Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.5e-261 905.6 451 100.0
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 4.2e-211 738.0 461 79.8
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 5.4e-198 694.5 471 74.7
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.0e-164 583.9 482 64.1
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 6.9e-161 571.2 483 63.1
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.3e-156 557.0 476 61.8
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 2.0e-152 543.1 489 58.5
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.6e-152 542.7 470 60.0
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 4.5e-152 542.0 468 60.5
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 5.8e-152 541.6 476 60.7
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 5.8e-152 541.6 468 60.5
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 7.6e-152 541.2 471 60.1
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.3e-151 540.4 485 59.2
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 1.7e-151 540.0 463 61.1
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 2.2e-151 539.7 468 61.1
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 4.9e-151 538.5 485 59.2
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 1.9e-150 536.6 484 60.7
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 4.2e-150 535.4 471 60.1
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 5.4e-150 535.0 468 60.0
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 2.1e-149 533.1 454 63.0
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.1e-149 533.1 473 60.9
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 8.7e-148 527.7 466 59.2
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.1e-147 527.3 464 60.1
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.5e-147 526.9 473 60.5
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 3.3e-147 525.8 461 60.5
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 4.3e-147 525.4 462 61.0
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 4.3e-147 525.4 509 56.8
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 7.4e-147 524.6 498 56.4
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 7.4e-147 524.6 448 60.7
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 2.8e-146 522.7 430 62.1
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 4.8e-146 521.9 469 57.8
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.8e-145 520.0 461 59.2
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 6.9e-145 518.1 434 62.2
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.0e-144 516.5 467 57.4
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.3e-143 513.8 508 54.7
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 3.8e-143 512.3 451 59.0
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 4.9e-143 511.9 467 56.7
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 8.4e-143 511.1 460 56.5
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 8.4e-143 511.1 447 61.5
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.1e-142 510.8 460 57.0
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 1.9e-142 510.0 470 56.8
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 1.9e-142 510.0 476 56.5
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 7.1e-142 508.1 397 66.8
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.1e-141 506.5 485 56.7
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 4.6e-141 505.4 467 56.7
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 6.0e-141 505.0 477 57.2
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 6.0e-141 505.0 462 57.6
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.0e-141 505.0 463 57.9
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.8e-140 503.4 465 57.2
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 2.3e-140 503.1 468 56.8
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 6.7e-140 501.5 471 56.5
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 8.7e-140 501.1 471 55.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 1.9e-139 500.0 442 58.8
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 4.3e-139 498.8 456 57.2
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 1.6e-138 496.9 483 56.5
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 6.2e-138 495.0 453 56.7
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 8.2e-138 494.6 456 56.4
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 8.2e-138 494.6 455 58.5
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 6.9e-137 491.5 453 57.2
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 1.2e-136 490.7 458 56.8
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 1.5e-136 490.3 446 57.2
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 2.6e-136 489.6 456 56.1
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.4e-136 489.2 445 57.5
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 5.8e-136 488.4 470 56.6
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 7.6e-136 488.0 459 56.2
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 7.6e-136 488.0 430 57.7
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.0e-135 487.6 420 58.1
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 1.7e-135 486.9 459 56.4
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 4.9e-135 485.3 458 55.9
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 4.9e-135 485.3 445 58.7
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 2.5e-134 483.0 473 55.4
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.5e-134 483.0 464 55.0
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 7.1e-134 481.5 470 54.9
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 9.3e-134 481.1 427 57.1
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 1.6e-133 480.3 465 55.1
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 7.9e-133 478.0 457 54.7
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 2.3e-132 476.5 421 57.7
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.3e-131 472.6 400 60.0
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 7.4e-131 471.5 467 53.7
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 7.4e-131 471.5 568 47.2
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 9.7e-131 471.1 447 55.9
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 9.7e-131 471.1 458 54.1
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 2.8e-130 469.5 379 62.5
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 4.8e-130 468.8 476 53.2
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 3.8e-127 459.1 464 54.7
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.2e-126 455.7 446 54.3
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.2e-125 454.1 364 65.1
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 5.1e-124 448.7 363 64.2
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 5.1e-124 448.7 529 48.2
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.7e-122 443.7 451 53.4
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 4.8e-122 442.2 462 52.2
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 5.0e-119 432.2 331 66.8
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 4.8e-114 415.6 451 49.9
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 2.6e-107 393.3 352 60.2
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 2.6e-107 393.3 352 60.2
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 8.2e-106 388.3 421 52.5
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 4.2e-102 375.9 421 48.7
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 8.3e-98 361.7 277 64.3
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.7e-95 354.0 482 42.1
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 1.7e-90 337.4 454 43.2
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 4.8e-90 335.9 290 61.4
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 4.0e-84 316.2 338 50.0
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 4.9e-82 309.3 260 58.8
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.7e-79 300.8 235 63.0
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 5.0e-79 299.3 355 46.5
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.1e-73 281.6 481 38.3
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 2.7e-72 276.9 401 42.6
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.3e-71 274.6 494 36.0
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 3.9e-71 273.1 234 57.7
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.7e-63 247.7 349 42.4
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.1e-62 245.0 234 57.3
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 3.5e-56 223.4 301 43.2
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 5.8e-51 206.1 276 46.4
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 3.0e-47 193.7 183 55.2
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 2.4e-41 174.1 166 53.0
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.4e-41 174.1 220 48.2
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 3.5e-40 170.2 162 56.8
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 3.5e-40 170.2 162 56.8
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.0e-39 167.2 149 55.0
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 2.8e-37 160.6 439 28.7
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 2.4e-36 157.5 139 54.7
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 6.4e-34 149.4 189 42.9
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 7.1e-33 146.0 181 49.2
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 6.7e-31 139.4 107 69.2
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.9e-26 124.0 118 57.6
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 4.5e-19 100.1 168 36.3
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.3e-14 84.0 69 65.2
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.7e-14 83.2 57 66.7
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-13 81.6 57 66.7
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 2.0e-11 74.7 112 42.0
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.4e-11 73.9 93 48.4
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 7.7e-11 72.8 63 54.0


User provided reference genes

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