Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 3.3e-262 907.9 478 100.0
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 9.4e-177 624.0 492 72.2
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 1.3e-170 603.6 508 67.9
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 2.5e-169 599.4 494 68.6
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 2.5e-161 572.8 490 66.3
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 4.0e-159 565.5 485 67.0
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 5.8e-158 561.6 479 63.0
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 8.3e-157 557.8 483 64.6
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 7.0e-156 554.7 457 65.6
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 3.0e-154 549.3 494 63.4
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 3.0e-154 549.3 491 62.7
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.5e-153 547.0 478 63.8
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 1.9e-153 546.6 490 65.3
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 4.3e-153 545.4 496 62.3
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 9.5e-153 544.3 485 63.9
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 2.1e-152 543.1 486 63.2
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 4.7e-152 542.0 492 61.4
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 8.1e-152 541.2 482 63.5
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 1.1e-151 540.8 482 62.7
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.3e-151 539.7 491 61.3
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 5.2e-151 538.5 491 61.7
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 8.9e-151 537.7 488 62.3
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 3.4e-150 535.8 492 61.6
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 3.4e-150 535.8 485 61.9
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 4.4e-150 535.4 505 62.6
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 5.8e-150 535.0 476 62.4
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 7.5e-150 534.6 489 62.4
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.7e-149 533.5 477 61.2
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 2.2e-149 533.1 476 62.0
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 2.9e-149 532.7 485 62.5
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 2.9e-149 532.7 471 64.1
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 4.9e-149 531.9 478 60.9
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 6.4e-149 531.6 489 62.8
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 1.9e-148 530.0 470 63.0
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 3.2e-148 529.3 489 62.0
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 2.7e-147 526.2 485 60.2
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 4.6e-147 525.4 482 60.4
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 7.8e-147 524.6 489 60.1
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 7.8e-147 524.6 489 62.4
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 1.0e-146 524.2 484 61.4
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 3.0e-146 522.7 477 61.0
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 6.6e-146 521.5 489 61.1
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 8.6e-146 521.2 487 60.4
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.5e-145 520.4 494 59.7
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 1.9e-145 520.0 500 60.8
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 2.5e-145 519.6 478 59.2
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 3.3e-145 519.2 487 60.8
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 3.3e-145 519.2 486 63.0
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 3.3e-145 519.2 471 59.2
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 4.3e-145 518.8 486 60.7
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 5.6e-145 518.5 483 60.2
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 1.2e-144 517.3 479 62.0
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 2.1e-144 516.5 486 61.3
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.8e-144 516.2 477 59.7
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 3.6e-144 515.8 472 59.7
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 4.7e-144 515.4 477 59.7
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.1e-143 514.2 444 63.5
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 1.4e-143 513.8 494 60.1
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 2.3e-143 513.1 483 60.0
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 4.0e-143 512.3 474 61.2
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 2.0e-142 510.0 467 59.3
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 7.6e-142 508.1 476 59.5
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 1.3e-141 507.3 490 59.2
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 3.7e-141 505.8 486 59.3
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 4.9e-141 505.4 478 60.7
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 1.4e-140 503.8 452 63.3
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 1.9e-140 503.4 488 58.8
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 3.2e-140 502.7 478 59.6
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 4.1e-140 502.3 485 59.8
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 1.2e-139 500.7 492 58.1
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 1.6e-139 500.4 478 58.8
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.6e-139 500.4 472 60.8
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 7.8e-139 498.0 478 59.6
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 7.8e-139 498.0 406 67.0
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 7.8e-139 498.0 471 58.6
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 2.3e-138 496.5 493 57.6
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 3.9e-138 495.7 471 57.3
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 2.5e-137 493.0 486 59.3
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 3.3e-137 492.7 485 58.4
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 1.2e-136 490.7 437 60.6
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 2.8e-136 489.6 487 58.7
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 4.7e-136 488.8 478 57.9
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 6.2e-136 488.4 478 57.9
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 8.1e-136 488.0 480 56.9
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.4e-135 487.3 492 57.9
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 1.8e-135 486.9 480 59.4
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 2.4e-135 486.5 495 56.2
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 3.1e-135 486.1 487 58.3
