Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 1.1e-153 546.6 282 100.0
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 2.5e-145 518.8 282 95.4
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 3.3e-145 518.5 280 95.4
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 1.1e-143 513.5 282 94.3
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 1.1e-140 503.4 277 93.5
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 1.9e-140 502.7 278 91.7
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.4e-140 502.3 277 92.8
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 2.4e-140 502.3 277 92.4
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 4.2e-140 501.5 280 92.1
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 7.1e-140 500.7 280 91.4
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 7.1e-140 500.7 277 92.4
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 9.3e-140 500.4 277 92.4
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 9.3e-140 500.4 277 92.4
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 1.2e-139 500.0 279 91.8
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 1.2e-139 500.0 280 92.5
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 1.6e-139 499.6 280 91.8
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 2.1e-139 499.2 280 91.8
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 2.7e-139 498.8 277 92.4
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 2.7e-139 498.8 280 91.1
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 3.5e-139 498.4 277 92.4
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 4.6e-139 498.0 280 92.1
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 4.6e-139 498.0 277 92.1
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 4.6e-139 498.0 280 91.8
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 1.0e-138 496.9 280 90.4
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 1.0e-138 496.9 280 91.8
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.0e-138 496.9 277 92.1
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 1.0e-138 496.9 280 91.4
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 1.0e-138 496.9 277 91.0
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 1.3e-138 496.5 280 90.7
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 1.3e-138 496.5 279 91.4
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 1.3e-138 496.5 279 91.4
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 2.3e-138 495.7 280 90.4
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 2.3e-138 495.7 280 91.8
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 3.0e-138 495.4 280 91.4
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 3.9e-138 495.0 280 91.4
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 6.7e-138 494.2 280 90.7
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 8.7e-138 493.8 277 91.3
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 8.7e-138 493.8 280 90.4
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 1.1e-137 493.4 280 90.0
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 1.5e-137 493.0 278 90.6
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.9e-137 492.7 280 90.4
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.9e-137 492.7 277 90.6
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 1.9e-137 492.7 280 90.4
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 1.9e-137 492.7 277 91.0
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 2.5e-137 492.3 280 90.0
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 3.3e-137 491.9 280 90.0
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 3.3e-137 491.9 277 91.3
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 3.3e-137 491.9 279 90.3
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 3.3e-137 491.9 280 88.9
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 4.3e-137 491.5 280 89.3
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 4.3e-137 491.5 280 89.3
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 5.6e-137 491.1 277 91.3
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 5.6e-137 491.1 277 90.3
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 5.6e-137 491.1 280 90.4
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 5.6e-137 491.1 277 91.0
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 7.4e-137 490.7 280 88.6
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 7.4e-137 490.7 277 91.0
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 7.4e-137 490.7 276 91.3
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 9.6e-137 490.3 277 90.6
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 9.6e-137 490.3 277 90.3
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 9.6e-137 490.3 280 91.8
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 9.6e-137 490.3 279 90.0
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 9.6e-137 490.3 277 90.3
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 1.3e-136 490.0 279 90.3
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 1.3e-136 490.0 279 90.7
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 1.3e-136 490.0 280 89.3
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 1.6e-136 489.6 278 89.6
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 1.6e-136 489.6 280 91.1
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 2.1e-136 489.2 278 89.9
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 3.7e-136 488.4 278 89.6
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 4.8e-136 488.0 277 90.6
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 4.8e-136 488.0 278 89.6
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 8.1e-136 487.3 279 88.9
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 8.1e-136 487.3 277 90.3
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 8.1e-136 487.3 280 88.6
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 1.1e-135 486.9 280 88.9
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 1.1e-135 486.9 277 89.9
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 1.1e-135 486.9 280 89.3
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 1.4e-135 486.5 277 89.5
