Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1683 Erigeron canadensis HOM05D003777 ORTHO05D004690 0.0e+00 1170.6 665 100.0
Lsat_1_v5_gn_2_96961 Lactuca sativa HOM05D003777 ORTHO05D004690 1.4e-279 966.1 666 79.7
HanXRQChr04g0126141 Helianthus annuus HOM05D003777 ORTHO05D004690 2.2e-256 889.0 636 77.2
Nitab4.5_0000492g0120 Nicotiana tabacum HOM05D003777 ORTHO05D004690 2.3e-245 852.4 666 70.3
Nitab4.5_0002026g0090 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.5e-244 849.7 666 70.0
Solyc11g062270.2 Solanum lycopersicum HOM05D003777 ORTHO05D004690 1.2e-243 846.7 634 72.4
Sopen11g024250 Solanum pennellii HOM05D003777 ORTHO05D004690 1.1e-242 843.6 634 72.2
CSS0004768 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 6.8e-242 840.9 650 73.1
MSTRG.12471 Avicennia marina HOM05D003777 ORTHO05D004690 5.8e-241 837.8 630 72.4
Oeu015952.1 Olea europaea HOM05D003777 ORTHO05D004690 5.8e-241 837.8 665 70.4
Dinv18168 Davidia involucrata HOM05D003777 ORTHO05D004690 7.6e-241 837.4 678 69.6
vmacro01091 Vaccinium macrocarpon HOM05D003777 ORTHO05D004690 9.9e-241 837.0 681 71.7
DCAR_021624 Daucus carota HOM05D003777 ORTHO05D004690 1.6e-238 829.7 635 70.4
Peaxi162Scf00029g02527 Petunia axillaris HOM05D003777 ORTHO05D004690 8.7e-237 823.9 633 70.6
Actinidia08096 Actinidia chinensis HOM05D003777 ORTHO05D004690 2.5e-236 822.4 649 70.7
CAN.G487.1 Capsicum annuum HOM05D003777 ORTHO05D004690 2.5e-236 822.4 665 69.0
SGA_v2.0_scaffold247G44863 Striga asiatica HOM05D003777 ORTHO05D004690 4.0e-234 815.1 663 69.1
QL03p055332 Quercus lobata HOM05D003777 ORTHO05D004690 9.0e-234 813.9 613 72.1
Potri.006G216400 Populus trichocarpa HOM05D003777 ORTHO05D004690 6.4e-232 807.7 672 68.2
CiPaw.05G173500 Carya illinoinensis HOM05D003777 ORTHO05D004690 1.1e-231 807.0 622 71.5
DCAR_021625 Daucus carota HOM05D003777 ORTHO05D004690 4.6e-230 801.6 635 68.3
Sabra06G0166800 Salix brachista HOM05D003777 ORTHO05D004690 7.8e-230 800.8 636 68.6
TAR374G1267 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.5e-228 796.6 639 68.9
Thecc.02G272700 Theobroma cacao HOM05D003777 ORTHO05D004690 2.5e-228 795.8 655 67.3
Phvul.002G176900 Phaseolus vulgaris HOM05D003777 ORTHO05D004690 4.3e-228 795.0 671 66.6
Hma1.2p1_0079F.1_g041650 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 5.6e-228 794.7 668 67.7
TAR374G0928 Trochodendron aralioides HOM05D003777 ORTHO05D004690 9.6e-228 793.9 639 68.7
Dinv11003 Davidia involucrata HOM05D003777 ORTHO05D004690 2.1e-227 792.7 668 66.6
Aa31LG4G12090 Aethionema arabicum HOM05D003777 ORTHO05D004690 5.8e-225 784.6 665 68.9
Glyma.05G144700 Glycine max HOM05D003777 ORTHO05D004690 1.4e-223 780.0 629 68.0
Rhsim12G0035800 Rhododendron simsii HOM05D003777 ORTHO05D004690 1.4e-223 780.0 752 61.3
THA.LOC104825526 Tarenaya hassleriana HOM05D003777 ORTHO05D004690 3.2e-223 778.9 669 66.8
PSO170G4787 Papaver somniferum HOM05D003777 ORTHO05D004690 1.2e-222 776.9 673 66.4
TWI36G1566 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 2.7e-222 775.8 633 67.3
Manes.12G016400 Manihot esculenta HOM05D003777 ORTHO05D004690 6.0e-222 774.6 671 68.6
