Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 1.2e-276 956.1 560 100.0
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 1.8e-158 563.5 543 63.7
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 2.9e-137 493.0 499 56.1
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 1.0e-134 484.6 341 73.0
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 4.0e-134 482.6 355 71.0
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 1.2e-133 481.1 529 53.7
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.5e-133 480.7 545 52.1
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 4.4e-133 479.2 528 53.0
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 2.2e-132 476.9 354 70.1
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 3.7e-132 476.1 501 54.5
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 8.3e-132 474.9 536 51.7
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 1.4e-131 474.2 343 72.0
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 1.4e-131 474.2 337 71.8
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 4.1e-131 472.6 342 71.6
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.0e-131 471.9 556 57.9
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 1.2e-130 471.1 531 62.7
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 2.0e-130 470.3 345 71.6
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 2.0e-130 470.3 527 53.1
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 2.7e-130 469.9 567 58.6
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 3.5e-130 469.5 350 70.0
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 1.0e-129 468.0 353 69.7
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 3.0e-129 466.5 362 67.1
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.0e-129 466.5 546 57.9
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.9e-129 466.1 546 55.3
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 3.9e-129 466.1 350 69.4
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 3.9e-129 466.1 530 52.6
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 8.6e-129 464.9 350 70.3
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 1.1e-128 464.5 539 50.6
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 1.5e-128 464.2 503 53.9
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 1.9e-128 463.8 351 69.8
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 1.9e-128 463.8 341 71.8
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 2.5e-128 463.4 343 70.6
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 2.5e-128 463.4 343 68.8
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 2.5e-128 463.4 345 69.3
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 3.3e-128 463.0 505 53.9
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 3.3e-128 463.0 346 68.5
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 4.3e-128 462.6 346 69.9
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 5.6e-128 462.2 511 54.6
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 7.3e-128 461.8 331 71.9
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 1.2e-127 461.1 554 50.2
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 1.6e-127 460.7 343 69.1
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 2.1e-127 460.3 345 67.8
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 2.8e-127 459.9 340 69.1
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 3.6e-127 459.5 347 68.9
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 4.7e-127 459.1 528 51.9
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 6.2e-127 458.8 530 51.7
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 6.2e-127 458.8 344 69.5
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 1.1e-126 458.0 520 51.3
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 1.4e-126 457.6 344 69.5
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 1.4e-126 457.6 286 82.9
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 1.4e-126 457.6 286 82.9
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 1.4e-126 457.6 527 51.2
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 4.0e-126 456.1 339 68.4
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 8.9e-126 454.9 334 69.2
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 8.9e-126 454.9 343 68.5
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 1.5e-125 454.1 341 68.6
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 1.5e-125 454.1 341 68.6
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.5e-125 454.1 563 58.4
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 2.0e-125 453.8 340 69.4
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 4.4e-125 452.6 339 69.0
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 7.5e-125 451.8 537 51.8
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 9.8e-125 451.4 333 69.4
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 1.3e-124 451.1 333 69.7
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 1.7e-124 450.7 343 67.3
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 1.7e-124 450.7 335 68.7
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 2.2e-124 450.3 337 69.1
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 2.2e-124 450.3 335 69.3
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 2.2e-124 450.3 337 67.1
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 2.9e-124 449.9 339 68.7
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 3.7e-124 449.5 341 67.7
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 4.9e-124 449.1 282 81.6
