Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4711 Erigeron canadensis HOM05D003128 ORTHO05D004333 1.2e-264 916.0 466 100.0
HanXRQChr16g0513231 Helianthus annuus HOM05D003128 ORTHO05D004333 3.5e-184 648.7 429 79.7
ECA238G0109 Erigeron canadensis HOM05D003128 ORTHO05D004333 2.3e-183 646.0 430 79.5
Lsat_1_v5_gn_8_13041 Lactuca sativa HOM05D003128 ORTHO05D004333 7.5e-179 630.9 441 76.9
Cc07_g16450 Coffea canephora HOM05D003128 ORTHO05D004333 3.2e-177 625.5 424 76.7
MD10G1028600 Malus domestica HOM05D003128 ORTHO05D004333 7.1e-177 624.4 424 75.2
MD05G1028000 Malus domestica HOM05D003128 ORTHO05D004333 1.6e-176 623.2 424 75.0
Peaxi162Scf00106g01318 Petunia axillaris HOM05D003128 ORTHO05D004333 1.6e-176 623.2 433 75.5
Migut.L00061 Erythranthe guttata HOM05D003128 ORTHO05D004333 3.5e-176 622.1 429 75.5
Dinv19469 Davidia involucrata HOM05D003128 ORTHO05D004333 6.0e-176 621.3 422 76.3
RcHm_v2.0_Chr2g0117351 Rosa chinensis HOM05D003128 ORTHO05D004333 1.3e-175 620.2 426 75.4
AUR62027168 Chenopodium quinoa HOM05D003128 ORTHO05D004333 3.0e-175 619.0 433 73.7
Eucgr.H04882 Eucalyptus grandis HOM05D003128 ORTHO05D004333 3.0e-175 619.0 429 74.4
FvH4_1g22910 Fragaria vesca HOM05D003128 ORTHO05D004333 3.0e-175 619.0 426 74.4
FAN19G0581 Fragaria x ananassa HOM05D003128 ORTHO05D004333 3.0e-175 619.0 426 74.4
Manes.12G143800 Manihot esculenta HOM05D003128 ORTHO05D004333 3.9e-175 618.6 419 76.6
Thecc.01G115300 Theobroma cacao HOM05D003128 ORTHO05D004333 5.1e-175 618.2 433 75.1
TAR633G2583 Trochodendron aralioides HOM05D003128 ORTHO05D004333 5.1e-175 618.2 429 74.8
MELO3C007466.2 Cucumis melo HOM05D003128 ORTHO05D004333 6.6e-175 617.8 424 75.5
MSTRG.15756 Avicennia marina HOM05D003128 ORTHO05D004333 8.6e-175 617.5 424 75.9
Gorai.008G101500 Gossypium raimondii HOM05D003128 ORTHO05D004333 1.1e-174 617.1 433 73.9
FAN23G1907 Fragaria x ananassa HOM05D003128 ORTHO05D004333 1.5e-174 616.7 426 74.4
Gohir.D12G093500 Gossypium hirsutum HOM05D003128 ORTHO05D004333 1.5e-174 616.7 433 73.9
CsaV3_6G042250 Cucumis sativus L. HOM05D003128 ORTHO05D004333 1.9e-174 616.3 424 75.2
Prupe.6G169200 Prunus persica HOM05D003128 ORTHO05D004333 2.5e-174 615.9 424 74.8
FAN26G0239 Fragaria x ananassa HOM05D003128 ORTHO05D004333 3.3e-174 615.5 426 74.2
TAR376G0247 Trochodendron aralioides HOM05D003128 ORTHO05D004333 3.3e-174 615.5 433 74.4
Duzib147G1643 Durio zibethinus HOM05D003128 ORTHO05D004333 4.3e-174 615.1 433 74.1
QL06p031715 Quercus lobata HOM05D003128 ORTHO05D004333 4.3e-174 615.1 427 74.9
CSS0050242 Camellia sinensis var. sinensis HOM05D003128 ORTHO05D004333 1.2e-173 613.6 425 75.3
