-56 223.4 303 45.9
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 1.8e-56 223.4 287 47.0
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 1.8e-56 223.4 287 47.0
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 1.8e-56 223.4 291 46.4
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 7.0e-56 221.5 292 46.9
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.2e-55 220.7 283 46.6
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 1.2e-55 220.7 280 46.8
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 5.9e-55 218.4 138 75.4
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 1.7e-54 216.9 294 45.9
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 1.7e-54 216.9 178 65.2
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 2.9e-54 216.1 280 47.1
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 6.6e-54 214.9 295 44.7
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 8.6e-54 214.5 334 40.4
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 3.3e-53 212.6 280 44.6
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 1.6e-52 210.3 309 43.0
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 6.1e-52 208.4 345 39.4
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 2.3e-51 206.5 299 43.8
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.3e-49 200.7 140 68.6
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 1.6e-47 193.7 285 43.5
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 3.5e-47 192.6 287 42.9
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 4.5e-47 192.2 171 57.9
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 6.6e-46 188.3 268 44.8
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 4.3e-45 185.7 291 40.5
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 5.6e-45 185.3 281 41.3
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 3.6e-44 182.6 291 39.5
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 6.8e-43 178.3 289 38.8
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.1e-40 171.0 196 51.0
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 1.9e-40 170.2 213 51.2
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 1.9e-40 170.2 155 53.5
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 2.4e-40 169.9 283 40.6
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 1.6e-39 167.2 276 39.1
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 2.0e-39 166.8 169 53.3
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 6.6e-38 161.8 220 47.3
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 4.7e-36 155.6 97 79.4
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 1.7e-33 147.1 319 33.9
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 2.7e-31 139.8 284 35.9
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 3.0e-30 136.3 282 37.2
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 5.1e-30 135.6 340 32.6
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 9.5e-29 131.3 348 31.6
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 1.4e-27 127.5 212 39.2
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 9.2e-24 114.8 283 32.9
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 8.6e-22 108.2 65 78.5
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 5.6e-21 105.5 198 37.9
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 2.8e-20 103.2 154 39.6
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 7.6e-18 95.1 61 73.8
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 7.1e-16 88.6 168 40.5
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 1.1e-13 81.3 238 27.7


User provided reference genes

Program Settings