Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 0.0e+00 1331.2 781 100.0
ECA233G0830 Erigeron canadensis HOM05D007241 ORTHO05D009142 3.1e-116 423.7 433 62.6
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 4.9e-106 389.8 267 72.7
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 7.8e-104 382.5 267 72.3
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.3e-82 312.0 286 55.2
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 1.1e-81 308.9 281 55.5
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 1.1e-81 308.9 286 54.9
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 7.1e-81 306.2 286 54.2
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 2.1e-80 304.7 294 54.1
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 6.0e-80 303.1 283 54.8
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 7.9e-80 302.8 288 54.2
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.3e-79 302.0 286 54.2
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.5e-78 298.5 288 53.5
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.9e-78 298.1 274 54.4
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 2.5e-78 297.7 280 53.9
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 3.3e-78 297.4 288 51.7
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 9.6e-78 295.8 288 53.1
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 1.3e-77 295.4 289 51.9
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 6.2e-77 293.1 289 52.2
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 8.2e-77 292.7 272 54.4
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 4.0e-76 290.4 275 55.6
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 5.3e-76 290.0 267 54.7
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 5.3e-76 290.0 288 52.8
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 9.0e-76 289.3 291 51.9
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 2.6e-75 287.7 285 51.6
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 2.6e-75 287.7 286 51.4
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 3.4e-75 287.3 274 52.2
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.4e-75 287.3 280 51.4
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 7.6e-75 286.2 281 50.9
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 1.3e-74 285.4 289 52.6
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 2.9e-74 284.3 282 51.8
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 3.8e-74 283.9 298 50.3
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 1.1e-73 282.3 272 54.8
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 1.4e-73 282.0 286 50.3
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.5e-73 281.2 304 49.3
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.2e-72 278.9 280 51.4
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 2.7e-72 277.7 285 48.8
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 1.0e-71 275.8 287 50.5
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 1.0e-71 275.8 281 51.6
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.3e-71 275.4 286 52.1
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 1.8e-71 275.0 286 51.4
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 2.3e-71 274.6 274 52.9
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 2.3e-71 274.6 289 48.4
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 3.9e-71 273.9 274 51.1
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 5.1e-71 273.5 282 47.5
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 6.7e-71 273.1 286 51.7
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 8.7e-71 272.7 292 46.9
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 1.1e-70 272.3 281 47.7
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 2.5e-70 271.2 288 49.7
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 2.5e-70 271.2 283 51.2
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 3.3e-70 270.8 285 47.4
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 3.3e-70 270.8 270 51.1
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 4.3e-70 270.4 290 47.2
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.6e-69 268.5 289 47.1
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 1.6e-69 268.5 287 47.0
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 1.6e-69 268.5 290 47.2
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 2.1e-69 268.1 286 46.5
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.8e-69 267.7 280 50.4
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 3.7e-69 267.3 279 50.5
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.7e-69 267.3 279 50.2
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 4.8e-69 266.9 286 46.2
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 4.8e-69 266.9 284 49.6
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 6.3e-69 266.5 279 50.5
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 8.2e-69 266.2 286 49.0
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 1.4e-68 265.4 272 49.3
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 1.8e-68 265.0 284 50.0
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 2.4e-68 264.6 284 50.4
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 6.9e-68 263.1 288 48.6
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 9.0e-68 262.7 286 45.8
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 2.0e-67 261.5 266 50.8
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 4.5e-67 260.4 280 50.4
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 5.9e-67 260.0 332 44.3
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 2.2e-66 258.1 268 50.4
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 2.2e-66 258.1 287 48.8
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 3.8e-66 257.3 283 49.1
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 6.5e-66 256.5 289 49.5
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 1.9e-65 255.0 283 46.6
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 1.9e-65 255.0 286 47.2
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 4.2e-65 253.8 291 47.8
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 5.5e-65 253.4 273 47.6
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 5.1e-63 246.9 291 45.7
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 1.3e-61 242.3 295 42.7
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 3.1e-60 237.7 340 43.2
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 2.6e-59 234.6 250 48.8
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 1.7e-58 231.9 254 48.0
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 9.4e-57 226.1 331 40.2
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 1.1e-54 219.2 288 41.3
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 1.4e-52 212.2 287 43.2
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 1.1e-49 202.6 277 39.4
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 2.3e-47 194.9 280 41.8
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 1.7e-45 188.7 226 43.8
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 3.7e-45 187.6 218 45.4
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 6.3e-45 186.8 277 37.9
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 7.2e-41 173.3 201 45.8
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 1.5e-38 165.6 275 39.3
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 1.5e-25 122.5 97 61.9
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 2.3e-23 115.2 133 51.1
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 2.3e-23 115.2 272 27.9
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 2.8e-21 108.2 263 27.8
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.4e-20 105.1 83 57.8
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 1.1e-17 96.3 207 32.9
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 5.6e-17 94.0 84 51.2
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-13 81.6 264 25.4
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 2.9e-13 81.6 133 41.4
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 3.2e-12 78.2 70 48.6
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 8.6e-10 70.1 54 55.6
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 4.7e-08 64.3 86 38.4
ECA232G2530 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.8e-07 60.5 61 49.2
ECA232G4572 Erigeron canadensis HOM05D000006 ORTHO05D010593 6.8e-07 60.5 57 52.6
ECA236G3039 Erigeron canadensis HOM05D000006 ORTHO05D188225 6.8e-07 60.5 57 52.6
ECA234G3375 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.6e-06 58.5 57 50.9
ECA234G4605 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.8e-06 57.4 57 50.9
ECA248G1471 Erigeron canadensis HOM05D000006 ORTHO05D000091 7.5e-06 57.0 51 52.9
ECA248G3329 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.5e-06 57.0 51 52.9


User provided reference genes

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