Gohir.A12G092500 Gossypium hirsutum HOM05D003128 ORTHO05D004333 1.6e-173 613.2 424 74.5
DCAR_001378 Daucus carota HOM05D003128 ORTHO05D004333 2.8e-173 612.5 429 74.4
Potri.007G079300 Populus trichocarpa HOM05D003128 ORTHO05D004333 2.8e-173 612.5 423 74.7
PGR102G2018 Punica granatum HOM05D003128 ORTHO05D004333 3.6e-173 612.1 426 73.9
Lj4g0009219 Lotus japonicus HOM05D003128 ORTHO05D004333 4.7e-173 611.7 421 75.3
GSVIVG01022250001 Vitis vinifera HOM05D003128 ORTHO05D004333 6.2e-173 611.3 425 74.4
CiPaw.04G090100 Carya illinoinensis HOM05D003128 ORTHO05D004333 8.1e-173 610.9 426 73.7
Sed0019648 Sechium edule HOM05D003128 ORTHO05D004333 1.8e-172 609.8 424 74.3
Lalb_Chr12g0203461 Lupinus albus HOM05D003128 ORTHO05D004333 2.3e-172 609.4 429 73.2
CANSAT01G0023 Cannabis sativa HOM05D003128 ORTHO05D004333 4.0e-172 608.6 424 73.1
Atru.chr4.452 Acer truncatum HOM05D003128 ORTHO05D004333 5.2e-172 608.2 422 74.9
SalBow5G4213 Salvia bowleyana HOM05D003128 ORTHO05D004333 1.2e-171 607.1 429 73.7
Solyc04g051670.3 Solanum lycopersicum HOM05D003128 ORTHO05D004333 1.2e-171 607.1 433 73.2
Sopen04g023030 Solanum pennellii HOM05D003128 ORTHO05D004333 1.2e-171 607.1 433 73.2
Potri.005G085600 Populus trichocarpa HOM05D003128 ORTHO05D004333 2.0e-171 606.3 423 74.0
Aqoxy6G00440 Aquilegia oxysepala HOM05D003128 ORTHO05D004333 3.4e-171 605.5 430 71.2
Glyma.08G143000 Glycine max HOM05D003128 ORTHO05D004333 3.4e-171 605.5 428 72.9
Sc07g0006800 Simmondsia chinensis HOM05D003128 ORTHO05D004333 3.4e-171 605.5 425 73.6
arahy.Tifrunner.gnm1.ann1.FV7J2W Arachis hypogaea HOM05D003128 ORTHO05D004333 5.8e-171 604.7 430 73.0
Cpa.g.sc566.1 Carica papaya HOM05D003128 ORTHO05D004333 5.8e-171 604.7 422 75.4
ECA236G3821 Erigeron canadensis HOM05D003128 ORTHO05D004333 6.4e-170 601.3 381 82.9
Sabra07G0066500 Salix brachista HOM05D003128 ORTHO05D004333 6.4e-170 601.3 433 72.5
Glyma.05G185000 Glycine max HOM05D003128 ORTHO05D004333 8.3e-170 600.9 428 72.0
Ciclev10024790m.g Citrus clementina HOM05D003128 ORTHO05D004333 3.2e-169 599.0 421 73.9
Phvul.002G265804 Phaseolus vulgaris HOM05D003128 ORTHO05D004333 5.4e-169 598.2 425 72.2
EL10Ac6g14775 Beta vulgaris HOM05D003128 ORTHO05D004333 7.1e-169 597.8 432 73.1
CAN.G997.5 Capsicum annuum HOM05D003128 ORTHO05D004333 9.2e-169 597.4 433 73.0
VMungo0251G0175 Vigna mungo HOM05D003128 ORTHO05D004333 1.6e-168 596.7 428 71.5
TWI75G1035 Tripterygium wilfordii HOM05D003128 ORTHO05D004333 3.5e-168 595.5 421 72.2
Nn3g18602 Nelumbo nucifera HOM05D003128 ORTHO05D004333 4.6e-168 595.1 428 73.6
