Gene: AT3G57940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G57940
  • Transcript Identifier AT3G57940.1
  • Gene Type Coding gene
  • Location Chr3 : 21449560-21455834 : positive

Gene Family Information

  • ID HOM05D003128
  • #Genes/#Species 219/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G57940.1
  • uniprot Q9M2Q4

Descriptions

  • Description GNAT acetyltransferase (DUF699)
  • Computational description CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT1G10490.1); Has 1409 Blast hits to 1357 proteins in 630 species: Archae - 151; Bacteria - 717; Metazoa - 171; Fungi - 150; Plants - 51; Viruses - 3; Other Eukaryotes - 166 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034470
IEA
GOA DatabasencRNA processing
GO:0016072
IEA
GOA DatabaserRNA metabolic process
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0000154
IEA
GOA DatabaserRNA modification
GO:0051391
IEA
GOA DatabasetRNA acetylation
GO:0042274
IEA
GOA Databaseribosomal small subunit biogenesis
GO:1904812
IBA
Gene OntologyrRNA acetylation involved in maturation of SSU-rRNA1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0008080
IEA
GOA DatabaseN-acetyltransferase activity
GO:0008080
IEA
InterProN-acetyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000049
IBA
Gene OntologytRNA binding1
GO:1990883
IBA
Gene OntologyrRNA cytidine N-acetyltransferase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IBA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007807 Helicase domain
IPR032672 TmcA/NAT10/Kre33
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR027992 Possible tRNA binding domain
IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
IPR000182 GNAT domain
Mapman id Description
16.5.9.1 RNA processing.RNA modification.acetylation.tRNA/rRNA cytidine acetyltransferase