CANSAT01G1767 Cannabis sativa HOM05D003777 ORTHO05D004690 7.9e-222 774.2 629 66.8
PSO063G1619 Papaver somniferum HOM05D003777 ORTHO05D004690 2.3e-221 772.7 626 68.5
TWI75G0300 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 2.3e-221 772.7 632 67.6
Cpa.g.sc86.2 Carica papaya HOM05D003777 ORTHO05D004690 3.0e-221 772.3 659 68.4
Psat7g080080 Pisum sativum HOM05D003777 ORTHO05D004690 3.0e-221 772.3 639 67.0
GSVIVG01010320001 Vitis vinifera HOM05D003777 ORTHO05D004690 1.9e-220 769.6 623 67.4
Hund25014 Selenicereus undatus HOM05D003777 ORTHO05D004690 4.3e-220 768.5 634 68.3
Sed0005823 Sechium edule HOM05D003777 ORTHO05D004690 5.6e-220 768.1 630 67.6
Sp5g22670 Schrenkiella parvula HOM05D003777 ORTHO05D004690 1.3e-219 766.9 624 67.9
Migut.D00587 Erythranthe guttata HOM05D003777 ORTHO05D004690 2.8e-219 765.8 608 69.9
Ca_18071_v3 Cicer arietinum L. HOM05D003777 ORTHO05D004690 3.7e-219 765.4 671 65.0
Lj4g0007172 Lotus japonicus HOM05D003777 ORTHO05D004690 3.7e-219 765.4 671 65.1
Duzib248G0478 Durio zibethinus HOM05D003777 ORTHO05D004690 3.1e-218 762.3 676 64.5
Cfa009302 Carpinus fangiana HOM05D003777 ORTHO05D004690 9.0e-218 760.8 672 66.2
BcaC08g46176 Brassica carinata HOM05D003777 ORTHO05D004690 2.0e-217 759.6 669 64.6
C06p42580 Brassica napus HOM05D003777 ORTHO05D004690 2.0e-217 759.6 669 64.6
BolC6t39181H Brassica oleracea HOM05D003777 ORTHO05D004690 2.0e-217 759.6 669 64.6
BcaB03g15177 Brassica carinata HOM05D003777 ORTHO05D004690 7.6e-217 757.7 669 64.6
Glyma.08G101100 Glycine max HOM05D003777 ORTHO05D004690 1.7e-216 756.5 629 66.9
Thhalv10018246m.g Eutrema salsugineum HOM05D003777 ORTHO05D004690 4.9e-216 755.0 676 64.5
A07p32470 Brassica napus HOM05D003777 ORTHO05D004690 6.4e-216 754.6 669 65.3
Medtr8g079990 Medicago truncatula HOM05D003777 ORTHO05D004690 8.4e-216 754.2 633 66.4
Aqoxy5G03557 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.4e-215 753.4 677 65.1
Gohir.D05G312600 Gossypium hirsutum HOM05D003777 ORTHO05D004690 1.9e-215 753.1 674 64.8
MD13G1110100 Malus domestica HOM05D003777 ORTHO05D004690 4.2e-215 751.9 673 62.6
AT1G67680 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 5.5e-215 751.5 677 63.5
Duzib268G0959 Durio zibethinus HOM05D003777 ORTHO05D004690 1.2e-214 750.4 674 62.8
AL2G26380 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 1.6e-214 750.0 665 65.7
CsaV3_5G030580 Cucumis sativus L. HOM05D003777 ORTHO05D004690 1.6e-214 750.0 673 63.7
PGR102G0273 Punica granatum HOM05D003777 ORTHO05D004690 1.6e-214 750.0 670 64.5
Gohir.A05G311500 Gossypium hirsutum HOM05D003777 ORTHO05D004690 2.3e-213 746.1 670 64.3
Gorai.009G334100 Gossypium raimondii HOM05D003777 ORTHO05D004690 2.3e-213 746.1 674 65.1
MELO3C011898.2 Cucumis melo HOM05D003777 ORTHO05D004690 8.7e-213 744.2 642 65.6
Manes.13G014300 Manihot esculenta HOM05D003777 ORTHO05D004690 8.7e-213 744.2 622 66.2
Atru.chr11.2223 Acer truncatum HOM05D003777 ORTHO05D004690 9.6e-212 740.7 674 63.9
arahy.Tifrunner.gnm1.ann1.SED4J7 Arachis hypogaea HOM05D003777 ORTHO05D004690 9.6e-212 740.7 704 60.9
MD16G1110000 Malus domestica HOM05D003777 ORTHO05D004690 9.6e-212 740.7 673 62.0
