Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 3.0e-160 568.5 304 100.0
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 6.8e-104 381.3 308 71.8
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 5.9e-100 368.2 314 70.4
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 8.3e-78 294.7 319 58.9
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 8.6e-75 284.6 312 56.4
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 9.6e-74 281.2 343 54.5
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 8.9e-72 274.6 316 56.0
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.4e-71 272.7 324 52.8
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 5.8e-71 271.9 312 53.8
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.2e-70 270.0 322 55.0
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 2.2e-70 270.0 309 56.0
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 8.4e-70 268.1 310 55.2
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 1.4e-69 267.3 367 48.2
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 2.4e-69 266.5 329 51.4
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 2.4e-69 266.5 332 53.3
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.2e-69 266.2 402 46.5
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 4.2e-69 265.8 316 55.1
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 5.4e-69 265.4 328 53.0
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 1.2e-68 264.2 330 53.9
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 2.7e-68 263.1 310 53.5
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.7e-68 263.1 330 53.0
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 4.6e-68 262.3 327 52.3
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 1.7e-67 260.4 305 54.8
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 3.9e-67 259.2 311 54.7
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.1e-66 257.7 330 51.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.1e-66 257.7 311 52.4
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.1e-66 257.7 333 52.3
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 1.5e-66 257.3 356 50.6
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.9e-66 256.9 309 54.0
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.9e-66 256.9 312 52.9
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 2.5e-66 256.5 312 52.6
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 9.6e-66 254.6 328 50.9
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.3e-65 254.2 320 52.5
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 2.8e-65 253.1 380 48.2
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 6.2e-65 251.9 333 48.9
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 6.2e-65 251.9 336 51.5
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 1.8e-64 250.4 311 53.4
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 5.3e-64 248.8 330 47.9
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 2.0e-63 246.9 311 51.8
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.6e-63 246.5 289 55.0
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 2.6e-63 246.5 334 50.3
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 3.4e-63 246.1 333 47.7
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 4.4e-63 245.7 345 49.9
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.9e-61 240.4 340 50.0
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 3.2e-61 239.6 345 49.9
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 1.2e-60 237.7 344 49.1
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 3.5e-60 236.1 307 49.2
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.3e-59 234.2 317 48.9
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 5.1e-59 232.3 297 50.2
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.1e-58 231.1 326 46.9
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 1.1e-58 231.1 326 47.2
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 1.1e-58 231.1 310 48.7
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.1e-58 231.1 298 51.0
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.9e-58 230.3 310 49.4
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.3e-58 229.6 312 49.4
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 1.3e-57 227.6 360 44.7
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 2.1e-57 226.9 353 45.9
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.1e-56 224.6 310 48.4
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.8e-56 223.8 309 49.2
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 3.1e-56 223.0 334 46.1
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 1.2e-55 221.1 350 45.1
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 1.5e-55 220.7 323 48.3
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.8e-55 218.8 336 47.9
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 9.9e-55 218.0 333 45.6
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 3.8e-54 216.1 330 46.1
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.2e-53 212.6 285 50.2
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 2.1e-52 210.3 353 44.8
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 2.7e-52 209.9 281 49.5
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 3.5e-52 209.5 273 50.5
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 2.5e-50 203.4 366 41.5
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 3.1e-48 196.4 364 42.9
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 9.0e-48 194.9 367 42.2
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 2.0e-47 193.7 279 46.2
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 5.8e-47 192.2 323 44.6
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 8.4e-46 188.3 310 44.2
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.9e-45 187.2 268 49.6
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 5.5e-45 185.7 283 46.6
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 4.6e-44 182.6 333 44.1
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 1.3e-43 181.0 303 45.2
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 6.7e-43 178.7 368 38.9
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.5e-42 177.6 393 38.2
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.7e-41 172.9 139 71.2
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 4.8e-41 172.6 311 43.4
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 6.2e-41 172.2 246 49.6
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 6.2e-41 172.2 246 49.6
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 2.0e-39 167.2 257 44.4
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 2.6e-39 166.8 257 47.9
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 3.4e-39 166.4 256 46.9
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 4.5e-39 166.0 256 44.9
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 7.6e-39 165.2 277 41.9
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 3.8e-38 162.9 357 38.7
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 3.8e-38 162.9 242 47.5
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 3.8e-38 162.9 242 47.5
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 3.8e-38 162.9 224 47.3
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 8.4e-38 161.8 366 36.9
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 3.2e-37 159.8 259 46.3
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 3.2e-37 159.8 373 37.3
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.3e-35 154.5 247 45.7
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.3e-35 154.5 381 34.9
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.6e-33 147.5 333 37.2
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 4.8e-33 146.0 381 34.9
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 6.3e-33 145.6 287 43.2
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 4.5e-31 139.4 179 50.8
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.7e-30 137.5 278 40.3
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.2e-28 131.3 156 57.1
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 2.7e-28 130.2 198 42.9
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.4e-27 127.9 131 55.0
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.4e-27 127.9 252 40.1
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 5.1e-27 125.9 364 34.1
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 8.8e-27 125.2 103 74.8
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 4.3e-26 122.9 154 51.9
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 1.7e-25 120.9 269 37.2
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.2e-25 118.6 135 53.3
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 6.9e-24 115.5 135 53.3
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 2.6e-23 113.6 124 58.1
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 2.2e-22 110.5 167 48.5
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.2e-21 105.5 101 64.4
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.2e-21 105.5 101 64.4
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 1.3e-17 94.7 134 46.3
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 2.2e-17 94.0 67 67.2
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 6.3e-17 92.4 126 44.4
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 1.1e-16 91.7 64 67.2
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.6e-15 87.0 66 66.7
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 2.6e-10 70.5 114 36.0
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 7.5e-10 68.9 145 38.6
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 7.7e-07 58.9 152 33.6
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.8e-06 56.6 39 69.2
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.8e-06 56.6 39 69.2


User provided reference genes

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