Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 0.0e+00 1206.4 608 100.0
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 0.0e+00 1080.5 616 89.1
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 8.0e-306 1053.1 611 87.4
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 8.0e-298 1026.5 620 83.5
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.0e-297 1026.2 595 85.2
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 1.8e-297 1025.4 616 84.3
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 5.2e-297 1023.8 621 82.8
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 3.4e-296 1021.1 594 84.2
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 2.2e-295 1018.5 594 84.0
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 2.9e-295 1018.1 615 83.3
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 3.7e-295 1017.7 618 82.5
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 8.3e-295 1016.5 620 83.5
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 8.3e-295 1016.5 624 81.9
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 2.4e-294 1015.0 612 83.0
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 9.2e-294 1013.1 612 83.0
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.6e-293 1012.3 612 83.0
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 2.0e-293 1011.9 617 82.2
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 4.6e-293 1010.7 614 82.7
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 4.6e-293 1010.7 558 88.7
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 7.8e-293 1010.0 567 88.0
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 2.3e-292 1008.4 596 84.4
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 1.9e-291 1005.4 602 82.9
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 2.8e-290 1001.5 616 81.3
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 4.7e-290 1000.7 582 83.7
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 4.0e-289 997.7 615 80.5
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 8.9e-289 996.5 609 82.1
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 5.8e-288 993.8 615 80.3
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 1.7e-287 992.3 619 80.9
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 2.2e-287 991.9 632 80.1
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 6.4e-287 990.3 609 82.1
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 8.3e-287 989.9 626 80.4
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 1.1e-286 989.6 606 81.4
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 1.4e-286 989.2 623 80.9
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 1.4e-286 989.2 585 83.4
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 1.4e-286 989.2 609 81.6
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 3.2e-286 988.0 592 82.4
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 4.1e-286 987.6 608 80.6
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 4.1e-286 987.6 607 80.9
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 1.2e-285 986.1 613 80.4
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 2.1e-285 985.3 611 80.5
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 3.5e-285 984.6 550 88.2
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 4.6e-285 984.2 589 82.7
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 7.8e-285 983.4 606 80.7
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 1.0e-284 983.0 611 80.2
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 1.3e-284 982.6 605 80.8
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 1.3e-284 982.6 612 81.2
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 3.0e-284 981.5 614 80.3
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 8.6e-284 979.9 611 80.4
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 1.1e-283 979.5 608 79.8
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 1.5e-283 979.2 614 80.5
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 1.5e-283 979.2 614 80.3
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 1.5e-283 979.2 558 84.9
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 1.5e-283 979.2 567 84.0
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 1.9e-283 978.8 604 80.0
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 1.9e-283 978.8 609 81.3
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 3.3e-283 978.0 583 82.2
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 3.3e-283 978.0 588 82.0
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 4.3e-283 977.6 613 80.3
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 4.3e-283 977.6 613 80.4