PSO675G2461 Papaver somniferum HOM05D003128 ORTHO05D004333 3.0e-167 592.4 433 69.7
THA.LOC104819600 Tarenaya hassleriana HOM05D003128 ORTHO05D004333 5.1e-167 591.7 422 72.5
Ca_17686_v3 Cicer arietinum L. HOM05D003128 ORTHO05D004333 1.5e-166 590.1 427 70.5
vmacro18643 Vaccinium macrocarpon HOM05D003128 ORTHO05D004333 1.9e-166 589.7 479 67.2
PSO541G0298 Papaver somniferum HOM05D003128 ORTHO05D004333 4.3e-166 588.6 433 69.3
Zm00001eb344750 Zea mays HOM05D003128 ORTHO05D004333 4.3e-166 588.6 432 69.9
Cfa002768 Carpinus fangiana HOM05D003128 ORTHO05D004333 7.3e-166 587.8 410 75.1
Oeu054942.1 Olea europaea HOM05D003128 ORTHO05D004333 7.3e-166 587.8 429 71.3
BcaC07g40165 Brassica carinata HOM05D003128 ORTHO05D004333 9.6e-166 587.4 419 71.6
CDE06G1969 Ceratophyllum demersum HOM05D003128 ORTHO05D004333 1.6e-165 586.6 429 71.1
Ah.03g141630 Amaranthus hybridus HOM05D003128 ORTHO05D004333 2.8e-165 585.9 433 70.4
C08p33490 Brassica napus HOM05D003128 ORTHO05D004333 2.8e-165 585.9 419 71.8
A08p33940 Brassica napus HOM05D003128 ORTHO05D004333 8.1e-165 584.3 419 71.6
A09p50770 Brassica napus HOM05D003128 ORTHO05D004333 8.1e-165 584.3 427 70.7
AT3G57940 Arabidopsis thaliana HOM05D003128 ORTHO05D004333 1.1e-164 583.9 419 71.8
BraA09t40524Z Brassica rapa HOM05D003128 ORTHO05D004333 1.1e-164 583.9 427 70.7
Carub.0005s2478 Capsella rubella HOM05D003128 ORTHO05D004333 1.1e-164 583.9 419 71.4
Rhsim08G0005200 Rhododendron simsii HOM05D003128 ORTHO05D004333 1.1e-164 583.9 439 71.1
AL5G39590 Arabidopsis lyrata HOM05D003128 ORTHO05D004333 1.4e-164 583.6 419 71.6
Sp5g04780 Schrenkiella parvula HOM05D003128 ORTHO05D004333 1.8e-164 583.2 419 71.6
Psat7g050400 Pisum sativum HOM05D003128 ORTHO05D004333 2.4e-164 582.8 429 69.9
Hund19633 Selenicereus undatus HOM05D003128 ORTHO05D004333 3.1e-164 582.4 430 71.4
TPR.G2212 Trifolium pratense HOM05D003128 ORTHO05D004333 4.0e-164 582.0 429 69.9
BraA08t35308Z Brassica rapa HOM05D003128 ORTHO05D004333 5.2e-164 581.6 419 71.4
CARHR168240 Cardamine hirsuta HOM05D003128 ORTHO05D004333 8.9e-164 580.9 419 71.1
Thhalv10006661m.g Eutrema salsugineum HOM05D003128 ORTHO05D004333 8.9e-164 580.9 419 71.4
Aa31LG2G10270 Aethionema arabicum HOM05D003128 ORTHO05D004333 1.5e-163 580.1 419 70.9
unitig_37.g12839 Utricularia gibba HOM05D003128 ORTHO05D004333 2.6e-163 579.3 429 70.2
Medtr8g092060 Medicago truncatula HOM05D003128 ORTHO05D004333 3.4e-163 578.9 429 70.4
Sp1g09120 Schrenkiella parvula HOM05D003128 ORTHO05D004333 3.4e-163 578.9 419 71.4
C08p13730 Brassica napus HOM05D003128 ORTHO05D004333 4.4e-163 578.6 419 70.9
BolC8t49008H Brassica oleracea HOM05D003128 ORTHO05D004333 4.4e-163 578.6 419 70.9