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 4.0e-135 485.7 468 58.3
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 8.9e-135 484.6 482 57.9
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 8.9e-135 484.6 492 56.7
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 8.9e-135 484.6 485 56.5
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 1.2e-134 484.2 477 58.7
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 1.5e-134 483.8 474 59.7
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 2.6e-134 483.0 488 58.4
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 5.8e-134 481.9 483 57.6
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 7.6e-134 481.5 474 59.1
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 1.3e-133 480.7 486 57.4
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 1.7e-133 480.3 494 56.5
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 3.8e-133 479.2 474 58.6
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 1.4e-132 477.2 476 56.5
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 1.4e-132 477.2 489 56.2
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 5.4e-132 475.3 468 56.4
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 7.1e-132 474.9 489 56.4
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 9.3e-132 474.6 478 57.7
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 1.6e-131 473.8 487 58.1
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 2.1e-131 473.4 490 56.9
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 4.6e-131 472.2 473 55.8
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.3e-130 469.9 488 53.1
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 1.1e-129 467.6 476 56.5
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 1.5e-129 467.2 390 63.8
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 1.9e-129 466.8 486 56.6
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.9e-129 466.8 492 56.9
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 2.5e-129 466.5 473 54.5
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 1.6e-128 463.8 394 64.5
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 2.8e-128 463.0 487 57.1
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 8.1e-128 461.5 472 55.1
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 5.3e-127 458.8 485 55.5
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 6.9e-127 458.4 426 60.1
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 2.6e-126 456.4 476 54.4
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 2.9e-125 453.0 470 54.3
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 7.1e-124 448.4 442 56.8
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 2.1e-123 446.8 466 54.7
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 2.7e-123 446.4 496 51.0
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.7e-123 446.4 399 61.7
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 2.3e-122 443.4 390 59.2
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 3.9e-122 442.6 472 54.2
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.1e-121 441.0 482 54.8
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.3e-121 439.1 313 71.6
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 4.3e-121 439.1 483 54.0
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 5.6e-121 438.7 480 52.9
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 9.6e-121 438.0 492 52.0
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 2.1e-120 436.8 472 52.8
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 8.1e-120 434.9 477 52.4
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 1.4e-119 434.1 477 52.2
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 1.8e-119 433.7 472 52.8
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 3.1e-119 433.0 452 53.8
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 6.9e-119 431.8 449 55.9
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 5.8e-118 428.7 474 53.0
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 5.8e-118 428.7 478 52.7
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 4.2e-116 422.5 487 52.4
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 3.0e-114 416.4 473 53.3
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 7.6e-110 401.7 413 56.4
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 1.4e-108 397.5 471 50.1
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.5e-105 386.7 283 67.8
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 2.5e-105 386.7 469 53.1
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 8.2e-104 381.7 384 53.4
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 5.1e-98 362.5 382 50.3
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 2.7e-91 340.1 447 43.0
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 3.7e-88 329.7 268 66.8
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 5.9e-78 295.8 345 48.1
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 1.5e-68 264.6 191 73.3
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 1.6e-62 244.6 347 42.1
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 2.0e-57 227.6 447 35.3
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 7.3e-52 209.1 192 62.0
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 6.4e-48 196.1 242 45.9
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 6.2e-43 179.5 144 64.6
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 9.2e-39 165.6 135 67.4
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 2.3e-37 161.0 360 35.0
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 2.5e-36 157.5 117 63.2
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 4.3e-36 156.8 126 67.5
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 5.6e-36 156.4 129 67.4
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 1.2e-35 155.2 142 63.4
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 9.8e-33 145.6 341 32.3
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 8.3e-32 142.5 99 65.7
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 1.4e-26 125.2 319 32.9
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 3.8e-24 117.1 99 56.6
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 1.9e-20 104.8 406 26.1
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 1.9e-20 104.8 177 38.4
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 1.9e-20 104.8 177 38.4
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 1.1e-15 89.0 312 31.7
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 4.2e-15 87.0 70 52.9
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 1.4e-10 72.0 107 51.4
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 6.9e-10 69.7 47 68.1
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 1.4e-07 62.0 53 62.3


User provided reference genes

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