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 1.4e-135 486.5 279 90.0
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 1.8e-135 486.1 279 88.9
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 3.1e-135 485.3 278 89.9
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 3.1e-135 485.3 276 89.5
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 4.0e-135 485.0 280 88.9
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 4.0e-135 485.0 278 88.8
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 4.0e-135 485.0 278 88.8
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 5.3e-135 484.6 280 88.2
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 6.9e-135 484.2 280 90.0
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 6.9e-135 484.2 276 89.9
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 9.0e-135 483.8 280 88.2
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 1.2e-134 483.4 279 88.5
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 1.5e-134 483.0 279 88.9
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 2.0e-134 482.6 277 88.8
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 3.4e-134 481.9 295 85.4
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 3.4e-134 481.9 277 88.8
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 4.5e-134 481.5 278 89.6
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 5.8e-134 481.1 278 89.6
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 5.8e-134 481.1 277 88.4
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 5.8e-134 481.1 305 83.9
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 7.6e-134 480.7 278 89.2
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 7.6e-134 480.7 278 89.2
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 7.6e-134 480.7 278 88.8
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 1.0e-133 480.3 279 88.2
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 1.3e-133 479.9 278 88.8
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 1.3e-133 479.9 278 89.2
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 88.8
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 1.7e-133 479.6 278 89.2
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 2.2e-133 479.2 293 85.3
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 3.8e-133 478.4 278 88.5
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 3.8e-133 478.4 278 88.8
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 3.8e-133 478.4 278 88.8
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 6.5e-133 477.6 281 87.9
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 6.5e-133 477.6 279 87.8
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 6.5e-133 477.6 279 87.8
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.2e-131 473.4 287 86.8
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 5.1e-130 468.0 264 90.9
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 2.5e-129 465.7 279 86.0
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 9.6e-129 463.8 301 82.7
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 6.2e-128 461.1 279 83.9
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 1.7e-125 453.0 260 87.7
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.7e-125 453.0 255 90.6
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 1.9e-124 449.5 278 82.7
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 5.5e-124 448.0 276 84.8
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.1e-123 446.0 277 85.6
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 1.9e-121 439.5 279 80.3
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 2.2e-120 436.0 279 77.8
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 5.9e-118 427.9 233 92.7
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 6.5e-117 424.5 242 90.5
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 2.8e-112 409.1 236 86.9
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 1.8e-111 406.4 278 73.0
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 2.6e-110 402.5 230 89.1
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 3.2e-108 395.6 278 71.6
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 5.1e-106 388.3 278 71.6
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 1.3e-104 383.6 277 75.1
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 3.8e-93 345.5 277 70.8
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 5.0e-93 345.1 192 90.1
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 1.5e-89 333.6 278 68.7
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 1.2e-78 297.4 173 88.4
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 5.7e-73 278.5 280 53.2
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 3.3e-68 262.7 147 89.1
Haze_26747 Corylus avellana HOM05D004007 ORTHO05D005127 2.1e-59 233.4 188 61.7
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 2.5e-52 209.9 197 64.0
TAR365G0472 Trochodendron aralioides HOM05D004007 ORTHO05D022233 1.3e-45 187.6 113 88.5
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 2.3e-45 186.8 115 80.9
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.1e-44 184.5 135 71.1
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 1.5e-44 184.1 157 63.1
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 4.2e-39 166.0 99 82.8
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 5.4e-39 165.6 284 37.0
Lj2C1145T6 Lonicera japonica HOM05D004007 ORTHO05D022233 3.0e-37 159.8 157 61.1
Lj2C1146T3 Lonicera japonica HOM05D004007 ORTHO05D022233 3.9e-37 159.5 157 60.5
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 2.5e-36 156.8 95 80.0
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 4.0e-34 149.4 83 88.0
FvH4_2g21030 Fragaria vesca HOM05D004007 ORTHO05D022233 5.5e-15 85.9 50 86.0
Cpa.g.sc165.34 Carica papaya HOM05D004007 ORTHO05D022233 7.9e-14 82.0 49 87.8
Lalb_Chr21g0314011 Lupinus albus HOM05D004007 ORTHO05D022233 2.8e-11 73.6 40 92.5
Haze_26311 Corylus avellana HOM05D002944 ORTHO05D003377 3.1e-10 70.1 279 30.1
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 1.6e-06 57.8 59 44.1


User provided reference genes

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