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 4.3e-283 977.6 586 81.9
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 5.6e-283 977.2 611 79.2
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 5.6e-283 977.2 588 81.8
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 5.6e-283 977.2 602 79.7
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 9.5e-283 976.5 611 80.4
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 9.5e-283 976.5 626 79.1
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 1.2e-282 976.1 611 80.0
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 1.2e-282 976.1 610 79.7
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 1.2e-282 976.1 613 79.3
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 1.2e-282 976.1 610 81.0
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 3.6e-282 974.5 651 76.5
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 3.6e-282 974.5 605 79.8
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 3.6e-282 974.5 616 80.2
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 1.1e-281 973.0 613 79.6
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 1.4e-281 972.6 588 80.8
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 1.4e-281 972.6 588 80.8
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 1.8e-281 972.2 616 80.0
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.8e-281 972.2 587 81.4
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 2.3e-281 971.8 615 79.8
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 2.3e-281 971.8 615 79.8
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 3.1e-281 971.5 609 80.3
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 3.1e-281 971.5 588 81.1
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 3.1e-281 971.5 609 80.1
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 4.0e-281 971.1 609 79.8
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 4.0e-281 971.1 558 84.8
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 6.8e-281 970.3 615 80.3
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 1.2e-280 969.5 635 78.7
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 1.2e-280 969.5 558 84.6
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 2.6e-280 968.4 610 79.0
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 3.4e-280 968.0 615 79.7
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 3.4e-280 968.0 615 79.7
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 4.4e-280 967.6 609 80.1
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 4.4e-280 967.6 609 80.1
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 4.4e-280 967.6 610 78.5
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 1.3e-279 966.1 587 81.1
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 2.9e-279 964.9 574 82.6
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 3.8e-279 964.5 608 79.4
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 2.4e-278 961.8 601 80.7
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 2.4e-278 961.8 605 79.0
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 7.1e-278 960.3 612 79.4
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 6.0e-277 957.2 608 78.5
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 6.0e-277 957.2 642 76.8
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 7.8e-277 956.8 629 77.7
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 5.1e-276 954.1 603 79.1
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 1.9e-275 952.2 574 81.0
GSVIVG01029073001 Vitis vinifera HOM05D003979 ORTHO05D005530 3.3e-275 951.4 527 87.5
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 4.3e-275 951.0 641 75.8
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 6.9e-273 943.7 628 77.2
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 1.4e-270 936.0 686 71.9
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 3.5e-269 931.4 609 76.8
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 2.5e-267 925.2 574 79.8
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 1.4e-265 919.5 564 78.0
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 5.8e-264 914.1 581 76.8
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 6.4e-263 910.6 558 79.9
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 5.4e-262 907.5 620 75.5
SGA_v2.0_scaffold31G12595 Striga asiatica HOM05D003979 ORTHO05D005530 8.7e-260 900.2 539 82.6
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 5.6e-259 897.5 557 75.9
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 4.9e-255 884.4 556 79.1
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 7.1e-254 880.6 590 73.1