Thhalv10005765m.g Eutrema salsugineum HOM05D003128 ORTHO05D004333 5.8e-163 578.2 419 70.6
AT1G10490 Arabidopsis thaliana HOM05D003128 ORTHO05D004333 1.3e-162 577.0 419 71.1
Aa31LG1G4460 Aethionema arabicum HOM05D003128 ORTHO05D004333 1.7e-162 576.6 421 71.0
SalBow5G5535 Salvia bowleyana HOM05D003128 ORTHO05D004333 2.9e-162 575.9 433 71.8
CARHR010630 Cardamine hirsuta HOM05D003128 ORTHO05D004333 4.9e-162 575.1 419 70.4
AL1G21290 Arabidopsis lyrata HOM05D003128 ORTHO05D004333 6.4e-162 574.7 419 70.9
SalBow5G3190 Salvia bowleyana HOM05D003128 ORTHO05D004333 1.1e-161 573.9 433 71.6
Carub.0001s0992 Capsella rubella HOM05D003128 ORTHO05D004333 9.3e-161 570.9 419 69.9
Nitab4.5_0001532g0050 Nicotiana tabacum HOM05D003128 ORTHO05D004333 3.5e-160 568.9 429 71.8
ATR1120G197 Amborella trichopoda HOM05D003128 ORTHO05D004333 7.8e-160 567.8 426 69.2
Haze_25061 Corylus avellana HOM05D003128 ORTHO05D004333 3.6e-157 558.9 467 65.5
Nitab4.5_0000184g0230 Nicotiana tabacum HOM05D003128 ORTHO05D004333 1.4e-156 557.0 433 70.2
PSO017G2724 Papaver somniferum HOM05D003128 ORTHO05D004333 2.4e-156 556.2 433 66.5
HPP92_027496 Vanilla planifolia HOM05D003128 ORTHO05D004333 9.9e-155 550.8 421 66.7
SGA_v2.0_scaffold47G17695 Striga asiatica HOM05D003128 ORTHO05D004333 4.9e-154 548.5 556 57.0
HPP92_027495 Vanilla planifolia HOM05D003128 ORTHO05D004333 4.9e-154 548.5 423 66.2
SMO364G0954 Selaginella moellendorffii HOM05D003128 ORTHO05D004333 1.1e-153 547.4 431 65.0
HPP92_008448 Vanilla planifolia HOM05D003128 ORTHO05D004333 1.4e-153 547.0 423 66.0
Sabra05G0070500 Salix brachista HOM05D003128 ORTHO05D004333 9.3e-153 544.3 374 75.1
Mapoly0031s0153 Marchantia polymorpha HOM05D003128 ORTHO05D004333 2.7e-152 542.7 425 64.7
SalBow1G7304 Salvia bowleyana HOM05D003128 ORTHO05D004333 6.6e-151 538.1 483 63.1
Manes.01G261100 Manihot esculenta HOM05D003128 ORTHO05D004333 1.9e-150 536.6 419 66.3
SHI11304 Sapria himalayana HOM05D003128 ORTHO05D004333 2.5e-150 536.2 429 65.5
Lju50C14G5 Lonicera japonica HOM05D003128 ORTHO05D004333 2.1e-149 533.1 375 74.4
PGSC0003DMG400031195 Solanum tuberosum HOM05D003128 ORTHO05D004333 2.1e-149 533.1 370 75.1
Glyma.13G362700 Glycine max HOM05D003128 ORTHO05D004333 4.8e-149 531.9 436 67.7
CSS0032353 Camellia sinensis var. sinensis HOM05D003128 ORTHO05D004333 8.1e-149 531.2 426 64.6
CBR_g45300 Chara braunii HOM05D003128 ORTHO05D004333 5.3e-148 528.5 433 62.4
CSS0015093 Camellia sinensis var. sinensis HOM05D003128 ORTHO05D004333 1.2e-147 527.3 451 61.9
Medtr2g028030 Medicago truncatula HOM05D003128 ORTHO05D004333 2.6e-147 526.2 437 65.4