ClCG05G026250 Citrullus lanatus HOM05D003777 ORTHO05D004690 1.1e-210 737.3 675 62.8
unitig_744.g24046 Utricularia gibba HOM05D003777 ORTHO05D004690 1.8e-210 736.5 681 63.0
arahy.Tifrunner.gnm1.ann1.9WV3XJ Arachis hypogaea HOM05D003777 ORTHO05D004690 3.1e-210 735.7 669 63.1
VMungo0251G0828 Vigna mungo HOM05D003777 ORTHO05D004690 5.3e-210 734.9 712 60.3
Ah.10g034950 Amaranthus hybridus HOM05D003777 ORTHO05D004690 1.2e-209 733.8 630 64.6
arahy.Tifrunner.gnm1.ann1.238UV6 Arachis hypogaea HOM05D003777 ORTHO05D004690 1.2e-209 733.8 669 62.5
Lalb_Chr07g0187251 Lupinus albus HOM05D003777 ORTHO05D004690 4.5e-209 731.9 669 61.9
CARHR060270 Cardamine hirsuta HOM05D003777 ORTHO05D004690 5.8e-209 731.5 628 65.0
TPR.G17105 Trifolium pratense HOM05D003777 ORTHO05D004690 1.0e-208 730.7 671 62.7
Nitab4.5_0002757g0020 Nicotiana tabacum HOM05D003777 ORTHO05D004690 1.3e-208 730.3 634 65.8
Carub.0002s1406 Capsella rubella HOM05D003777 ORTHO05D004690 2.9e-208 729.2 669 63.1
arahy.Tifrunner.gnm1.ann1.35MH8V Arachis hypogaea HOM05D003777 ORTHO05D004690 3.8e-208 728.8 684 63.2
A07p34190 Brassica napus HOM05D003777 ORTHO05D004690 6.5e-208 728.0 669 62.9
AUR62017151 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.0e-205 720.7 632 63.4
Actinidia30683 Actinidia chinensis HOM05D003777 ORTHO05D004690 1.5e-204 716.8 651 64.8
Eucgr.B03455 Eucalyptus grandis HOM05D003777 ORTHO05D004690 3.7e-203 712.2 675 60.9
FvH4_4g24580 Fragaria vesca HOM05D003777 ORTHO05D004690 2.6e-201 706.1 670 61.2
FAN12G3799 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.6e-201 706.1 670 61.2
FAN07G0030 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.2e-200 703.0 669 60.5
RcHm_v2.0_Chr4g0431581 Rosa chinensis HOM05D003777 ORTHO05D004690 5.0e-200 701.8 670 61.3
RcHm_v2.0_Chr4g0431561 Rosa chinensis HOM05D003777 ORTHO05D004690 6.5e-200 701.4 670 61.2
EL10Ac9g22111 Beta vulgaris HOM05D003777 ORTHO05D004690 1.4e-199 700.3 632 63.0
AUR62035656 Chenopodium quinoa HOM05D003777 ORTHO05D004690 2.5e-199 699.5 631 60.9
FAN17G2971 Fragaria x ananassa HOM05D003777 ORTHO05D004690 1.6e-198 696.8 651 61.4
CSS0018349 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 2.1e-198 696.4 509 72.7
FAN22G1648 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.3e-197 693.0 670 60.3
AT1G67650 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 1.1e-196 690.6 671 58.4
Prupe.1G234800 Prunus persica HOM05D003777 ORTHO05D004690 1.5e-196 690.3 574 66.7
Ciclev10030955m.g Citrus clementina HOM05D003777 ORTHO05D004690 6.3e-195 684.9 629 62.6
TPR.G27143 Trifolium pratense HOM05D003777 ORTHO05D004690 1.0e-192 677.6 560 65.5
MBI11_g31858_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 5.5e-191 671.8 686 58.2
CDE07G0923 Ceratophyllum demersum HOM05D003777 ORTHO05D004690 3.0e-189 666.0 676 59.3
COL.COLO4_23602 Corchorus olitorius HOM05D003777 ORTHO05D004690 2.6e-188 662.9 641 59.6
HPP92_012793 Vanilla planifolia HOM05D003777 ORTHO05D004690 2.5e-183 646.4 629 58.8
BraA07t31048Z Brassica rapa HOM05D003777 ORTHO05D004690 4.2e-183 645.6 566 63.4
