Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 2526.1 1286 100.0
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1951.0 1295 77.1
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1906.7 1298 74.8
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1656.0 1330 64.3
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1647.9 1333 64.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1639.4 1329 64.5
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1637.5 1317 63.0
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1630.2 1335 62.8
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1623.6 1325 63.2
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1620.9 1329 63.7
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1598.2 1332 62.5
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1597.8 1323 62.5
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1597.0 1330 62.5
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1595.5 1323 62.1
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1592.8 1334 62.6
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1591.2 1324 61.8
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1591.2 1334 62.1
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1589.3 1325 62.3
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1588.9 1323 62.1
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1585.9 1329 61.8
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1585.5 1322 62.6
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1580.5 1336 62.7
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1575.5 1334 61.6
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1572.8 1347 60.8
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1571.2 1276 63.3
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1565.8 1331 61.6
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1562.0 1326 60.0
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1560.8 1329 61.8
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1555.4 1324 59.5
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1550.4 1330 61.6
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1539.6 1339 59.9
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1326 60.6
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1533.9 1330 60.0
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1532.7 1241 63.3
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1531.9 1326 60.1
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1528.8 1330 59.9
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1527.7 1332 58.9
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1527.3 1326 59.2
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1526.9 1330 59.8
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1526.1 1330 59.8
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1525.4 1326 60.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1521.1 1247 63.8
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1520.8 1330 59.6
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1520.4 1320 58.6
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1519.2 1326 59.0
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1517.7 1335 60.3
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1506.1 1329 59.4
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1505.3 1245 62.7
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1505.3 1342 58.6
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1504.6 1334 59.2
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1504.6 1328 59.5
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1504.2 1328 59.0
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1502.6 1326 59.0
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1502.6 1331 58.7
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1498.8 1311 58.8
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1493.8 1330 58.0
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1491.5 1341 58.2
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1491.5 1324 59.6
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1484.9 1332 58.7
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1480.7 1328 57.8
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1478.0 1255 60.2
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1476.5 1331 58.2
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1468.4 1329 58.5
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1466.4 1246 60.4
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1460.7 1324 57.6
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1460.7 1323 58.2
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1458.7 1273 59.8
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1445.6 1319 58.6
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1434.5 1274 60.9
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1433.3 1320 56.4
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1428.3 1319 57.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1414.4 1324 56.5
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1412.9 1327 56.4
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1412.1 1324 56.6
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1411.4 1324 56.1
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1407.9 1327 55.8
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1399.4 1326 56.4
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1394.8 1327 55.7
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1393.6 1328 55.6
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1392.9 1357 54.5
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1387.9 1331 55.8
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1377.5 1191 59.2
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1359.7 1105 64.6
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1355.5 1095 64.6
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1345.1 1339 52.4
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1317.8 1327 51.7
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1317.4 1322 53.6
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1313.9 1131 60.6
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1289.6 1563 47.7
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1259.6 1350 50.7
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1243.4 1111 57.4
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1237.2 1305 53.3
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1236.9 1319 51.0
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1233.0 1159 56.3
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1231.9 1096 58.3
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1119.8 851 67.6
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1113.2 1325 49.0
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1083.9 949 60.2
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 8.1e-308 1060.8 1257 47.3
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.6e-303 1046.6 757 70.4
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 9.0e-291 1004.2 905 58.8
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 8.3e-244 848.2 1379 37.8
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.8e-230 803.9 842 49.3
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 4.9e-228 795.8 1275 38.0
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 4.0e-222 776.2 1143 39.1
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 6.4e-220 768.8 1155 39.5
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 9.6e-200 701.8 801 49.4
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 8.0e-154 549.3 1512 29.4
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 2.2e-135 488.0 458 56.1
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 9.8e-128 462.6 357 66.1
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 1.3e-116 425.6 378 59.0
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 2.4e-86 325.1 1481 25.7
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 1.1e-78 299.7 1538 24.8
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 3.2e-78 298.1 308 55.2
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 5.5e-70 270.8 1286 25.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.5e-62 244.2 196 67.9
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 3.5e-61 241.5 238 51.3
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 2.2e-50 205.7 305 41.0
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.4e-49 202.2 167 66.5
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 5.5e-46 191.0 1352 23.6
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 9.1e-41 173.7 132 67.4
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 6.5e-39 167.5 122 70.5
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 9.1e-33 147.1 239 38.9
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 8.5e-31 140.6 260 36.2
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 5.5e-30 137.9 136 55.9
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 8.0e-29 134.0 290 37.6


User provided reference genes

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