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 3.0e-252 875.2 630 72.9
HPP92_025762 Vanilla planifolia HOM05D003979 ORTHO05D005530 4.8e-250 867.8 527 80.8
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 3.2e-246 855.1 623 71.7
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 1.6e-242 842.8 597 70.7
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 5.1e-236 821.2 612 69.6
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 4.8e-234 814.7 572 68.9
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 3.2e-230 802.0 561 68.6
unitig_899.g15534 Utricularia gibba HOM05D003979 ORTHO05D005530 1.5e-224 783.1 490 80.6
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 1.1e-222 776.9 490 78.0
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 2.6e-219 765.8 490 76.5
CDE04G1626 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 3.5e-216 755.4 433 85.9
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 2.7e-213 745.7 483 77.8
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 1.4e-212 743.4 548 65.7
Gohir.A10G121600 Gossypium hirsutum HOM05D003979 ORTHO05D005530 1.2e-208 730.3 426 83.3
HPP92_025735 Vanilla planifolia HOM05D003979 ORTHO05D005530 1.6e-208 729.9 490 76.5
SEGI_04002 Sequoiadendron giganteum HOM05D003979 ORTHO05D005530 1.2e-205 720.3 433 80.6
Cfa024863 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.2e-203 713.8 565 61.8
HPP92_025731 Vanilla planifolia HOM05D003979 ORTHO05D005530 2.0e-200 703.0 422 82.7
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 1.5e-190 670.2 403 83.1
Atru.chr4.1774 Acer truncatum HOM05D003979 ORTHO05D005530 5.2e-172 608.6 433 72.1
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.6e-168 597.0 601 52.9
Eucgr.H02826 Eucalyptus grandis HOM05D003979 ORTHO05D005530 2.1e-157 560.1 312 86.9
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 1.0e-143 514.6 384 70.3
Eucgr.C02488 Eucalyptus grandis HOM05D003979 ORTHO05D005530 3.4e-131 473.0 339 74.0
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 1.6e-128 464.2 286 83.6
Manes.03G150102 Manihot esculenta HOM05D003979 ORTHO05D005530 1.4e-105 387.9 277 68.6
TPR.G30672 Trifolium pratense HOM05D003979 ORTHO05D005530 3.1e-92 343.6 216 76.9
Cfa023448 Carpinus fangiana HOM05D003979 ORTHO05D123299 1.7e-74 284.6 557 33.0
CAN.G12.22 Capsicum annuum HOM05D003979 ORTHO05D005530 3.8e-74 283.5 208 72.6
vmacro00506 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 2.5e-73 280.8 155 85.8
Eucgr.H02825 Eucalyptus grandis HOM05D003979 ORTHO05D015566 1.5e-70 271.6 150 86.7
Cfa020039 Carpinus fangiana HOM05D003979 ORTHO05D015566 2.2e-61 241.1 131 87.0
Duzib268G0265 Durio zibethinus HOM05D003979 ORTHO05D015566 1.6e-59 235.0 133 82.0
QL07p012436 Quercus lobata HOM05D003979 ORTHO05D005530 1.2e-54 218.8 126 81.7
QL06p023466 Quercus lobata HOM05D003979 ORTHO05D015566 2.7e-51 207.6 114 83.3
PGSC0003DMG400028636 Solanum tuberosum HOM05D003979 ORTHO05D015566 1.3e-50 205.3 115 84.3
Oeu022341.1 Olea europaea HOM05D003979 ORTHO05D049433 3.9e-50 203.8 178 62.9
Lsat_1_v5_gn_4_162440 Lactuca sativa HOM05D003979 ORTHO05D015566 1.5e-49 201.8 109 90.8
THA.LOC104809102 Tarenaya hassleriana HOM05D003979 ORTHO05D049433 1.4e-47 195.3 116 86.2
Eucgr.C02482 Eucalyptus grandis HOM05D003979 ORTHO05D015566 6.8e-47 193.0 115 78.3
Gohir.D02G124900 Gossypium hirsutum HOM05D003979 ORTHO05D005530 5.8e-46 189.9 105 81.9
Gorai.005G140500 Gossypium raimondii HOM05D003979 ORTHO05D005530 1.2e-43 182.2 146 63.7
Oeu006718.2 Olea europaea HOM05D003979 ORTHO05D005530 3.1e-39 167.5 251 45.4
CDE04G0146 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 9.0e-39 166.0 120 69.2
TPR.G30661 Trifolium pratense HOM05D003979 ORTHO05D005530 9.9e-38 162.5 196 51.0
TWI36G0080 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 1.3e-32 145.6 127 59.8
Lsat_1_v5_gn_5_133441 Lactuca sativa HOM05D003979 ORTHO05D015566 7.1e-28 129.8 116 62.1
CAN.G12.21 Capsicum annuum HOM05D003979 ORTHO05D015566 1.8e-26 125.2 61 96.7
CAN.G12.20 Capsicum annuum HOM05D003979 ORTHO05D015566 2.5e-25 121.3 70 78.6
SMO361G0618 Selaginella moellendorffii HOM05D003979 ORTHO05D015566 4.5e-22 110.5 212 36.3
TPR.G35859 Trifolium pratense HOM05D003979 ORTHO05D015566 1.9e-20 105.1 56 92.9
Aqoxy226s001 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 1.1e-15 89.4 179 30.7
HPP92_025734 Vanilla planifolia HOM05D003979 ORTHO05D005530 3.1e-15 87.8 91 54.9
TAR362G1054 Trochodendron aralioides HOM05D000447 ORTHO05D000315 4.0e-15 87.4 67 62.7
unitig_899.g15535 Utricularia gibba HOM05D003979 ORTHO05D005530 1.5e-09 68.9 86 52.3


User provided reference genes

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