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 1.1e-123 448.0 533 51.4
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.1e-123 448.0 340 67.1
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 1.1e-123 448.0 465 54.6
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 1.9e-123 447.2 351 66.1
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 3.2e-123 446.4 349 67.0
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 1.2e-122 444.5 543 50.6
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 2.0e-122 443.7 549 50.5
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 3.5e-122 443.0 353 65.7
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.6e-122 442.6 563 58.4
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 3.9e-121 439.5 315 72.1
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 3.9e-121 439.5 309 73.5
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 5.6e-120 435.6 518 50.8
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 1.1e-118 431.4 335 65.7
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 2.3e-118 430.3 347 65.4
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 2.6e-117 426.8 351 63.0
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 5.8e-117 425.6 359 63.2
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 1.0e-113 414.8 560 47.3
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 3.9e-113 412.9 328 66.5
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 2.5e-112 410.2 310 69.0
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 5.6e-112 409.1 334 62.6
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 1.1e-110 404.8 349 61.9
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 6.8e-110 402.1 280 73.9
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 2.7e-106 390.2 342 61.7
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 2.4e-102 377.1 342 61.1
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 3.0e-97 360.1 262 70.6
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 1.6e-74 284.6 317 48.6
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 2.3e-73 280.8 353 46.7
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 3.9e-73 280.0 335 50.1
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 1.8e-70 271.2 176 76.1
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 1.1e-64 251.9 272 52.9
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 5.7e-64 249.6 179 70.4
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 5.0e-60 236.5 213 62.0
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 1.0e-49 202.2 192 56.8
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 3.0e-49 200.7 333 40.5
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 3.3e-48 197.2 148 73.0
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 3.3e-48 197.2 287 43.2
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 7.7e-45 186.0 300 39.7
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 1.0e-44 185.7 137 65.7
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.9e-44 184.1 147 69.4
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 5.7e-40 169.9 285 38.2
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 1.2e-26 125.6 289 34.6
Lalb_Chr09g0331551 Lupinus albus HOM05D005801 ORTHO05D008555 1.9e-19 101.7 85 58.8
EL10Ac8g19871 Beta vulgaris HOM05D005801 ORTHO05D008555 2.8e-18 97.8 87 62.1
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 4.7e-18 97.1 91 51.6
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 1.9e-14 85.1 229 30.1
BcaC04g20246 Brassica carinata HOM05D005801 ORTHO05D016715 9.2e-14 82.8 74 54.1
BolC9t57462H Brassica oleracea HOM05D005801 ORTHO05D016715 9.2e-14 82.8 74 54.1
C09p45950 Brassica napus HOM05D005801 ORTHO05D016715 1.6e-13 82.0 74 52.7
BcaB08g34890 Brassica carinata HOM05D005801 ORTHO05D008555 1.0e-12 79.3 71 63.4
BraA07t30260Z Brassica rapa HOM05D005801 ORTHO05D013666 5.0e-12 77.0 71 52.1
A07p26140 Brassica napus HOM05D005801 ORTHO05D013666 6.6e-12 76.6 71 52.1
BcaC03g16316 Brassica carinata HOM05D005801 ORTHO05D016715 2.1e-10 71.6 72 47.2
C03p54440 Brassica napus HOM05D005801 ORTHO05D041341 8.0e-10 69.7 57 57.9
BolC3t17730H Brassica oleracea HOM05D005801 ORTHO05D041341 8.0e-10 69.7 57 57.9
BcaC04g22492 Brassica carinata HOM05D005801 ORTHO05D016715 1.2e-08 65.9 65 52.3
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 1.3e-07 62.4 176 34.7
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 3.7e-07 60.8 180 35.0
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 6.4e-07 60.1 184 32.1
BcaB07g33268 Brassica carinata HOM05D005801 ORTHO05D016715 8.3e-07 59.7 46 60.9
BcaB07g33439 Brassica carinata HOM05D005801 ORTHO05D016715 1.1e-06 59.3 74 45.9
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 3.2e-06 57.8 235 27.7
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 3.2e-06 57.8 170 31.8
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 4.1e-06 57.4 236 28.0
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 4.1e-06 57.4 175 32.6
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 4.1e-06 57.4 188 33.5
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 4.1e-06 57.4 243 27.6
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 5.4e-06 57.0 211 32.2
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 5.4e-06 57.0 170 32.9
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 7.0e-06 56.6 174 33.3
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 9.2e-06 56.2 177 31.1
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 9.2e-06 56.2 178 34.3


User provided reference genes

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