Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 1.3e-279 965.7 461 100.0
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 5.6e-227 790.8 454 83.5
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 3.7e-218 761.5 455 79.1
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 9.0e-217 756.9 456 78.1
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 2.7e-213 745.3 455 76.0
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 4.8e-210 734.6 458 73.6
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 5.3e-209 731.1 458 72.9
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 2.5e-206 722.2 455 74.1
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 5.5e-206 721.1 455 73.6
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 9.3e-206 720.3 455 72.5
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 1.2e-205 719.9 455 73.0
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 1.2e-205 719.9 455 73.0
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 2.1e-205 719.2 455 73.0
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 2.7e-205 718.8 455 73.6
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 1.0e-204 716.8 455 72.5
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 1.3e-204 716.5 455 73.0
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 2.3e-204 715.7 455 72.5
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 3.9e-204 714.9 452 72.1
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 5.1e-204 714.5 455 72.1
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 2.5e-203 712.2 455 72.3
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 7.4e-203 710.7 473 70.2
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 9.7e-203 710.3 455 74.3
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 1.3e-202 709.9 469 70.4
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 1.6e-202 709.5 455 71.4
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 2.2e-202 709.1 455 72.1
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 4.8e-202 708.0 457 72.9
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 6.3e-202 707.6 454 72.2
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 1.4e-201 706.4 456 71.1
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 1.8e-201 706.1 457 72.6
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 3.1e-201 705.3 455 71.0
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 5.3e-201 704.5 455 71.9
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 6.9e-201 704.1 463 71.7
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 6.9e-201 704.1 455 71.9
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 4.5e-200 701.4 455 70.5
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 7.7e-200 700.7 455 71.6
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 1.0e-199 700.3 456 71.9
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 1.7e-199 699.5 446 72.4
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 2.9e-199 698.7 455 71.0
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 6.5e-199 697.6 454 71.8
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 6.5e-199 697.6 455 70.1
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 1.4e-198 696.4 461 70.5
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 1.4e-198 696.4 470 69.6
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 1.9e-198 696.0 457 72.0
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 1.9e-198 696.0 455 71.9
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 4.2e-198 694.9 455 70.8
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 7.2e-198 694.1 452 70.4
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 1.2e-197 693.3 444 71.4
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 2.7e-197 692.2 457 69.8
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 3.6e-197 691.8 446 71.5
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 3.6e-197 691.8 516 64.3
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 7.9e-197 690.6 455 70.5
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 1.0e-196 690.3 457 70.7
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 3.9e-196 688.3 455 72.3
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 1.5e-195 686.4 447 71.1
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 1.5e-195 686.4 458 69.9
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 2.5e-195 685.6 446 70.9
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 3.3e-195 685.3 483 66.3
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 4.3e-195 684.9 447 70.5
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 7.4e-195 684.1 446 70.9
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 7.4e-195 684.1 446 70.4
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 1.3e-194 683.3 455 70.5
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 2.2e-194 682.6 484 67.8
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 8.2e-194 680.6 464 68.1
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 1.8e-193 679.5 490 66.3
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 6.9e-193 677.6 478 67.8
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 3.4e-192 675.2 465 67.3
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 4.5e-192 674.9 462 68.2
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 2.5e-190 669.1 498 65.9
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 5.5e-190 667.9 463 67.8
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 1.2e-189 666.8 455 69.5
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 1.6e-189 666.4 400 78.0
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 5.1e-188 661.4 487 64.7
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 9.7e-187 657.1 444 69.1
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 1.3e-186 656.8 492 65.2
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 2.6e-184 649.0 479 64.7
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 3.6e-181 638.6 455 65.9
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 1.0e-180 637.1 434 68.9
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 1.3e-178 630.2 540 58.7
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 1.0e-175 620.5 470 65.3
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 2.1e-173 612.8 441 63.5
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 6.8e-172 607.8 480 61.5
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 3.4e-171 605.5 455 64.0
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 3.4e-171 605.5 455 63.1
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 2.8e-170 602.4 480 61.0
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 6.3e-170 601.3 461 62.5
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 5.9e-168 594.7 456 61.6
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 2.1e-165 586.3 449 60.6
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 2.7e-165 585.9 447 60.9
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 1.4e-164 583.6 354 78.2
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 4.0e-164 582.0 471 60.5
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 2.4e-161 572.8 455 63.1
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 7.7e-160 567.8 447 60.0
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 1.4e-156 557.0 351 74.1
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 3.5e-152 542.3 455 59.8
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 8.6e-151 537.7 354 71.8
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 1.9e-150 536.6 353 71.7
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 3.3e-150 535.8 351 72.1
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 8.0e-149 531.2 359 70.8
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 3.5e-144 515.8 391 63.7
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 1.9e-142 510.0 459 55.8
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 9.2e-137 491.1 456 53.9
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 2.1e-133 479.9 334 67.4
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 1.3e-130 470.7 320 67.5
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 2.1e-125 453.4 458 51.5
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 2.1e-120 436.8 319 67.1
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 5.8e-115 418.7 447 47.9
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 8.4e-114 414.8 255 72.5
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 7.1e-113 411.8 431 47.1
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 5.1e-111 405.6 335 61.2
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 4.8e-109 399.1 358 55.9
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 1.1e-108 397.9 281 64.8
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 2.0e-107 393.7 287 63.8
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 1.6e-96 357.5 324 56.5
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 1.6e-80 304.3 186 71.5
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 2.2e-69 267.3 461 37.5
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.0e-63 246.9 162 71.0
Lj8A254T79 Lonicera japonica HOM05D005885 ORTHO05D008127 1.5e-41 174.9 110 70.9
SEGI_03642 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 3.0e-39 167.2 94 75.5
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 6.2e-32 142.9 252 33.7
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 9.8e-30 135.6 93 64.5
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 6.0e-27 126.3 70 84.3
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 1.5e-25 121.7 203 36.5
Ah.02g116200 Amaranthus hybridus HOM05D005885 ORTHO05D008127 2.1e-24 117.9 74 70.3
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 2.1e-24 117.9 128 48.4
Cc08_g13290 Coffea canephora HOM05D005885 ORTHO05D008127 3.6e-24 117.1 70 72.9
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.8e-23 114.8 71 77.5
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 3.4e-14 84.0 71 59.2
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 7.6e-14 82.8 54 72.2
RcHm_v2.0_Chr7g0201231 Rosa chinensis HOM05D005885 ORTHO05D342624 7.3e-09 66.2 49 61.2
BolC2t10740H Brassica oleracea HOM05D005885 ORTHO05D023940 7.6e-06 56.2 48 54.2


User provided reference genes

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