Nitab4.5_0001925g0190 Nicotiana tabacum HOM05D003777 ORTHO05D004690 2.7e-182 642.9 620 60.3
PGSC0003DMG400032494 Solanum tuberosum HOM05D003777 ORTHO05D004690 2.4e-178 629.8 474 70.9
Os01g0889000 Oryza sativa ssp. japonica HOM05D003777 ORTHO05D004690 5.3e-178 628.6 674 57.7
BcaB03g15368 Brassica carinata HOM05D003777 ORTHO05D004690 1.1e-175 620.9 665 56.7
ATR0824G106 Amborella trichopoda HOM05D003777 ORTHO05D004690 4.2e-175 619.0 671 54.4
Sed0021346 Sechium edule HOM05D003777 ORTHO05D004690 5.7e-172 608.6 556 62.8
Sc04g0009890 Simmondsia chinensis HOM05D003777 ORTHO05D004690 8.3e-171 604.7 506 66.2
Lj2C633G4 Lonicera japonica HOM05D003777 ORTHO05D004690 5.0e-168 595.5 506 65.0
Carub.0002s1402 Capsella rubella HOM05D003777 ORTHO05D004690 1.0e-165 587.8 510 65.7
AL2G26340 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 6.3e-163 578.6 629 54.5
BolC2t08468H Brassica oleracea HOM05D003777 ORTHO05D004690 8.6e-152 541.6 611 54.0
CSS0034811 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 6.2e-142 508.8 449 68.2
Mapoly0007s0138 Marchantia polymorpha HOM05D003777 ORTHO05D004690 4.4e-140 502.7 647 46.2
C06p38540 Brassica napus HOM05D003777 ORTHO05D004690 7.5e-140 501.9 462 61.5
Lalb_Chr12g0206451 Lupinus albus HOM05D003777 ORTHO05D004690 1.1e-138 498.0 460 61.5
Zm00001eb145240 Zea mays HOM05D003777 ORTHO05D004690 2.3e-136 490.3 492 58.3
Lalb_Chr12g0206431 Lupinus albus HOM05D003777 ORTHO05D004690 6.6e-136 488.8 453 61.4
SEGI_14731 Sequoiadendron giganteum HOM05D003777 ORTHO05D004690 1.2e-134 484.6 555 50.1
SHI17928 Sapria himalayana HOM05D003777 ORTHO05D004690 7.5e-132 475.3 632 47.8
Pp3c19_7700 Physcomitrium patens HOM05D003777 ORTHO05D004690 9.9e-132 474.9 644 44.6
BolC6t38947H Brassica oleracea HOM05D003777 ORTHO05D004690 1.9e-119 434.1 411 60.3
SMO356G0370 Selaginella moellendorffii HOM05D003777 ORTHO05D004690 1.3e-110 404.8 597 43.4
C02p23330 Brassica napus HOM05D003777 ORTHO05D004690 6.2e-110 402.5 422 55.9
Lalb_Chr12g0206401 Lupinus albus HOM05D003777 ORTHO05D004690 7.6e-108 395.6 334 62.6
CBR_g26341 Chara braunii HOM05D003777 ORTHO05D004690 2.9e-107 393.7 663 40.6
TAR622G1358 Trochodendron aralioides HOM05D003777 ORTHO05D004690 3.9e-104 383.3 338 65.4
ECA238G3243 Erigeron canadensis HOM05D003777 ORTHO05D004690 1.6e-89 334.7 224 79.9
AUR62017138 Chenopodium quinoa HOM05D003777 ORTHO05D004690 1.1e-79 302.0 315 54.0
CSS0039153 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 6.3e-70 269.6 195 74.4
Oeu007469.1 Olea europaea HOM05D003777 ORTHO05D004690 1.8e-69 268.1 325 51.4
MCO13G157 Micromonas commoda HOM05D003777 ORTHO05D004690 1.7e-67 261.5 654 34.6
BraA07t30871Z Brassica rapa HOM05D003777 ORTHO05D004690 9.4e-66 255.8 209 65.6
PGSC0003DMG400024128 Solanum tuberosum HOM05D003777 ORTHO05D004690 3.5e-60 237.3 188 66.5
Hma1.2p1_0075F.1_g039220 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 4.7e-57 226.9 243 54.3
TAR622G0547 Trochodendron aralioides HOM05D003777 ORTHO05D004690 4.4e-55 220.3 169 70.4
PGSC0003DMG400017991 Solanum tuberosum HOM05D003777 ORTHO05D004690 8.3e-54 216.1 174 64.4