Nitab4.5_0003588g0040 Nicotiana tabacum HOM05D003128 ORTHO05D004333 6.4e-146 521.5 394 69.5
BcaC07g38605 Brassica carinata HOM05D003128 ORTHO05D004333 9.3e-145 517.7 419 66.3
MELO3C015101.2 Cucumis melo HOM05D003128 ORTHO05D004333 4.6e-144 515.4 428 63.1
ClCG03G016370 Citrullus lanatus HOM05D003128 ORTHO05D004333 1.5e-142 510.4 436 63.1
Rhsim08G0031600 Rhododendron simsii HOM05D003128 ORTHO05D004333 1.6e-141 506.9 431 63.6
Sed0015537 Sechium edule HOM05D003128 ORTHO05D004333 8.1e-141 504.6 436 60.8
Sed0011569 Sechium edule HOM05D003128 ORTHO05D004333 1.4e-140 503.8 420 63.3
Cre03.g192850 Chlamydomonas reinhardtii HOM05D003128 ORTHO05D004333 1.2e-139 500.7 441 58.7
Cc02_g23680 Coffea canephora HOM05D003128 ORTHO05D004333 3.4e-139 499.2 484 57.4
MCO04G276 Micromonas commoda HOM05D003128 ORTHO05D004333 7.1e-137 491.5 426 59.6
Nitab4.5_0000110g0210 Nicotiana tabacum HOM05D003128 ORTHO05D004333 7.9e-136 488.0 367 71.4
MELO3C015382.2 Cucumis melo HOM05D003128 ORTHO05D004333 1.3e-135 487.3 468 56.8
EL10Ac8g20517 Beta vulgaris HOM05D003128 ORTHO05D004333 2.5e-134 483.0 418 62.0
CAN.G710.3 Capsicum annuum HOM05D003128 ORTHO05D004333 1.6e-133 480.3 356 73.6
PRCOL_00004456 Prasinoderma coloniale HOM05D003128 ORTHO05D004333 1.2e-131 474.2 427 57.6
EL10Ac8g20519 Beta vulgaris HOM05D003128 ORTHO05D004333 5.0e-130 468.8 416 61.1
HPP92_008449 Vanilla planifolia HOM05D003128 ORTHO05D004333 2.5e-126 456.4 418 58.6
Actinidia04640 Actinidia chinensis HOM05D003128 ORTHO05D004333 2.1e-120 436.8 320 72.2
Pp3c5_20530 Physcomitrium patens HOM05D003128 ORTHO05D004333 2.8e-117 426.4 314 70.1
vmacro18430 Vaccinium macrocarpon HOM05D003128 ORTHO05D004333 9.7e-102 374.8 577 43.0
Actinidia12215 Actinidia chinensis HOM05D003128 ORTHO05D004333 8.0e-96 355.1 318 65.4
Manes.12G144101 Manihot esculenta HOM05D003128 ORTHO05D004333 1.8e-84 317.4 247 67.6
SEGI_25321 Sequoiadendron giganteum HOM05D003128 ORTHO05D004333 2.9e-69 266.9 207 66.2
Haze_27374 Corylus avellana HOM05D003128 ORTHO05D004333 4.9e-69 266.2 291 49.5
FvH4_5g28550 Fragaria vesca HOM05D003128 ORTHO05D017009 2.7e-59 233.8 200 66.5
FAN12G2314 Fragaria x ananassa HOM05D003128 ORTHO05D017009 1.7e-58 231.1 200 66.0
COL.COLO4_10987 Corchorus olitorius HOM05D003128 ORTHO05D004333 6.2e-56 222.6 153 73.9
Sed0009581 Sechium edule HOM05D003128 ORTHO05D004333 3.9e-50 203.4 186 57.5
MBI01_g28993_MAGBIO Magnolia biondii HOM05D003128 ORTHO05D004333 5.1e-50 203.0 150 68.0
FvH4_3g27400 Fragaria vesca HOM05D003128 ORTHO05D017009 1.9e-49 201.1 200 61.5
FvH4_6g25830 Fragaria vesca HOM05D003128 ORTHO05D017009 1.3e-34 151.8 123 65.0
