Gene: PGSC0003DMG400031195

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400031195
  • Transcript Identifier PGSC0003DMT400080123
  • Gene Type Coding gene
  • Location ST4.03ch04 : 54643357-54656853 : negative

Gene Family Information

  • ID HOM05D003128
  • #Genes/#Species 219/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37474746
  • id PGSC0003DMG400031195.v4.03
  • uniprot M1D312

Descriptions

  • Description Conserved gene of unknown function
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904812
IBA
GOA DatabaserRNA acetylation involved in maturation of SSU-rRNA
GO:0034470
IEA
GOA DatabasencRNA processing
GO:0016072
IEA
GOA DatabaserRNA metabolic process
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0000154
IEA
GOA DatabaserRNA modification
GO:0051391
IEA
GOA DatabasetRNA acetylation
GO:0042274
IEA
GOA Databaseribosomal small subunit biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000049
IBA
GOA DatabasetRNA binding
GO:1990883
IBA
GOA DatabaserRNA cytidine N-acetyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0008080
IEA
GOA DatabaseN-acetyltransferase activity
GO:0008080
IEA
InterProN-acetyltransferase activity
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032672 TmcA/NAT10/Kre33
IPR000182 GNAT domain
IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
IPR007807 Helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
16.5.9.1 RNA processing.RNA modification.acetylation.tRNA/rRNA cytidine acetyltransferase