Solyc10g044443.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 1.1e-53 215.7 177 67.8
Cre03.g182500 Chlamydomonas reinhardtii HOM05D003777 ORTHO05D004690 3.1e-53 214.2 714 30.7
PGSC0003DMG400024126 Solanum tuberosum HOM05D003777 ORTHO05D004690 2.7e-52 211.1 169 72.8
Nn4g21997 Nelumbo nucifera HOM05D003777 ORTHO05D004690 1.3e-51 208.8 168 70.2
Sopen01g018830 Solanum pennellii HOM05D003777 ORTHO05D004690 2.5e-50 204.5 177 64.4
PRCOL_00006597 Prasinoderma coloniale HOM05D003777 ORTHO05D004690 9.1e-45 186.0 620 30.3
Psat5g044680 Pisum sativum HOM05D003777 ORTHO05D004690 1.3e-43 182.2 155 63.2
Psat3g102200 Pisum sativum HOM05D003777 ORTHO05D004690 2.3e-43 181.4 155 62.6
Sopen01g018820 Solanum pennellii HOM05D003777 ORTHO05D004690 4.0e-40 170.6 174 54.0
Aqoxy6G02118 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 2.6e-39 167.9 127 70.9
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 7.5e-39 166.4 117 76.1
CAN.G1295.1 Capsicum annuum HOM05D003777 ORTHO05D004690 1.3e-35 155.6 149 63.1
Aqoxy6G02120 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 3.6e-33 147.5 136 64.7
Lalb_Chr12g0206421 Lupinus albus HOM05D003777 ORTHO05D004690 1.6e-28 132.1 111 64.0
CAN.G1310.4 Capsicum annuum HOM05D003777 ORTHO05D004690 2.3e-27 128.3 92 76.1
Lalb_Chr12g0206411 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-27 128.3 92 73.9
Lalb_Chr12g0206441 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-27 128.3 92 73.9
Lalb_Chr12g0206461 Lupinus albus HOM05D003777 ORTHO05D004690 2.3e-27 128.3 92 73.9
Psat3g103880 Pisum sativum HOM05D003777 ORTHO05D004690 4.7e-25 120.6 187 41.2
MBI11_g11081_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 2.9e-22 111.3 98 62.2
MBI11_g45427_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 1.9e-21 108.6 95 63.2
Aqoxy6G02119 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 3.5e-20 104.4 99 56.6
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 3.9e-19 100.9 95 57.9
TAR622G0255 Trochodendron aralioides HOM05D003777 ORTHO05D004690 8.6e-19 99.8 104 53.8
C06p38550 Brassica napus HOM05D003777 ORTHO05D004690 1.2e-17 95.9 112 63.4
BcaC03g14865 Brassica carinata HOM05D003777 ORTHO05D004690 1.6e-17 95.5 67 71.6
PGSC0003DMG400024133 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.8e-16 92.0 58 81.0
Solyc01g047580.1 Solanum lycopersicum HOM05D003777 ORTHO05D004690 3.1e-16 91.3 120 49.2
Psat4g130680 Pisum sativum HOM05D003777 ORTHO05D037365 4.0e-16 90.9 105 48.6
SHI17930 Sapria himalayana HOM05D003777 ORTHO05D012379 3.4e-15 87.8 87 54.0
BcaC03g14858 Brassica carinata HOM05D003777 ORTHO05D004690 4.9e-14 84.0 51 78.4
Nitab4.5_0004629g0100 Nicotiana tabacum HOM05D003777 ORTHO05D004690 6.4e-14 83.6 67 64.2
SEGI_18986 Sequoiadendron giganteum HOM05D003777 ORTHO05D000001 3.3e-10 71.2 82 46.3
Actinidia09282 Actinidia chinensis HOM05D003777 ORTHO05D004690 1.2e-07 62.8 155 36.8
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 1.5e-07 62.4 48 77.1
Cfa022335 Carpinus fangiana HOM05D003777 ORTHO05D004690 4.9e-06 57.4 625 22.1


User provided reference genes

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