Gohir.A11G182401 Gossypium hirsutum HOM05D003128 ORTHO05D017009 6.6e-34 149.4 107 72.9
Gohir.D07G214150 Gossypium hirsutum HOM05D003128 ORTHO05D017009 6.6e-34 149.4 107 72.9
Gohir.D13G012301 Gossypium hirsutum HOM05D003128 ORTHO05D017009 6.6e-34 149.4 107 72.9
Gorai.011G112600 Gossypium raimondii HOM05D003128 ORTHO05D017009 6.6e-34 149.4 107 72.9
ECA236G3006 Erigeron canadensis HOM05D003128 ORTHO05D004333 8.7e-34 149.1 91 87.9
CAN.G807.5 Capsicum annuum HOM05D003128 ORTHO05D000002 5.8e-30 136.3 106 67.9
Haze_27303 Corylus avellana HOM05D003128 ORTHO05D004333 1.5e-25 121.7 120 55.0
FvH4_4g11010 Fragaria vesca HOM05D003128 ORTHO05D017009 1.9e-25 121.3 111 62.2
Actinidia28779 Actinidia chinensis HOM05D003128 ORTHO05D004333 5.6e-25 119.8 188 43.6
FvH4_6g25650 Fragaria vesca HOM05D003128 ORTHO05D017009 3.7e-24 117.1 111 57.7
SHI09338 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-23 112.8 84 69.0
SEGI_13299 Sequoiadendron giganteum HOM05D003128 ORTHO05D004333 9.0e-23 112.5 76 73.7
EL10Ac3g06887 Beta vulgaris HOM05D003128 ORTHO05D004333 1.2e-22 112.1 88 67.0
CsaV3_1G042320 Cucumis sativus L. HOM05D003128 ORTHO05D001951 1.4e-20 105.1 113 53.1
Ca_06018_v3 Cicer arietinum L. HOM05D003128 ORTHO05D000188 6.7e-18 96.3 58 84.5
Ca_28099_v3 Cicer arietinum L. HOM05D001478 ORTHO05D002240 8.2e-16 89.4 71 66.2
FAN12G1901 Fragaria x ananassa HOM05D013944 ORTHO05D208954 2.4e-15 87.8 170 39.4
Lsat_1_v5_gn_8_1381 Lactuca sativa HOM05D003128 ORTHO05D004333 1.5e-14 85.1 72 65.3
FAN16G0152 Fragaria x ananassa HOM05D002614 ORTHO05D002794 3.4e-14 84.0 103 51.5
FAN16G2229 Fragaria x ananassa HOM05D002614 ORTHO05D002794 3.4e-14 84.0 103 51.5
Actinidia12216 Actinidia chinensis HOM05D003128 ORTHO05D038025 5.9e-14 83.2 86 54.7
Sc07g0004070 Simmondsia chinensis HOM05D003128 ORTHO05D038006 2.9e-13 80.9 57 66.7
Actinidia33579 Actinidia chinensis HOM05D003128 ORTHO05D004333 3.8e-13 80.5 60 68.3
Ca_22355_v3 Cicer arietinum L. HOM05D000295 ORTHO05D000188 3.6e-11 73.9 52 71.2
Actinidia33580 Actinidia chinensis HOM05D003128 ORTHO05D038006 8.7e-10 69.3 87 51.7
QL02p014306 Quercus lobata HOM05D003128 ORTHO05D037442 1.6e-08 65.1 62 62.9
Rhsim08G0031400 Rhododendron simsii HOM05D003331 ORTHO05D003264 1.2e-06 58.9 44 70.5
SHI39228 Sapria himalayana HOM05D003128 ORTHO05D000778 2.0e-06 58.2 43 62.8
SHI45136 Sapria himalayana HOM05D003128 ORTHO05D004333 2.0e-06 58.2 120 35.8
SHI48834 Sapria himalayana HOM05D008459 ORTHO05D003903 2.0e-06 58.2 43 62.8


User provided reference genes

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